PDB Short entry for 6FQP HEADER TRANSCRIPTION 14-FEB-18 6FQP TITLE CRYSTAL STRUCTURE OF TALE HOMEOBOX DOMAIN TRANSCRIPTION FACTOR TGIF1 TITLE 2 WITH ITS CONSENSUS DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(P*AP*TP*TP*GP*AP*CP*AP*GP*CP*TP*GP*TP*CP*AP*AP*T)-3'); COMPND 4 CHAIN: L, M; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HOMEOBOX PROTEIN TGIF1; COMPND 8 CHAIN: A, B; COMPND 9 SYNONYM: 5'-TG-3'-INTERACTING FACTOR 1; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: N-TERMINAL 'GP' SEQUENCE COMES FROM THE PURIFICATION COMPND 12 TAG SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 GENE: TGIF1, TGIF; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HOMEOBOX, THREE-AMINO ACID LOOP EXTENSION, TGF-BETA PATHWAY, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR E.GUCA,M.J.MACIAS REVDAT 4 17-JAN-24 6FQP 1 REMARK LINK REVDAT 3 10-OCT-18 6FQP 1 JRNL REVDAT 2 29-AUG-18 6FQP 1 JRNL REVDAT 1 25-JUL-18 6FQP 0 JRNL AUTH E.GUCA,D.SUNOL,L.RUIZ,A.KONKOL,J.CORDERO,C.TORNER,E.ARAGON, JRNL AUTH 2 P.MARTIN-MALPARTIDA,A.RIERA,M.J.MACIAS JRNL TITL TGIF1 HOMEODOMAIN INTERACTS WITH SMAD MH1 DOMAIN AND JRNL TITL 2 REPRESSES TGF-BETA SIGNALING. JRNL REF NUCLEIC ACIDS RES. V. 46 9220 2018 JRNL REFN ESSN 1362-4962 JRNL PMID 30060237 JRNL DOI 10.1093/NAR/GKY680 REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 13749 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.770 REMARK 3 FREE R VALUE TEST SET COUNT : 656 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1083 REMARK 3 NUCLEIC ACID ATOMS : 656 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 68 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.280 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FQP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200007511. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972422 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13814 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.420 REMARK 200 RESOLUTION RANGE LOW (A) : 67.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.02750 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.23200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XRM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE TRIHYDRATE PH 4.5, REMARK 280 30% V/V PEG 1500, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.42550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.15750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.62400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.15750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.42550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.62400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, M, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 148 REMARK 465 PRO A 149 REMARK 465 MET A 150 REMARK 465 ASP A 151 REMARK 465 ILE A 152 REMARK 465 PRO A 153 REMARK 465 LEU A 154 REMARK 465 ASP A 155 REMARK 465 LEU A 156 REMARK 465 SER A 157 REMARK 465 SER A 158 REMARK 465 SER A 159 REMARK 465 ALA A 160 REMARK 465 GLY A 161 REMARK 465 SER A 162 REMARK 465 GLY A 163 REMARK 465 LYS A 164 REMARK 465 ARG A 165 REMARK 465 ARG A 166 REMARK 465 ARG A 167 REMARK 465 ASN A 235 REMARK 465 GLN A 236 REMARK 465 PHE A 237 REMARK 465 THR A 238 REMARK 465 ILE A 239 REMARK 465 SER A 240 REMARK 465 ARG A 241 REMARK 465 ARG A 242 REMARK 465 GLY A 243 REMARK 465 ALA A 244 REMARK 465 LYS A 245 REMARK 465 ILE A 246 REMARK 465 SER A 247 REMARK 465 GLU A 248 REMARK 465 GLY B 148 REMARK 465 PRO B 149 REMARK 465 MET B 150 REMARK 465 ASP B 151 REMARK 465 ILE B 152 REMARK 465 PRO B 153 REMARK 465 LEU B 154 REMARK 465 ASP B 155 REMARK 465 LEU B 156 REMARK 465 SER B 157 REMARK 465 SER B 158 REMARK 465 SER B 159 REMARK 465 ALA B 160 REMARK 465 GLY B 161 REMARK 465 SER B 162 REMARK 465 GLY B 163 REMARK 465 ASP B 230 REMARK 465 GLY B 231 REMARK 465 LYS B 232 REMARK 465 ASP B 233 REMARK 465 PRO B 234 REMARK 465 ASN B 235 REMARK 465 GLN B 236 REMARK 465 PHE B 237 REMARK 465 THR B 238 REMARK 465 ILE B 239 REMARK 465 SER B 240 REMARK 465 ARG B 241 REMARK 465 ARG B 242 REMARK 465 GLY B 243 REMARK 465 ALA B 244 REMARK 465 LYS B 245 REMARK 465 ILE B 246 REMARK 465 SER B 247 REMARK 465 GLU B 248 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 173 CD CE NZ REMARK 470 GLU A 174 CD OE1 OE2 REMARK 470 ARG A 180 CZ NH1 NH2 REMARK 470 ASP A 225 OD1 OD2 REMARK 470 LYS A 229 CD CE NZ REMARK 470 LYS A 232 CG CD CE NZ REMARK 470 ASP A 233 CG OD1 OD2 REMARK 470 PRO A 234 CG CD REMARK 470 LYS B 164 CG CD CE NZ REMARK 470 ARG B 168 NE CZ NH1 NH2 REMARK 470 LYS B 173 CD CE NZ REMARK 470 GLU B 174 CG CD OE1 OE2 REMARK 470 GLN B 177 OE1 NE2 REMARK 470 GLN B 195 CD OE1 NE2 REMARK 470 GLN B 202 OE1 NE2 REMARK 470 ASP B 225 OD1 OD2 REMARK 470 ARG B 228 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 229 CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 DA L 1 P C5' REMARK 480 DA M 1 P C4' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER B 201 O LEU B 206 1.43 REMARK 500 OP2 DG M 8 HZ1 LYS A 197 1.55 REMARK 500 OP2 DG L 8 HZ1 LYS B 197 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA L 14 N3 DA L 14 C4 -0.037 REMARK 500 DA L 14 N9 DA L 14 C4 -0.046 REMARK 500 DA L 15 N9 DA L 15 C4 -0.038 REMARK 500 DA M 1 N9 DA M 1 C4 -0.038 REMARK 500 DT M 3 O3' DT M 3 C3' -0.047 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA L 1 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 DT L 12 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT L 16 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DA M 1 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 DC M 6 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DG M 8 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT M 12 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 PRO A 234 C - N - CA ANGL. DEV. = 16.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 189 73.51 -150.35 REMARK 500 ALA A 190 44.51 -80.24 REMARK 500 ARG B 165 43.93 34.72 REMARK 500 ARG B 166 66.84 -107.76 REMARK 500 ASN B 189 76.53 -152.53 REMARK 500 ALA B 190 47.30 -82.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA L 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG L 8 O6 REMARK 620 2 DG M 8 O6 80.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA L 101 DBREF 6FQP L 1 16 PDB 6FQP 6FQP 1 16 DBREF 6FQP M 1 16 PDB 6FQP 6FQP 1 16 DBREF 6FQP A 150 248 UNP Q15583 TGIF1_HUMAN 150 248 DBREF 6FQP B 150 248 UNP Q15583 TGIF1_HUMAN 150 248 SEQADV 6FQP GLY A 148 UNP Q15583 EXPRESSION TAG SEQADV 6FQP PRO A 149 UNP Q15583 EXPRESSION TAG SEQADV 6FQP GLY B 148 UNP Q15583 EXPRESSION TAG SEQADV 6FQP PRO B 149 UNP Q15583 EXPRESSION TAG SEQRES 1 L 16 DA DT DT DG DA DC DA DG DC DT DG DT DC SEQRES 2 L 16 DA DA DT SEQRES 1 M 16 DA DT DT DG DA DC DA DG DC DT DG DT DC SEQRES 2 M 16 DA DA DT SEQRES 1 A 101 GLY PRO MET ASP ILE PRO LEU ASP LEU SER SER SER ALA SEQRES 2 A 101 GLY SER GLY LYS ARG ARG ARG ARG GLY ASN LEU PRO LYS SEQRES 3 A 101 GLU SER VAL GLN ILE LEU ARG ASP TRP LEU TYR GLU HIS SEQRES 4 A 101 ARG TYR ASN ALA TYR PRO SER GLU GLN GLU LYS ALA LEU SEQRES 5 A 101 LEU SER GLN GLN THR HIS LEU SER THR LEU GLN VAL CYS SEQRES 6 A 101 ASN TRP PHE ILE ASN ALA ARG ARG ARG LEU LEU PRO ASP SEQRES 7 A 101 MET LEU ARG LYS ASP GLY LYS ASP PRO ASN GLN PHE THR SEQRES 8 A 101 ILE SER ARG ARG GLY ALA LYS ILE SER GLU SEQRES 1 B 101 GLY PRO MET ASP ILE PRO LEU ASP LEU SER SER SER ALA SEQRES 2 B 101 GLY SER GLY LYS ARG ARG ARG ARG GLY ASN LEU PRO LYS SEQRES 3 B 101 GLU SER VAL GLN ILE LEU ARG ASP TRP LEU TYR GLU HIS SEQRES 4 B 101 ARG TYR ASN ALA TYR PRO SER GLU GLN GLU LYS ALA LEU SEQRES 5 B 101 LEU SER GLN GLN THR HIS LEU SER THR LEU GLN VAL CYS SEQRES 6 B 101 ASN TRP PHE ILE ASN ALA ARG ARG ARG LEU LEU PRO ASP SEQRES 7 B 101 MET LEU ARG LYS ASP GLY LYS ASP PRO ASN GLN PHE THR SEQRES 8 B 101 ILE SER ARG ARG GLY ALA LYS ILE SER GLU HET CA L 101 1 HETNAM CA CALCIUM ION FORMUL 5 CA CA 2+ FORMUL 6 HOH *68(H2 O) HELIX 1 AA1 PRO A 172 HIS A 186 1 15 HELIX 2 AA2 SER A 193 HIS A 205 1 13 HELIX 3 AA3 SER A 207 LEU A 222 1 16 HELIX 4 AA4 LEU A 222 LYS A 229 1 8 HELIX 5 AA5 PRO B 172 HIS B 186 1 15 HELIX 6 AA6 SER B 193 HIS B 205 1 13 HELIX 7 AA7 SER B 207 LEU B 222 1 16 HELIX 8 AA8 LEU B 222 LEU B 227 1 6 LINK O6 DG L 8 CA CA L 101 1555 1555 2.66 LINK CA CA L 101 O6 DG M 8 1555 1555 2.34 SITE 1 AC1 3 DG L 8 DC L 9 DG M 8 CRYST1 50.851 67.248 102.315 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019665 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014870 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009774 0.00000