PDB Short entry for 6FMU HEADER FLAVOPROTEIN 02-FEB-18 6FMU TITLE THIOREDOXIN GLUTATHIONE REDUCTASE FROM SCHISTOSOME MANSONI IN COMPLEX TITLE 2 WITH 2-[4-(4-AMINO-BUTYL)-PIPERAZIN-1-YL]-ETHANOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOREDOXIN GLUTATHIONE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.8.1.9; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHISTOSOMA MANSONI; SOURCE 3 ORGANISM_TAXID: 6183; SOURCE 4 GENE: SMP_048430; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FRAGMENT, ALLOSTERIC POCKET, SCHISTOSOMIASIS, FAD/NAD LINKED KEYWDS 2 REDUCTASE, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR I.SILVESTRI,F.FATA,A.E.MIELE,G.BOUMIS,D.L.WILLIAMS,F.ANGELUCCI REVDAT 4 17-JAN-24 6FMU 1 REMARK REVDAT 3 30-MAR-22 6FMU 1 REMARK REVDAT 2 29-AUG-18 6FMU 1 JRNL REVDAT 1 06-JUN-18 6FMU 0 JRNL AUTH I.SILVESTRI,H.LYU,F.FATA,G.BOUMIS,A.E.MIELE,M.ARDINI, JRNL AUTH 2 R.IPPOLITI,A.BELLELLI,A.JADHAV,W.A.LEA,A.SIMEONOV,Q.CHENG, JRNL AUTH 3 E.S.J.ARNER,G.R.J.THATCHER,P.A.PETUKHOV,D.L.WILLIAMS, JRNL AUTH 4 F.ANGELUCCI JRNL TITL FRAGMENT-BASED DISCOVERY OF A REGULATORY SITE IN THIOREDOXIN JRNL TITL 2 GLUTATHIONE REDUCTASE ACTING AS "DOORSTOP" FOR NADPH ENTRY. JRNL REF ACS CHEM. BIOL. V. 13 2190 2018 JRNL REFN ESSN 1554-8937 JRNL PMID 29800515 JRNL DOI 10.1021/ACSCHEMBIO.8B00349 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 71553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 3516 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.1376 - 5.2594 1.00 2779 170 0.1724 0.1969 REMARK 3 2 5.2594 - 4.1764 1.00 2751 145 0.1289 0.1377 REMARK 3 3 4.1764 - 3.6490 1.00 2743 144 0.1352 0.1378 REMARK 3 4 3.6490 - 3.3156 1.00 2730 154 0.1444 0.1691 REMARK 3 5 3.3156 - 3.0781 1.00 2739 141 0.1545 0.1892 REMARK 3 6 3.0781 - 2.8967 1.00 2736 163 0.1551 0.1848 REMARK 3 7 2.8967 - 2.7516 1.00 2736 130 0.1514 0.1681 REMARK 3 8 2.7516 - 2.6319 1.00 2723 163 0.1510 0.1858 REMARK 3 9 2.6319 - 2.5306 1.00 2676 170 0.1534 0.1759 REMARK 3 10 2.5306 - 2.4433 1.00 2749 119 0.1499 0.2014 REMARK 3 11 2.4433 - 2.3669 1.00 2747 151 0.1475 0.1758 REMARK 3 12 2.3669 - 2.2993 1.00 2737 127 0.1539 0.1974 REMARK 3 13 2.2993 - 2.2387 1.00 2723 126 0.1526 0.1864 REMARK 3 14 2.2387 - 2.1841 1.00 2752 101 0.1606 0.1955 REMARK 3 15 2.1841 - 2.1345 1.00 2701 165 0.1550 0.1943 REMARK 3 16 2.1345 - 2.0891 0.99 2726 131 0.1684 0.1843 REMARK 3 17 2.0891 - 2.0473 0.99 2673 153 0.1700 0.2303 REMARK 3 18 2.0473 - 2.0086 1.00 2747 132 0.1745 0.2164 REMARK 3 19 2.0086 - 1.9728 0.99 2682 134 0.1725 0.2047 REMARK 3 20 1.9728 - 1.9393 0.99 2710 132 0.1729 0.2049 REMARK 3 21 1.9393 - 1.9081 0.99 2711 150 0.1815 0.2305 REMARK 3 22 1.9081 - 1.8787 0.99 2703 140 0.1910 0.2302 REMARK 3 23 1.8787 - 1.8511 0.99 2727 129 0.1943 0.2371 REMARK 3 24 1.8511 - 1.8250 0.99 2677 126 0.2083 0.2375 REMARK 3 25 1.8250 - 1.8003 0.96 2659 120 0.2409 0.2925 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4672 REMARK 3 ANGLE : 1.081 6333 REMARK 3 CHIRALITY : 0.059 722 REMARK 3 PLANARITY : 0.007 795 REMARK 3 DIHEDRAL : 12.797 2778 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.8495 25.6353 51.5854 REMARK 3 T TENSOR REMARK 3 T11: 0.2759 T22: 0.2099 REMARK 3 T33: 0.3185 T12: -0.0737 REMARK 3 T13: 0.0945 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 0.0914 L22: 0.0384 REMARK 3 L33: 0.0589 L12: 0.0024 REMARK 3 L13: -0.0748 L23: -0.0552 REMARK 3 S TENSOR REMARK 3 S11: -0.0010 S12: 0.0520 S13: 0.0772 REMARK 3 S21: -0.2152 S22: 0.0874 S23: -0.1405 REMARK 3 S31: 0.0068 S32: -0.0224 S33: 0.0004 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): 135.6867 -9.3376 61.6524 REMARK 3 T TENSOR REMARK 3 T11: 0.1645 T22: 0.1755 REMARK 3 T33: 0.1852 T12: 0.0015 REMARK 3 T13: -0.0024 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.0499 L22: 0.0428 REMARK 3 L33: 0.0572 L12: -0.0239 REMARK 3 L13: 0.0097 L23: 0.0400 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: -0.0656 S13: -0.0781 REMARK 3 S21: -0.0548 S22: 0.0306 S23: -0.0524 REMARK 3 S31: -0.0108 S32: 0.0300 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 219 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.5213 6.7312 70.8275 REMARK 3 T TENSOR REMARK 3 T11: 0.1929 T22: 0.2482 REMARK 3 T33: 0.2709 T12: -0.0185 REMARK 3 T13: -0.0282 T23: -0.0486 REMARK 3 L TENSOR REMARK 3 L11: 0.0179 L22: 0.0340 REMARK 3 L33: 0.0076 L12: -0.0212 REMARK 3 L13: 0.0026 L23: -0.0112 REMARK 3 S TENSOR REMARK 3 S11: -0.0501 S12: -0.1419 S13: 0.0444 REMARK 3 S21: 0.0420 S22: 0.0629 S23: -0.1597 REMARK 3 S31: 0.0752 S32: 0.0942 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 262 THROUGH 593 ) REMARK 3 ORIGIN FOR THE GROUP (A): 125.1325 3.0415 71.5286 REMARK 3 T TENSOR REMARK 3 T11: 0.1514 T22: 0.1473 REMARK 3 T33: 0.1284 T12: 0.0180 REMARK 3 T13: -0.0021 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.3084 L22: 0.2194 REMARK 3 L33: 0.4056 L12: -0.0596 REMARK 3 L13: 0.0080 L23: -0.0732 REMARK 3 S TENSOR REMARK 3 S11: -0.0374 S12: -0.1103 S13: 0.0255 REMARK 3 S21: 0.0335 S22: 0.0401 S23: -0.0043 REMARK 3 S31: -0.0393 S32: -0.0146 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FMU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008613. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JAN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71563 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.70000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2V6O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS 0.1M PH = 7.0; PEG 3350 20%; REMARK 280 KI 0.2 M, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 71.61750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.12850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 71.61750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 51.12850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 240.68520 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 108.01946 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 PRO A 3 REMARK 465 ALA A 4 REMARK 465 ASP A 5 REMARK 465 SER A 594 REMARK 465 GLY A 595 REMARK 465 CYS A 596 REMARK 465 CYS A 597 REMARK 465 GLY A 598 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 13 O HOH A 701 1.52 REMARK 500 HG1 THR A 26 OD2 ASP A 51 1.58 REMARK 500 O HOH A 825 O HOH A 1178 1.82 REMARK 500 O HOH A 1051 O HOH A 1234 1.94 REMARK 500 O HOH A 1185 O HOH A 1225 2.06 REMARK 500 NZ LYS A 13 O HOH A 701 2.07 REMARK 500 O HOH A 1209 O HOH A 1214 2.10 REMARK 500 OG1 THR A 418 OD1 ASP A 420 2.17 REMARK 500 O HOH A 1131 O HOH A 1172 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 159 CA - CB - SG ANGL. DEV. = 12.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 256 45.13 -144.86 REMARK 500 ALA A 294 16.96 -146.50 REMARK 500 SER A 318 -70.53 -137.36 REMARK 500 VAL A 400 -19.33 -140.22 REMARK 500 PHE A 474 53.75 -92.35 REMARK 500 ASP A 530 53.82 -117.17 REMARK 500 HIS A 582 -22.96 -143.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DVK A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 603 DBREF 6FMU A 1 598 UNP G4V8J4 G4V8J4_SCHMA 1 598 SEQADV 6FMU CYS A 597 UNP G4V8J4 SEC 597 ENGINEERED MUTATION SEQRES 1 A 598 MET PRO PRO ALA ASP GLY THR SER GLN TRP LEU ARG LYS SEQRES 2 A 598 THR VAL ASP SER ALA ALA VAL ILE LEU PHE SER LYS THR SEQRES 3 A 598 THR CYS PRO TYR CYS LYS LYS VAL LYS ASP VAL LEU ALA SEQRES 4 A 598 GLU ALA LYS ILE LYS HIS ALA THR ILE GLU LEU ASP GLN SEQRES 5 A 598 LEU SER ASN GLY SER ALA ILE GLN LYS CYS LEU ALA SER SEQRES 6 A 598 PHE SER LYS ILE GLU THR VAL PRO GLN MET PHE VAL ARG SEQRES 7 A 598 GLY LYS PHE ILE GLY ASP SER GLN THR VAL LEU LYS TYR SEQRES 8 A 598 TYR SER ASN ASP GLU LEU ALA GLY ILE VAL ASN GLU SER SEQRES 9 A 598 LYS TYR ASP TYR ASP LEU ILE VAL ILE GLY GLY GLY SER SEQRES 10 A 598 GLY GLY LEU ALA ALA GLY LYS GLU ALA ALA LYS TYR GLY SEQRES 11 A 598 ALA LYS THR ALA VAL LEU ASP TYR VAL GLU PRO THR PRO SEQRES 12 A 598 ILE GLY THR THR TRP GLY LEU GLY GLY THR CYS VAL ASN SEQRES 13 A 598 VAL GLY CYS ILE PRO LYS LYS LEU MET HIS GLN ALA GLY SEQRES 14 A 598 LEU LEU SER HIS ALA LEU GLU ASP ALA GLU HIS PHE GLY SEQRES 15 A 598 TRP SER LEU ASP ARG SER LYS ILE SER HIS ASN TRP SER SEQRES 16 A 598 THR MET VAL GLU GLY VAL GLN SER HIS ILE GLY SER LEU SEQRES 17 A 598 ASN TRP GLY TYR LYS VAL ALA LEU ARG ASP ASN GLN VAL SEQRES 18 A 598 THR TYR LEU ASN ALA LYS GLY ARG LEU ILE SER PRO HIS SEQRES 19 A 598 GLU VAL GLN ILE THR ASP LYS ASN GLN LYS VAL SER THR SEQRES 20 A 598 ILE THR GLY ASN LYS ILE ILE LEU ALA THR GLY GLU ARG SEQRES 21 A 598 PRO LYS TYR PRO GLU ILE PRO GLY ALA VAL GLU TYR GLY SEQRES 22 A 598 ILE THR SER ASP ASP LEU PHE SER LEU PRO TYR PHE PRO SEQRES 23 A 598 GLY LYS THR LEU VAL ILE GLY ALA SER TYR VAL ALA LEU SEQRES 24 A 598 GLU CYS ALA GLY PHE LEU ALA SER LEU GLY GLY ASP VAL SEQRES 25 A 598 THR VAL MET VAL ARG SER ILE LEU LEU ARG GLY PHE ASP SEQRES 26 A 598 GLN GLN MET ALA GLU LYS VAL GLY ASP TYR MET GLU ASN SEQRES 27 A 598 HIS GLY VAL LYS PHE ALA LYS LEU CYS VAL PRO ASP GLU SEQRES 28 A 598 ILE LYS GLN LEU LYS VAL VAL ASP THR GLU ASN ASN LYS SEQRES 29 A 598 PRO GLY LEU LEU LEU VAL LYS GLY HIS TYR THR ASP GLY SEQRES 30 A 598 LYS LYS PHE GLU GLU GLU PHE GLU THR VAL ILE PHE ALA SEQRES 31 A 598 VAL GLY ARG GLU PRO GLN LEU SER LYS VAL LEU CYS GLU SEQRES 32 A 598 THR VAL GLY VAL LYS LEU ASP LYS ASN GLY ARG VAL VAL SEQRES 33 A 598 CYS THR ASP ASP GLU GLN THR THR VAL SER ASN VAL TYR SEQRES 34 A 598 ALA ILE GLY ASP ILE ASN ALA GLY LYS PRO GLN LEU THR SEQRES 35 A 598 PRO VAL ALA ILE GLN ALA GLY ARG TYR LEU ALA ARG ARG SEQRES 36 A 598 LEU PHE ALA GLY ALA THR GLU LEU THR ASP TYR SER ASN SEQRES 37 A 598 VAL ALA THR THR VAL PHE THR PRO LEU GLU TYR GLY ALA SEQRES 38 A 598 CYS GLY LEU SER GLU GLU ASP ALA ILE GLU LYS TYR GLY SEQRES 39 A 598 ASP LYS ASP ILE GLU VAL TYR HIS SER ASN PHE LYS PRO SEQRES 40 A 598 LEU GLU TRP THR VAL ALA HIS ARG GLU ASP ASN VAL CYS SEQRES 41 A 598 TYR MET LYS LEU VAL CYS ARG LYS SER ASP ASN MET ARG SEQRES 42 A 598 VAL LEU GLY LEU HIS VAL LEU GLY PRO ASN ALA GLY GLU SEQRES 43 A 598 ILE THR GLN GLY TYR ALA VAL ALA ILE LYS MET GLY ALA SEQRES 44 A 598 THR LYS ALA ASP PHE ASP ARG THR ILE GLY ILE HIS PRO SEQRES 45 A 598 THR CYS SER GLU THR PHE THR THR LEU HIS VAL THR LYS SEQRES 46 A 598 LYS SER GLY VAL SER PRO ILE VAL SER GLY CYS CYS GLY HET FAD A 601 84 HET DVK A 602 14 HET PGE A 603 24 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM DVK 2-[4-(4-AZANYLBUTYL)PIPERAZIN-1-YL]ETHANOL HETNAM PGE TRIETHYLENE GLYCOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 DVK C10 H23 N3 O FORMUL 4 PGE C6 H14 O4 FORMUL 5 HOH *553(H2 O) HELIX 1 AA1 GLY A 6 ALA A 18 1 13 HELIX 2 AA2 CYS A 28 ALA A 41 1 14 HELIX 3 AA3 ASP A 51 SER A 54 5 4 HELIX 4 AA4 ASN A 55 LYS A 68 1 14 HELIX 5 AA5 ASP A 84 ASN A 94 1 11 HELIX 6 AA6 GLU A 96 GLU A 103 1 8 HELIX 7 AA7 GLY A 116 TYR A 129 1 14 HELIX 8 AA8 GLY A 151 GLY A 158 1 8 HELIX 9 AA9 GLY A 158 PHE A 181 1 24 HELIX 10 AB1 ASP A 186 ILE A 190 5 5 HELIX 11 AB2 ASN A 193 ASN A 219 1 27 HELIX 12 AB3 GLY A 268 GLY A 273 1 6 HELIX 13 AB4 THR A 275 PHE A 280 1 6 HELIX 14 AB5 SER A 295 LEU A 308 1 14 HELIX 15 AB6 ASP A 325 HIS A 339 1 15 HELIX 16 AB7 LEU A 397 VAL A 400 5 4 HELIX 17 AB8 GLY A 432 ASN A 435 5 4 HELIX 18 AB9 LEU A 441 GLY A 459 1 19 HELIX 19 AC1 SER A 485 GLY A 494 1 10 HELIX 20 AC2 LEU A 508 ALA A 513 1 6 HELIX 21 AC3 SER A 529 ASN A 531 5 3 HELIX 22 AC4 ASN A 543 MET A 557 1 15 HELIX 23 AC5 THR A 560 THR A 567 1 8 HELIX 24 AC6 CYS A 574 THR A 580 5 7 SHEET 1 AA1 4 ALA A 46 GLU A 49 0 SHEET 2 AA1 4 VAL A 20 SER A 24 1 N SER A 24 O ILE A 48 SHEET 3 AA1 4 GLN A 74 VAL A 77 -1 O GLN A 74 N PHE A 23 SHEET 4 AA1 4 LYS A 80 GLY A 83 -1 O ILE A 82 N MET A 75 SHEET 1 AA2 6 THR A 222 LEU A 224 0 SHEET 2 AA2 6 THR A 133 LEU A 136 1 N VAL A 135 O THR A 222 SHEET 3 AA2 6 TYR A 108 ILE A 113 1 N VAL A 112 O LEU A 136 SHEET 4 AA2 6 VAL A 245 LEU A 255 1 O ILE A 254 N ILE A 113 SHEET 5 AA2 6 GLU A 235 THR A 239 -1 N VAL A 236 O ILE A 248 SHEET 6 AA2 6 LYS A 227 SER A 232 -1 N ARG A 229 O GLN A 237 SHEET 1 AA3 5 THR A 222 LEU A 224 0 SHEET 2 AA3 5 THR A 133 LEU A 136 1 N VAL A 135 O THR A 222 SHEET 3 AA3 5 TYR A 108 ILE A 113 1 N VAL A 112 O LEU A 136 SHEET 4 AA3 5 VAL A 245 LEU A 255 1 O ILE A 254 N ILE A 113 SHEET 5 AA3 5 VAL A 428 ALA A 430 1 O TYR A 429 N LEU A 255 SHEET 1 AA4 2 GLU A 259 PRO A 261 0 SHEET 2 AA4 2 ARG A 393 PRO A 395 -1 O GLU A 394 N ARG A 260 SHEET 1 AA5 4 LYS A 342 LYS A 345 0 SHEET 2 AA5 4 VAL A 312 VAL A 316 1 N VAL A 314 O ALA A 344 SHEET 3 AA5 4 THR A 289 ILE A 292 1 N VAL A 291 O THR A 313 SHEET 4 AA5 4 THR A 386 PHE A 389 1 O ILE A 388 N ILE A 292 SHEET 1 AA6 3 CYS A 347 LYS A 356 0 SHEET 2 AA6 3 LEU A 367 TYR A 374 -1 O LYS A 371 N ASP A 350 SHEET 3 AA6 3 LYS A 379 PHE A 384 -1 O PHE A 384 N LEU A 368 SHEET 1 AA7 5 THR A 471 VAL A 473 0 SHEET 2 AA7 5 TYR A 479 GLY A 483 -1 O TYR A 479 N VAL A 473 SHEET 3 AA7 5 VAL A 534 LEU A 540 -1 O LEU A 537 N CYS A 482 SHEET 4 AA7 5 CYS A 520 ARG A 527 -1 N TYR A 521 O LEU A 540 SHEET 5 AA7 5 ILE A 498 PHE A 505 -1 N GLU A 499 O CYS A 526 SSBOND 1 CYS A 154 CYS A 159 1555 1555 2.21 CISPEP 1 VAL A 72 PRO A 73 0 2.35 CISPEP 2 HIS A 571 PRO A 572 0 -5.58 SITE 1 AC1 40 ILE A 113 GLY A 114 GLY A 115 GLY A 116 SITE 2 AC1 40 SER A 117 GLY A 118 ASP A 137 TYR A 138 SITE 3 AC1 40 GLY A 152 THR A 153 CYS A 154 GLY A 158 SITE 4 AC1 40 CYS A 159 LYS A 162 ALA A 226 LYS A 227 SITE 5 AC1 40 GLY A 228 ALA A 256 THR A 257 GLY A 258 SITE 6 AC1 40 TYR A 296 VAL A 297 ARG A 393 VAL A 400 SITE 7 AC1 40 GLY A 432 ASP A 433 GLN A 440 LEU A 441 SITE 8 AC1 40 THR A 442 PRO A 443 HIS A 571 PRO A 572 SITE 9 AC1 40 HOH A 728 HOH A 797 HOH A 839 HOH A 842 SITE 10 AC1 40 HOH A 868 HOH A 880 HOH A 951 HOH A 982 SITE 1 AC2 8 GLY A 323 PHE A 324 ALA A 481 GLY A 483 SITE 2 AC2 8 HOH A 853 HOH A 870 HOH A 879 HOH A 903 SITE 1 AC3 3 TRP A 10 LEU A 53 ASN A 55 CRYST1 143.235 102.257 58.661 90.00 112.97 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006982 0.000000 0.002960 0.00000 SCALE2 0.000000 0.009779 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018516 0.00000