PDB Short entry for 6GPL HEADER LYASE 06-JUN-18 6GPL TITLE CRYSTAL STRUCTURE OF HUMAN GDP-D-MANNOSE 4,6-DEHYDRATASE IN COMPLEX TITLE 2 WITH GDP-4K6D-MAN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GDP-MANNOSE 4,6 DEHYDRATASE; COMPND 3 CHAIN: B, C, D, E; COMPND 4 SYNONYM: GDP-D-MANNOSE DEHYDRATASE,GMD; COMPND 5 EC: 4.2.1.47; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GMDS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.PFEIFFER,T.KROJER,C.JOHANSSON,F.VON DELFT,C.BOUNTRA,C.H.ARROWSMITH, AUTHOR 2 A.EDWARDS,B.NIDETZKY,U.OPPERMANN,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 3 (SGC) REVDAT 2 24-APR-19 6GPL 1 JRNL REVDAT 1 18-JUL-18 6GPL 0 JRNL AUTH M.PFEIFFER,C.JOHANSSON,T.KROJER,K.L.KAVANAGH,U.OPPERMANN, JRNL AUTH 2 B.NIDETZKY JRNL TITL A PARSIMONIOUS MECHANISM OF SUGAR DEHYDRATION BY HUMAN JRNL TITL 2 GDP-MANNOSE-4,6-DEHYDRATASE. JRNL REF ACS CATALYSIS V. 9 2962 2019 JRNL REFN ESSN 2155-5435 JRNL PMID 30984471 JRNL DOI 10.1021/ACSCATAL.9B00064 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 144387 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 7486 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10576 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 552 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10754 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 391 REMARK 3 SOLVENT ATOMS : 886 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.94000 REMARK 3 B22 (A**2) : -0.21000 REMARK 3 B33 (A**2) : -0.73000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.107 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.078 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.623 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11491 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 10315 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15634 ; 1.464 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 23838 ; 0.939 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1370 ; 5.969 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 526 ;35.132 ;23.783 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1839 ;12.766 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 70 ;14.051 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1698 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12850 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2440 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5490 ; 1.621 ; 2.715 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 5485 ; 1.621 ; 2.715 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6858 ; 2.386 ; 4.059 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 6858 ; 2.386 ; 4.059 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6001 ; 2.364 ; 2.923 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 6001 ; 2.364 ; 2.923 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 8777 ; 3.645 ; 4.285 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 12947 ; 5.005 ;32.092 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 12948 ; 5.005 ;32.094 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 B 23 371 C 23 371 23048 0.06 0.05 REMARK 3 2 B 21 372 D 21 372 23004 0.07 0.05 REMARK 3 3 B 23 367 E 23 367 22608 0.06 0.05 REMARK 3 4 C 23 371 D 23 371 22740 0.05 0.05 REMARK 3 5 C 23 367 E 23 367 22526 0.05 0.05 REMARK 3 6 D 23 367 E 23 367 22448 0.05 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6GPL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200009661. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 151973 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 39.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG6000, 0.1M BICINE PH 9.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.63000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.75000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.38500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.75000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.63000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.38500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 21 REMARK 465 MET B 22 REMARK 465 LYS B 70 REMARK 465 ASN B 71 REMARK 465 PRO B 72 REMARK 465 GLN B 73 REMARK 465 ALA B 74 REMARK 465 HIS B 75 REMARK 465 ILE B 76 REMARK 465 GLU B 77 REMARK 465 SER C 21 REMARK 465 MET C 22 REMARK 465 LYS C 70 REMARK 465 ASN C 71 REMARK 465 PRO C 72 REMARK 465 GLN C 73 REMARK 465 ALA C 74 REMARK 465 HIS C 75 REMARK 465 ILE C 76 REMARK 465 GLU C 77 REMARK 465 GLY C 78 REMARK 465 SER D 21 REMARK 465 MET D 22 REMARK 465 LYS D 70 REMARK 465 ASN D 71 REMARK 465 PRO D 72 REMARK 465 GLN D 73 REMARK 465 ALA D 74 REMARK 465 HIS D 75 REMARK 465 ILE D 76 REMARK 465 GLU D 77 REMARK 465 GLY D 78 REMARK 465 SER E 21 REMARK 465 MET E 22 REMARK 465 LYS E 70 REMARK 465 ASN E 71 REMARK 465 PRO E 72 REMARK 465 GLN E 73 REMARK 465 ALA E 74 REMARK 465 HIS E 75 REMARK 465 ILE E 76 REMARK 465 GLU E 77 REMARK 465 GLY E 78 REMARK 465 ASN E 369 REMARK 465 PRO E 370 REMARK 465 ASN E 371 REMARK 465 ALA E 372 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR B 69 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 161 CE NZ REMARK 470 LYS B 287 CG CD CE NZ REMARK 470 LYS B 301 CG CD CE NZ REMARK 470 GLU B 311 CG CD OE1 OE2 REMARK 470 LYS B 314 CG CD CE NZ REMARK 470 LYS B 346 CG CD CE NZ REMARK 470 TYR C 69 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN C 79 CG OD1 ND2 REMARK 470 LYS C 253 CG CD CE NZ REMARK 470 GLU C 267 CG CD OE1 OE2 REMARK 470 LYS C 301 CG CD CE NZ REMARK 470 LYS C 310 CG CD CE NZ REMARK 470 GLU C 311 CG CD OE1 OE2 REMARK 470 LYS C 314 CG CD CE NZ REMARK 470 ARG C 367 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 371 CG OD1 ND2 REMARK 470 TYR D 69 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS D 95 CG CD CE NZ REMARK 470 GLU D 236 CG CD OE1 OE2 REMARK 470 GLU D 267 CG CD OE1 OE2 REMARK 470 GLU D 299 CG CD OE1 OE2 REMARK 470 LYS D 301 CG CD CE NZ REMARK 470 GLU D 311 CG CD OE1 OE2 REMARK 470 LYS D 314 CG CD CE NZ REMARK 470 ASN D 344 CG OD1 ND2 REMARK 470 LYS D 346 CG CD CE NZ REMARK 470 ARG D 348 CG CD NE CZ NH1 NH2 REMARK 470 ASN D 371 CG OD1 ND2 REMARK 470 TYR E 69 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN E 79 CG OD1 ND2 REMARK 470 LYS E 95 CG CD CE NZ REMARK 470 LYS E 168 CD CE NZ REMARK 470 ASP E 266 CG OD1 OD2 REMARK 470 GLU E 267 CG CD OE1 OE2 REMARK 470 LYS E 287 CG CD CE NZ REMARK 470 LYS E 301 CG CD CE NZ REMARK 470 LYS E 314 CG CD CE NZ REMARK 470 LYS E 340 CG CD CE NZ REMARK 470 GLN E 341 CG CD OE1 NE2 REMARK 470 LYS E 346 CG CD CE NZ REMARK 470 ARG E 348 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 244 NH1 ARG B 282 1.76 REMARK 500 CD GLU B 299 O HOH B 502 1.94 REMARK 500 OE1 GLU D 364 NH2 ARG D 367 1.95 REMARK 500 O HOH C 2129 O HOH C 2308 1.98 REMARK 500 OE2 GLU E 303 O HOH E 4101 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 144 CB - CG - CD1 ANGL. DEV. = 14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR B 174 76.24 -152.67 REMARK 500 ASN B 302 -133.23 55.02 REMARK 500 TYR C 174 76.84 -152.84 REMARK 500 ASN C 302 -134.02 55.86 REMARK 500 TYR D 174 75.97 -153.35 REMARK 500 ASN D 302 -132.58 55.30 REMARK 500 CYS D 336 30.17 -99.97 REMARK 500 TYR E 174 76.69 -153.33 REMARK 500 ASN E 302 -134.06 55.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 214 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F7E B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F7E C 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP C 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F7E D 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP D 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 3003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 3004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 3005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F7E E 4001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP E 4002 DBREF 6GPL B 23 372 UNP O60547 GMDS_HUMAN 23 372 DBREF 6GPL C 23 372 UNP O60547 GMDS_HUMAN 23 372 DBREF 6GPL D 23 372 UNP O60547 GMDS_HUMAN 23 372 DBREF 6GPL E 23 372 UNP O60547 GMDS_HUMAN 23 372 SEQADV 6GPL SER B 21 UNP O60547 EXPRESSION TAG SEQADV 6GPL MET B 22 UNP O60547 EXPRESSION TAG SEQADV 6GPL SER C 21 UNP O60547 EXPRESSION TAG SEQADV 6GPL MET C 22 UNP O60547 EXPRESSION TAG SEQADV 6GPL SER D 21 UNP O60547 EXPRESSION TAG SEQADV 6GPL MET D 22 UNP O60547 EXPRESSION TAG SEQADV 6GPL SER E 21 UNP O60547 EXPRESSION TAG SEQADV 6GPL MET E 22 UNP O60547 EXPRESSION TAG SEQRES 1 B 352 SER MET ARG ASN VAL ALA LEU ILE THR GLY ILE THR GLY SEQRES 2 B 352 GLN ASP GLY SER TYR LEU ALA GLU PHE LEU LEU GLU LYS SEQRES 3 B 352 GLY TYR GLU VAL HIS GLY ILE VAL ARG ARG SER SER SER SEQRES 4 B 352 PHE ASN THR GLY ARG ILE GLU HIS LEU TYR LYS ASN PRO SEQRES 5 B 352 GLN ALA HIS ILE GLU GLY ASN MET LYS LEU HIS TYR GLY SEQRES 6 B 352 ASP LEU THR ASP SER THR CYS LEU VAL LYS ILE ILE ASN SEQRES 7 B 352 GLU VAL LYS PRO THR GLU ILE TYR ASN LEU GLY ALA GLN SEQRES 8 B 352 SER HIS VAL LYS ILE SER PHE ASP LEU ALA GLU TYR THR SEQRES 9 B 352 ALA ASP VAL ASP GLY VAL GLY THR LEU ARG LEU LEU ASP SEQRES 10 B 352 ALA VAL LYS THR CYS GLY LEU ILE ASN SER VAL LYS PHE SEQRES 11 B 352 TYR GLN ALA SER THR SER GLU LEU TYR GLY LYS VAL GLN SEQRES 12 B 352 GLU ILE PRO GLN LYS GLU THR THR PRO PHE TYR PRO ARG SEQRES 13 B 352 SER PRO TYR GLY ALA ALA LYS LEU TYR ALA TYR TRP ILE SEQRES 14 B 352 VAL VAL ASN PHE ARG GLU ALA TYR ASN LEU PHE ALA VAL SEQRES 15 B 352 ASN GLY ILE LEU PHE ASN HIS GLU SER PRO ARG ARG GLY SEQRES 16 B 352 ALA ASN PHE VAL THR ARG LYS ILE SER ARG SER VAL ALA SEQRES 17 B 352 LYS ILE TYR LEU GLY GLN LEU GLU CYS PHE SER LEU GLY SEQRES 18 B 352 ASN LEU ASP ALA LYS ARG ASP TRP GLY HIS ALA LYS ASP SEQRES 19 B 352 TYR VAL GLU ALA MET TRP LEU MET LEU GLN ASN ASP GLU SEQRES 20 B 352 PRO GLU ASP PHE VAL ILE ALA THR GLY GLU VAL HIS SER SEQRES 21 B 352 VAL ARG GLU PHE VAL GLU LYS SER PHE LEU HIS ILE GLY SEQRES 22 B 352 LYS THR ILE VAL TRP GLU GLY LYS ASN GLU ASN GLU VAL SEQRES 23 B 352 GLY ARG CYS LYS GLU THR GLY LYS VAL HIS VAL THR VAL SEQRES 24 B 352 ASP LEU LYS TYR TYR ARG PRO THR GLU VAL ASP PHE LEU SEQRES 25 B 352 GLN GLY ASP CYS THR LYS ALA LYS GLN LYS LEU ASN TRP SEQRES 26 B 352 LYS PRO ARG VAL ALA PHE ASP GLU LEU VAL ARG GLU MET SEQRES 27 B 352 VAL HIS ALA ASP VAL GLU LEU MET ARG THR ASN PRO ASN SEQRES 28 B 352 ALA SEQRES 1 C 352 SER MET ARG ASN VAL ALA LEU ILE THR GLY ILE THR GLY SEQRES 2 C 352 GLN ASP GLY SER TYR LEU ALA GLU PHE LEU LEU GLU LYS SEQRES 3 C 352 GLY TYR GLU VAL HIS GLY ILE VAL ARG ARG SER SER SER SEQRES 4 C 352 PHE ASN THR GLY ARG ILE GLU HIS LEU TYR LYS ASN PRO SEQRES 5 C 352 GLN ALA HIS ILE GLU GLY ASN MET LYS LEU HIS TYR GLY SEQRES 6 C 352 ASP LEU THR ASP SER THR CYS LEU VAL LYS ILE ILE ASN SEQRES 7 C 352 GLU VAL LYS PRO THR GLU ILE TYR ASN LEU GLY ALA GLN SEQRES 8 C 352 SER HIS VAL LYS ILE SER PHE ASP LEU ALA GLU TYR THR SEQRES 9 C 352 ALA ASP VAL ASP GLY VAL GLY THR LEU ARG LEU LEU ASP SEQRES 10 C 352 ALA VAL LYS THR CYS GLY LEU ILE ASN SER VAL LYS PHE SEQRES 11 C 352 TYR GLN ALA SER THR SER GLU LEU TYR GLY LYS VAL GLN SEQRES 12 C 352 GLU ILE PRO GLN LYS GLU THR THR PRO PHE TYR PRO ARG SEQRES 13 C 352 SER PRO TYR GLY ALA ALA LYS LEU TYR ALA TYR TRP ILE SEQRES 14 C 352 VAL VAL ASN PHE ARG GLU ALA TYR ASN LEU PHE ALA VAL SEQRES 15 C 352 ASN GLY ILE LEU PHE ASN HIS GLU SER PRO ARG ARG GLY SEQRES 16 C 352 ALA ASN PHE VAL THR ARG LYS ILE SER ARG SER VAL ALA SEQRES 17 C 352 LYS ILE TYR LEU GLY GLN LEU GLU CYS PHE SER LEU GLY SEQRES 18 C 352 ASN LEU ASP ALA LYS ARG ASP TRP GLY HIS ALA LYS ASP SEQRES 19 C 352 TYR VAL GLU ALA MET TRP LEU MET LEU GLN ASN ASP GLU SEQRES 20 C 352 PRO GLU ASP PHE VAL ILE ALA THR GLY GLU VAL HIS SER SEQRES 21 C 352 VAL ARG GLU PHE VAL GLU LYS SER PHE LEU HIS ILE GLY SEQRES 22 C 352 LYS THR ILE VAL TRP GLU GLY LYS ASN GLU ASN GLU VAL SEQRES 23 C 352 GLY ARG CYS LYS GLU THR GLY LYS VAL HIS VAL THR VAL SEQRES 24 C 352 ASP LEU LYS TYR TYR ARG PRO THR GLU VAL ASP PHE LEU SEQRES 25 C 352 GLN GLY ASP CYS THR LYS ALA LYS GLN LYS LEU ASN TRP SEQRES 26 C 352 LYS PRO ARG VAL ALA PHE ASP GLU LEU VAL ARG GLU MET SEQRES 27 C 352 VAL HIS ALA ASP VAL GLU LEU MET ARG THR ASN PRO ASN SEQRES 28 C 352 ALA SEQRES 1 D 352 SER MET ARG ASN VAL ALA LEU ILE THR GLY ILE THR GLY SEQRES 2 D 352 GLN ASP GLY SER TYR LEU ALA GLU PHE LEU LEU GLU LYS SEQRES 3 D 352 GLY TYR GLU VAL HIS GLY ILE VAL ARG ARG SER SER SER SEQRES 4 D 352 PHE ASN THR GLY ARG ILE GLU HIS LEU TYR LYS ASN PRO SEQRES 5 D 352 GLN ALA HIS ILE GLU GLY ASN MET LYS LEU HIS TYR GLY SEQRES 6 D 352 ASP LEU THR ASP SER THR CYS LEU VAL LYS ILE ILE ASN SEQRES 7 D 352 GLU VAL LYS PRO THR GLU ILE TYR ASN LEU GLY ALA GLN SEQRES 8 D 352 SER HIS VAL LYS ILE SER PHE ASP LEU ALA GLU TYR THR SEQRES 9 D 352 ALA ASP VAL ASP GLY VAL GLY THR LEU ARG LEU LEU ASP SEQRES 10 D 352 ALA VAL LYS THR CYS GLY LEU ILE ASN SER VAL LYS PHE SEQRES 11 D 352 TYR GLN ALA SER THR SER GLU LEU TYR GLY LYS VAL GLN SEQRES 12 D 352 GLU ILE PRO GLN LYS GLU THR THR PRO PHE TYR PRO ARG SEQRES 13 D 352 SER PRO TYR GLY ALA ALA LYS LEU TYR ALA TYR TRP ILE SEQRES 14 D 352 VAL VAL ASN PHE ARG GLU ALA TYR ASN LEU PHE ALA VAL SEQRES 15 D 352 ASN GLY ILE LEU PHE ASN HIS GLU SER PRO ARG ARG GLY SEQRES 16 D 352 ALA ASN PHE VAL THR ARG LYS ILE SER ARG SER VAL ALA SEQRES 17 D 352 LYS ILE TYR LEU GLY GLN LEU GLU CYS PHE SER LEU GLY SEQRES 18 D 352 ASN LEU ASP ALA LYS ARG ASP TRP GLY HIS ALA LYS ASP SEQRES 19 D 352 TYR VAL GLU ALA MET TRP LEU MET LEU GLN ASN ASP GLU SEQRES 20 D 352 PRO GLU ASP PHE VAL ILE ALA THR GLY GLU VAL HIS SER SEQRES 21 D 352 VAL ARG GLU PHE VAL GLU LYS SER PHE LEU HIS ILE GLY SEQRES 22 D 352 LYS THR ILE VAL TRP GLU GLY LYS ASN GLU ASN GLU VAL SEQRES 23 D 352 GLY ARG CYS LYS GLU THR GLY LYS VAL HIS VAL THR VAL SEQRES 24 D 352 ASP LEU LYS TYR TYR ARG PRO THR GLU VAL ASP PHE LEU SEQRES 25 D 352 GLN GLY ASP CYS THR LYS ALA LYS GLN LYS LEU ASN TRP SEQRES 26 D 352 LYS PRO ARG VAL ALA PHE ASP GLU LEU VAL ARG GLU MET SEQRES 27 D 352 VAL HIS ALA ASP VAL GLU LEU MET ARG THR ASN PRO ASN SEQRES 28 D 352 ALA SEQRES 1 E 352 SER MET ARG ASN VAL ALA LEU ILE THR GLY ILE THR GLY SEQRES 2 E 352 GLN ASP GLY SER TYR LEU ALA GLU PHE LEU LEU GLU LYS SEQRES 3 E 352 GLY TYR GLU VAL HIS GLY ILE VAL ARG ARG SER SER SER SEQRES 4 E 352 PHE ASN THR GLY ARG ILE GLU HIS LEU TYR LYS ASN PRO SEQRES 5 E 352 GLN ALA HIS ILE GLU GLY ASN MET LYS LEU HIS TYR GLY SEQRES 6 E 352 ASP LEU THR ASP SER THR CYS LEU VAL LYS ILE ILE ASN SEQRES 7 E 352 GLU VAL LYS PRO THR GLU ILE TYR ASN LEU GLY ALA GLN SEQRES 8 E 352 SER HIS VAL LYS ILE SER PHE ASP LEU ALA GLU TYR THR SEQRES 9 E 352 ALA ASP VAL ASP GLY VAL GLY THR LEU ARG LEU LEU ASP SEQRES 10 E 352 ALA VAL LYS THR CYS GLY LEU ILE ASN SER VAL LYS PHE SEQRES 11 E 352 TYR GLN ALA SER THR SER GLU LEU TYR GLY LYS VAL GLN SEQRES 12 E 352 GLU ILE PRO GLN LYS GLU THR THR PRO PHE TYR PRO ARG SEQRES 13 E 352 SER PRO TYR GLY ALA ALA LYS LEU TYR ALA TYR TRP ILE SEQRES 14 E 352 VAL VAL ASN PHE ARG GLU ALA TYR ASN LEU PHE ALA VAL SEQRES 15 E 352 ASN GLY ILE LEU PHE ASN HIS GLU SER PRO ARG ARG GLY SEQRES 16 E 352 ALA ASN PHE VAL THR ARG LYS ILE SER ARG SER VAL ALA SEQRES 17 E 352 LYS ILE TYR LEU GLY GLN LEU GLU CYS PHE SER LEU GLY SEQRES 18 E 352 ASN LEU ASP ALA LYS ARG ASP TRP GLY HIS ALA LYS ASP SEQRES 19 E 352 TYR VAL GLU ALA MET TRP LEU MET LEU GLN ASN ASP GLU SEQRES 20 E 352 PRO GLU ASP PHE VAL ILE ALA THR GLY GLU VAL HIS SER SEQRES 21 E 352 VAL ARG GLU PHE VAL GLU LYS SER PHE LEU HIS ILE GLY SEQRES 22 E 352 LYS THR ILE VAL TRP GLU GLY LYS ASN GLU ASN GLU VAL SEQRES 23 E 352 GLY ARG CYS LYS GLU THR GLY LYS VAL HIS VAL THR VAL SEQRES 24 E 352 ASP LEU LYS TYR TYR ARG PRO THR GLU VAL ASP PHE LEU SEQRES 25 E 352 GLN GLY ASP CYS THR LYS ALA LYS GLN LYS LEU ASN TRP SEQRES 26 E 352 LYS PRO ARG VAL ALA PHE ASP GLU LEU VAL ARG GLU MET SEQRES 27 E 352 VAL HIS ALA ASP VAL GLU LEU MET ARG THR ASN PRO ASN SEQRES 28 E 352 ALA HET BCN B 401 11 HET F7E B 402 38 HET NAP B 403 48 HET EDO B 404 4 HET EDO B 405 4 HET EDO B 406 4 HET EDO B 407 4 HET F7E C2001 38 HET NAP C2002 48 HET EDO C2003 4 HET EDO C2004 4 HET F7E D3001 38 HET NAP D3002 48 HET EDO D3003 4 HET EDO D3004 4 HET EDO D3005 4 HET F7E E4001 38 HET NAP E4002 48 HETNAM BCN BICINE HETNAM F7E [[(2~{R},3~{S},4~{R},5~{R})-5-(2-AZANYL-6- HETNAM 2 F7E OXIDANYLIDENE-1~{H}-PURIN-9-YL)-3,4-BIS(OXIDANYL) HETNAM 3 F7E OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL] [(2~{R}, HETNAM 4 F7E 3~{S},4~{R},6~{R})-6-METHYL-3,4-BIS(OXIDANYL)-5- HETNAM 5 F7E OXIDANYLIDENE-OXAN-2-YL] HYDROGEN PHOSPHATE HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 5 BCN C6 H13 N O4 FORMUL 6 F7E 4(C16 H23 N5 O15 P2) FORMUL 7 NAP 4(C21 H28 N7 O17 P3) FORMUL 8 EDO 9(C2 H6 O2) FORMUL 23 HOH *886(H2 O) HELIX 1 AA1 GLY B 33 LYS B 46 1 14 HELIX 2 AA2 ILE B 65 TYR B 69 5 5 HELIX 3 AA3 ASP B 89 LYS B 101 1 13 HELIX 4 AA4 HIS B 113 LEU B 120 1 8 HELIX 5 AA5 LEU B 120 GLY B 129 1 10 HELIX 6 AA6 GLY B 129 CYS B 142 1 14 HELIX 7 AA7 GLU B 157 GLY B 160 5 4 HELIX 8 AA8 SER B 177 ASN B 198 1 22 HELIX 9 AA9 PHE B 218 LEU B 232 1 15 HELIX 10 AB1 ALA B 252 ASN B 265 1 14 HELIX 11 AB2 VAL B 281 HIS B 291 1 11 HELIX 12 AB3 LYS B 301 ASN B 304 5 4 HELIX 13 AB4 LEU B 321 TYR B 324 5 4 HELIX 14 AB5 CYS B 336 ASN B 344 1 9 HELIX 15 AB6 ALA B 350 ASN B 369 1 20 HELIX 16 AB7 GLY C 33 LYS C 46 1 14 HELIX 17 AB8 ILE C 65 TYR C 69 5 5 HELIX 18 AB9 ASP C 89 LYS C 101 1 13 HELIX 19 AC1 HIS C 113 LEU C 120 1 8 HELIX 20 AC2 LEU C 120 GLY C 129 1 10 HELIX 21 AC3 GLY C 129 CYS C 142 1 14 HELIX 22 AC4 GLU C 157 GLY C 160 5 4 HELIX 23 AC5 SER C 177 ASN C 198 1 22 HELIX 24 AC6 PHE C 218 LEU C 232 1 15 HELIX 25 AC7 ALA C 252 ASN C 265 1 14 HELIX 26 AC8 VAL C 281 HIS C 291 1 11 HELIX 27 AC9 LYS C 301 ASN C 304 5 4 HELIX 28 AD1 LEU C 321 TYR C 324 5 4 HELIX 29 AD2 CYS C 336 ASN C 344 1 9 HELIX 30 AD3 ALA C 350 ASN C 369 1 20 HELIX 31 AD4 GLY D 33 LYS D 46 1 14 HELIX 32 AD5 ILE D 65 TYR D 69 5 5 HELIX 33 AD6 ASP D 89 LYS D 101 1 13 HELIX 34 AD7 HIS D 113 LEU D 120 1 8 HELIX 35 AD8 LEU D 120 GLY D 129 1 10 HELIX 36 AD9 GLY D 129 CYS D 142 1 14 HELIX 37 AE1 GLU D 157 GLY D 160 5 4 HELIX 38 AE2 SER D 177 ASN D 198 1 22 HELIX 39 AE3 PHE D 218 LEU D 232 1 15 HELIX 40 AE4 ALA D 252 ASN D 265 1 14 HELIX 41 AE5 VAL D 281 HIS D 291 1 11 HELIX 42 AE6 LYS D 301 ASN D 304 5 4 HELIX 43 AE7 LEU D 321 TYR D 324 5 4 HELIX 44 AE8 CYS D 336 ASN D 344 1 9 HELIX 45 AE9 ALA D 350 ASN D 369 1 20 HELIX 46 AF1 GLY E 33 LYS E 46 1 14 HELIX 47 AF2 ILE E 65 TYR E 69 5 5 HELIX 48 AF3 ASP E 89 LYS E 101 1 13 HELIX 49 AF4 HIS E 113 LEU E 120 1 8 HELIX 50 AF5 LEU E 120 GLY E 129 1 10 HELIX 51 AF6 GLY E 129 CYS E 142 1 14 HELIX 52 AF7 GLU E 157 GLY E 160 5 4 HELIX 53 AF8 SER E 177 ASN E 198 1 22 HELIX 54 AF9 PHE E 218 LEU E 232 1 15 HELIX 55 AG1 ALA E 252 ASN E 265 1 14 HELIX 56 AG2 VAL E 281 HIS E 291 1 11 HELIX 57 AG3 LYS E 301 ASN E 304 5 4 HELIX 58 AG4 LEU E 321 TYR E 324 5 4 HELIX 59 AG5 CYS E 336 ASN E 344 1 9 HELIX 60 AG6 ALA E 350 THR E 368 1 19 SHEET 1 AA1 7 MET B 80 TYR B 84 0 SHEET 2 AA1 7 GLU B 49 VAL B 54 1 N VAL B 54 O HIS B 83 SHEET 3 AA1 7 VAL B 25 THR B 29 1 N ILE B 28 O HIS B 51 SHEET 4 AA1 7 GLU B 104 ASN B 107 1 O TYR B 106 N LEU B 27 SHEET 5 AA1 7 LYS B 149 THR B 155 1 O TYR B 151 N ILE B 105 SHEET 6 AA1 7 PHE B 200 LEU B 206 1 O PHE B 200 N PHE B 150 SHEET 7 AA1 7 PHE B 271 ILE B 273 1 O PHE B 271 N ILE B 205 SHEET 1 AA2 2 HIS B 209 GLU B 210 0 SHEET 2 AA2 2 GLY B 250 HIS B 251 1 O GLY B 250 N GLU B 210 SHEET 1 AA3 4 PHE B 238 LEU B 240 0 SHEET 2 AA3 4 VAL B 315 VAL B 319 1 O THR B 318 N LEU B 240 SHEET 3 AA3 4 VAL B 306 CYS B 309 -1 N GLY B 307 O VAL B 317 SHEET 4 AA3 4 ILE B 296 GLU B 299 -1 N VAL B 297 O ARG B 308 SHEET 1 AA4 2 LYS B 246 ARG B 247 0 SHEET 2 AA4 2 HIS B 279 SER B 280 -1 O HIS B 279 N ARG B 247 SHEET 1 AA5 7 MET C 80 TYR C 84 0 SHEET 2 AA5 7 GLU C 49 VAL C 54 1 N VAL C 54 O HIS C 83 SHEET 3 AA5 7 VAL C 25 THR C 29 1 N ILE C 28 O HIS C 51 SHEET 4 AA5 7 GLU C 104 ASN C 107 1 O TYR C 106 N LEU C 27 SHEET 5 AA5 7 LYS C 149 THR C 155 1 O TYR C 151 N ILE C 105 SHEET 6 AA5 7 PHE C 200 LEU C 206 1 O PHE C 200 N PHE C 150 SHEET 7 AA5 7 PHE C 271 ILE C 273 1 O PHE C 271 N ILE C 205 SHEET 1 AA6 2 HIS C 209 GLU C 210 0 SHEET 2 AA6 2 GLY C 250 HIS C 251 1 O GLY C 250 N GLU C 210 SHEET 1 AA7 4 PHE C 238 LEU C 240 0 SHEET 2 AA7 4 VAL C 315 VAL C 319 1 O THR C 318 N LEU C 240 SHEET 3 AA7 4 VAL C 306 CYS C 309 -1 N GLY C 307 O VAL C 317 SHEET 4 AA7 4 ILE C 296 GLU C 299 -1 N VAL C 297 O ARG C 308 SHEET 1 AA8 2 LYS C 246 ARG C 247 0 SHEET 2 AA8 2 HIS C 279 SER C 280 -1 O HIS C 279 N ARG C 247 SHEET 1 AA9 7 MET D 80 TYR D 84 0 SHEET 2 AA9 7 GLU D 49 VAL D 54 1 N VAL D 54 O HIS D 83 SHEET 3 AA9 7 VAL D 25 THR D 29 1 N ILE D 28 O HIS D 51 SHEET 4 AA9 7 GLU D 104 ASN D 107 1 O TYR D 106 N LEU D 27 SHEET 5 AA9 7 LYS D 149 THR D 155 1 O TYR D 151 N ILE D 105 SHEET 6 AA9 7 PHE D 200 LEU D 206 1 O PHE D 200 N PHE D 150 SHEET 7 AA9 7 PHE D 271 ILE D 273 1 O PHE D 271 N ILE D 205 SHEET 1 AB1 2 HIS D 209 GLU D 210 0 SHEET 2 AB1 2 GLY D 250 HIS D 251 1 O GLY D 250 N GLU D 210 SHEET 1 AB2 4 PHE D 238 LEU D 240 0 SHEET 2 AB2 4 VAL D 315 VAL D 319 1 O THR D 318 N LEU D 240 SHEET 3 AB2 4 VAL D 306 CYS D 309 -1 N GLY D 307 O VAL D 317 SHEET 4 AB2 4 ILE D 296 GLU D 299 -1 N VAL D 297 O ARG D 308 SHEET 1 AB3 2 LYS D 246 ARG D 247 0 SHEET 2 AB3 2 HIS D 279 SER D 280 -1 O HIS D 279 N ARG D 247 SHEET 1 AB4 7 MET E 80 TYR E 84 0 SHEET 2 AB4 7 GLU E 49 VAL E 54 1 N VAL E 54 O HIS E 83 SHEET 3 AB4 7 VAL E 25 THR E 29 1 N ILE E 28 O HIS E 51 SHEET 4 AB4 7 GLU E 104 ASN E 107 1 O TYR E 106 N LEU E 27 SHEET 5 AB4 7 LYS E 149 THR E 155 1 O TYR E 151 N ILE E 105 SHEET 6 AB4 7 PHE E 200 LEU E 206 1 O PHE E 200 N PHE E 150 SHEET 7 AB4 7 PHE E 271 ILE E 273 1 O PHE E 271 N ILE E 205 SHEET 1 AB5 2 HIS E 209 GLU E 210 0 SHEET 2 AB5 2 GLY E 250 HIS E 251 1 O GLY E 250 N GLU E 210 SHEET 1 AB6 4 PHE E 238 LEU E 240 0 SHEET 2 AB6 4 VAL E 315 VAL E 319 1 O THR E 318 N LEU E 240 SHEET 3 AB6 4 VAL E 306 CYS E 309 -1 N GLY E 307 O VAL E 317 SHEET 4 AB6 4 ILE E 296 GLU E 299 -1 N VAL E 297 O ARG E 308 SHEET 1 AB7 2 LYS E 246 ARG E 247 0 SHEET 2 AB7 2 HIS E 279 SER E 280 -1 O HIS E 279 N ARG E 247 CISPEP 1 ILE B 165 PRO B 166 0 -5.02 CISPEP 2 ILE C 165 PRO C 166 0 -5.23 CISPEP 3 ILE D 165 PRO D 166 0 -6.35 CISPEP 4 ILE E 165 PRO E 166 0 -5.31 SITE 1 AC1 11 ARG B 64 ARG B 213 ARG B 214 GLY B 215 SITE 2 AC1 11 ALA B 216 ARG B 221 LEU B 365 HOH B 560 SITE 3 AC1 11 HOH B 695 SER E 59 PHE E 60 SITE 1 AC2 27 SER B 112 HIS B 113 VAL B 114 THR B 155 SITE 2 AC2 27 SER B 156 TYR B 179 ASN B 208 ARG B 214 SITE 3 AC2 27 ASN B 217 PHE B 218 VAL B 219 LYS B 222 SITE 4 AC2 27 LEU B 240 GLY B 241 ASN B 242 ALA B 245 SITE 5 AC2 27 ARG B 247 VAL B 281 ARG B 325 GLU B 328 SITE 6 AC2 27 NAP B 403 HOH B 565 HOH B 575 HOH B 616 SITE 7 AC2 27 HOH B 631 HOH B 653 HOH B 663 SITE 1 AC3 40 GLY B 30 THR B 32 GLY B 33 GLN B 34 SITE 2 AC3 40 ASP B 35 ARG B 55 ASN B 61 ASP B 86 SITE 3 AC3 40 LEU B 87 LEU B 108 GLY B 109 ALA B 110 SITE 4 AC3 40 SER B 112 TYR B 123 VAL B 127 ALA B 153 SITE 5 AC3 40 SER B 154 THR B 155 TYR B 179 LYS B 183 SITE 6 AC3 40 LEU B 206 ASN B 208 HIS B 209 ARG B 214 SITE 7 AC3 40 F7E B 402 EDO B 406 HOH B 543 HOH B 570 SITE 8 AC3 40 HOH B 575 HOH B 585 HOH B 586 HOH B 588 SITE 9 AC3 40 HOH B 590 HOH B 633 HOH B 676 HOH B 689 SITE 10 AC3 40 ARG E 56 SER E 57 SER E 58 HOH E4225 SITE 1 AC4 4 ARG B 176 PRO B 326 HOH B 618 GLU C 195 SITE 1 AC5 4 ARG B 194 GLU B 195 EDO B 407 HOH B 508 SITE 1 AC6 7 ARG B 55 ASN B 61 NAP B 403 ARG E 55 SITE 2 AC6 7 SER E 57 ASN E 61 NAP E4002 SITE 1 AC7 7 TYR B 187 TRP B 188 ARG B 194 EDO B 405 SITE 2 AC7 7 HOH B 548 HOH B 650 TYR C 174 SITE 1 AC8 27 SER C 112 HIS C 113 VAL C 114 THR C 155 SITE 2 AC8 27 SER C 156 TYR C 179 ASN C 208 ARG C 214 SITE 3 AC8 27 ASN C 217 PHE C 218 VAL C 219 LYS C 222 SITE 4 AC8 27 LEU C 240 GLY C 241 ASN C 242 ALA C 245 SITE 5 AC8 27 ARG C 247 VAL C 281 ARG C 325 GLU C 328 SITE 6 AC8 27 NAP C2002 HOH C2186 HOH C2196 HOH C2199 SITE 7 AC8 27 HOH C2212 HOH C2213 HOH C2230 SITE 1 AC9 40 GLY C 30 THR C 32 GLY C 33 GLN C 34 SITE 2 AC9 40 ASP C 35 ARG C 55 ASP C 86 LEU C 87 SITE 3 AC9 40 LEU C 108 GLY C 109 ALA C 110 SER C 112 SITE 4 AC9 40 TYR C 123 VAL C 127 ALA C 153 SER C 154 SITE 5 AC9 40 THR C 155 TYR C 179 LYS C 183 LEU C 206 SITE 6 AC9 40 ASN C 208 HIS C 209 ARG C 214 F7E C2001 SITE 7 AC9 40 HOH C2135 HOH C2164 HOH C2171 HOH C2175 SITE 8 AC9 40 HOH C2212 HOH C2217 HOH C2226 HOH C2233 SITE 9 AC9 40 HOH C2236 HOH C2249 HOH C2257 HOH C2268 SITE 10 AC9 40 ARG D 56 SER D 57 SER D 58 EDO D3003 SITE 1 AD1 7 TYR B 174 TYR C 187 TRP C 188 ARG C 194 SITE 2 AD1 7 ASP C 270 HOH C2110 HOH C2146 SITE 1 AD2 3 ARG C 194 GLU C 195 HOH C2107 SITE 1 AD3 29 SER D 112 HIS D 113 VAL D 114 THR D 155 SITE 2 AD3 29 SER D 156 TYR D 179 ASN D 208 ARG D 214 SITE 3 AD3 29 ASN D 217 PHE D 218 VAL D 219 LYS D 222 SITE 4 AD3 29 LEU D 240 GLY D 241 ASN D 242 ALA D 245 SITE 5 AD3 29 ARG D 247 VAL D 281 TYR D 323 ARG D 325 SITE 6 AD3 29 GLU D 328 NAP D3002 HOH D3110 HOH D3132 SITE 7 AD3 29 HOH D3161 HOH D3194 HOH D3218 HOH D3226 SITE 8 AD3 29 HOH D3227 SITE 1 AD4 40 ARG C 56 SER C 57 SER C 58 GLY D 30 SITE 2 AD4 40 THR D 32 GLY D 33 GLN D 34 ASP D 35 SITE 3 AD4 40 ARG D 55 ASP D 86 LEU D 87 LEU D 108 SITE 4 AD4 40 GLY D 109 ALA D 110 SER D 112 TYR D 123 SITE 5 AD4 40 VAL D 127 ALA D 153 SER D 154 THR D 155 SITE 6 AD4 40 TYR D 179 LYS D 183 LEU D 206 ASN D 208 SITE 7 AD4 40 HIS D 209 ARG D 214 F7E D3001 EDO D3003 SITE 8 AD4 40 HOH D3114 HOH D3120 HOH D3132 HOH D3164 SITE 9 AD4 40 HOH D3186 HOH D3189 HOH D3191 HOH D3198 SITE 10 AD4 40 HOH D3200 HOH D3204 HOH D3219 HOH D3232 SITE 1 AD5 8 ARG C 55 SER C 57 ASN C 61 NAP C2002 SITE 2 AD5 8 ARG D 55 SER D 57 ASN D 61 NAP D3002 SITE 1 AD6 6 TYR D 187 TRP D 188 ARG D 194 ASP D 270 SITE 2 AD6 6 HOH D3169 HOH D3197 SITE 1 AD7 4 TYR D 174 HOH D3103 TYR E 187 TRP E 188 SITE 1 AD8 29 SER E 112 VAL E 114 THR E 155 SER E 156 SITE 2 AD8 29 GLU E 157 TYR E 179 ASN E 208 ARG E 214 SITE 3 AD8 29 ASN E 217 PHE E 218 VAL E 219 LYS E 222 SITE 4 AD8 29 LEU E 240 GLY E 241 ASN E 242 ALA E 245 SITE 5 AD8 29 ARG E 247 VAL E 281 TYR E 323 ARG E 325 SITE 6 AD8 29 GLU E 328 NAP E4002 HOH E4125 HOH E4143 SITE 7 AD8 29 HOH E4175 HOH E4210 HOH E4215 HOH E4217 SITE 8 AD8 29 HOH E4243 SITE 1 AD9 39 ARG B 56 SER B 57 SER B 58 EDO B 406 SITE 2 AD9 39 GLY E 30 THR E 32 GLY E 33 GLN E 34 SITE 3 AD9 39 ASP E 35 ARG E 55 ASP E 86 LEU E 87 SITE 4 AD9 39 LEU E 108 GLY E 109 ALA E 110 SER E 112 SITE 5 AD9 39 TYR E 123 VAL E 127 ALA E 153 SER E 154 SITE 6 AD9 39 THR E 155 TYR E 179 LYS E 183 LEU E 206 SITE 7 AD9 39 ASN E 208 HIS E 209 ARG E 214 F7E E4001 SITE 8 AD9 39 HOH E4143 HOH E4145 HOH E4152 HOH E4168 SITE 9 AD9 39 HOH E4179 HOH E4185 HOH E4187 HOH E4197 SITE 10 AD9 39 HOH E4239 HOH E4251 HOH E4262 CRYST1 89.260 122.770 139.500 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011203 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008145 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007168 0.00000