PDB Short entry for 6H60 HEADER OXIDOREDUCTASE 25-JUL-18 6H60 TITLE PSEUDO-ATOMIC STRUCTURAL MODEL OF THE E3BP COMPONENT OF THE HUMAN TITLE 2 PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRUVATE DEHYDROGENASE PROTEIN X COMPONENT, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DIHYDROLIPOAMIDE DEHYDROGENASE-BINDING PROTEIN OF PYRUVATE COMPND 5 DEHYDROGENASE COMPLEX,E3-BINDING PROTEIN,E3BP,LIPOYL-CONTAINING COMPND 6 PYRUVATE DEHYDROGENASE COMPLEX COMPONENT X,PROX; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PDHX, PDX1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PYRUVATE DEHYDROGENASE, HUMAN, OXIDOREDUCTASE EXPDTA ELECTRON MICROSCOPY AUTHOR D.HASELBACH,S.PRAJAPATI,K.TITTMANN,H.STARK REVDAT 3 11-DEC-19 6H60 1 SCALE REVDAT 2 10-JUL-19 6H60 1 JRNL REVDAT 1 05-JUN-19 6H60 0 JRNL AUTH S.PRAJAPATI,D.HASELBACH,S.WITTIG,M.S.PATEL,A.CHARI, JRNL AUTH 2 C.SCHMIDT,H.STARK,K.TITTMANN JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSES OF THE HUMAN PDH COMPLEX JRNL TITL 2 SUGGEST A "DIVISION-OF-LABOR" MECHANISM BY LOCAL E1 AND E3 JRNL TITL 3 CLUSTERS. JRNL REF STRUCTURE V. 27 1124 2019 JRNL REFN ISSN 0969-2126 JRNL PMID 31130485 JRNL DOI 10.1016/J.STR.2019.04.009 REMARK 2 REMARK 2 RESOLUTION. 6.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 6.000 REMARK 3 NUMBER OF PARTICLES : 29788 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6H60 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200011124. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : 1 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON II (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 41.00 REMARK 245 ILLUMINATION MODE : SPOT SCAN REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -267 REMARK 465 ALA A -266 REMARK 465 ALA A -265 REMARK 465 SER A -264 REMARK 465 TRP A -263 REMARK 465 ARG A -262 REMARK 465 LEU A -261 REMARK 465 GLY A -260 REMARK 465 CYS A -259 REMARK 465 ASP A -258 REMARK 465 PRO A -257 REMARK 465 ARG A -256 REMARK 465 LEU A -255 REMARK 465 LEU A -254 REMARK 465 ARG A -253 REMARK 465 TYR A -252 REMARK 465 LEU A -251 REMARK 465 VAL A -250 REMARK 465 GLY A -249 REMARK 465 PHE A -248 REMARK 465 PRO A -247 REMARK 465 GLY A -246 REMARK 465 ARG A -245 REMARK 465 ARG A -244 REMARK 465 SER A -243 REMARK 465 VAL A -242 REMARK 465 GLY A -241 REMARK 465 LEU A -240 REMARK 465 VAL A -239 REMARK 465 LYS A -238 REMARK 465 GLY A -237 REMARK 465 ALA A -236 REMARK 465 LEU A -235 REMARK 465 GLY A -234 REMARK 465 TRP A -233 REMARK 465 SER A -232 REMARK 465 VAL A -231 REMARK 465 SER A -230 REMARK 465 ARG A -229 REMARK 465 GLY A -228 REMARK 465 ALA A -227 REMARK 465 ASN A -226 REMARK 465 TRP A -225 REMARK 465 ARG A -224 REMARK 465 TRP A -223 REMARK 465 PHE A -222 REMARK 465 HIS A -221 REMARK 465 SER A -220 REMARK 465 THR A -219 REMARK 465 GLN A -218 REMARK 465 TRP A -217 REMARK 465 LEU A -216 REMARK 465 ARG A -215 REMARK 465 GLY A -214 REMARK 465 ASP A -213 REMARK 465 PRO A -212 REMARK 465 ILE A -211 REMARK 465 LYS A -210 REMARK 465 ILE A -209 REMARK 465 LEU A -208 REMARK 465 MET A -207 REMARK 465 PRO A -206 REMARK 465 SER A -205 REMARK 465 LEU A -204 REMARK 465 SER A -203 REMARK 465 PRO A -202 REMARK 465 THR A -201 REMARK 465 MET A -200 REMARK 465 GLU A -199 REMARK 465 GLU A -198 REMARK 465 GLY A -197 REMARK 465 ASN A -196 REMARK 465 ILE A -195 REMARK 465 VAL A -194 REMARK 465 LYS A -193 REMARK 465 TRP A -192 REMARK 465 LEU A -191 REMARK 465 LYS A -190 REMARK 465 LYS A -189 REMARK 465 GLU A -188 REMARK 465 GLY A -187 REMARK 465 GLU A -186 REMARK 465 ALA A -185 REMARK 465 VAL A -184 REMARK 465 SER A -183 REMARK 465 ALA A -182 REMARK 465 GLY A -181 REMARK 465 ASP A -180 REMARK 465 ALA A -179 REMARK 465 LEU A -178 REMARK 465 CYS A -177 REMARK 465 GLU A -176 REMARK 465 ILE A -175 REMARK 465 GLU A -174 REMARK 465 THR A -173 REMARK 465 ASP A -172 REMARK 465 LYS A -171 REMARK 465 ALA A -170 REMARK 465 VAL A -169 REMARK 465 VAL A -168 REMARK 465 THR A -167 REMARK 465 LEU A -166 REMARK 465 ASP A -165 REMARK 465 ALA A -164 REMARK 465 SER A -163 REMARK 465 ASP A -162 REMARK 465 ASP A -161 REMARK 465 GLY A -160 REMARK 465 ILE A -159 REMARK 465 LEU A -158 REMARK 465 ALA A -157 REMARK 465 LYS A -156 REMARK 465 ILE A -155 REMARK 465 VAL A -154 REMARK 465 VAL A -153 REMARK 465 GLU A -152 REMARK 465 GLU A -151 REMARK 465 GLY A -150 REMARK 465 SER A -149 REMARK 465 LYS A -148 REMARK 465 ASN A -147 REMARK 465 ILE A -146 REMARK 465 ARG A -145 REMARK 465 LEU A -144 REMARK 465 GLY A -143 REMARK 465 SER A -142 REMARK 465 LEU A -141 REMARK 465 ILE A -140 REMARK 465 GLY A -139 REMARK 465 LEU A -138 REMARK 465 ILE A -137 REMARK 465 VAL A -136 REMARK 465 GLU A -135 REMARK 465 GLU A -134 REMARK 465 GLY A -133 REMARK 465 GLU A -132 REMARK 465 ASP A -131 REMARK 465 TRP A -130 REMARK 465 LYS A -129 REMARK 465 HIS A -128 REMARK 465 VAL A -127 REMARK 465 GLU A -126 REMARK 465 ILE A -125 REMARK 465 PRO A -124 REMARK 465 LYS A -123 REMARK 465 ASP A -122 REMARK 465 VAL A -121 REMARK 465 GLY A -120 REMARK 465 PRO A -119 REMARK 465 PRO A -118 REMARK 465 PRO A -117 REMARK 465 PRO A -116 REMARK 465 VAL A -115 REMARK 465 SER A -114 REMARK 465 LYS A -113 REMARK 465 PRO A -112 REMARK 465 SER A -111 REMARK 465 GLU A -110 REMARK 465 PRO A -109 REMARK 465 ARG A -108 REMARK 465 PRO A -107 REMARK 465 SER A -106 REMARK 465 PRO A -105 REMARK 465 GLU A -104 REMARK 465 PRO A -103 REMARK 465 GLN A -102 REMARK 465 ILE A -101 REMARK 465 SER A -100 REMARK 465 ILE A -99 REMARK 465 PRO A -98 REMARK 465 VAL A -97 REMARK 465 LYS A -96 REMARK 465 LYS A -95 REMARK 465 GLU A -94 REMARK 465 HIS A -93 REMARK 465 ILE A -92 REMARK 465 PRO A -91 REMARK 465 GLY A -90 REMARK 465 THR A -89 REMARK 465 LEU A -88 REMARK 465 ARG A -87 REMARK 465 PHE A -86 REMARK 465 ARG A -85 REMARK 465 LEU A -84 REMARK 465 SER A -83 REMARK 465 PRO A -82 REMARK 465 ALA A -81 REMARK 465 ALA A -80 REMARK 465 ARG A -79 REMARK 465 ASN A -78 REMARK 465 ILE A -77 REMARK 465 LEU A -76 REMARK 465 GLU A -75 REMARK 465 LYS A -74 REMARK 465 HIS A -73 REMARK 465 SER A -72 REMARK 465 LEU A -71 REMARK 465 ASP A -70 REMARK 465 ALA A -69 REMARK 465 SER A -68 REMARK 465 GLN A -67 REMARK 465 GLY A -66 REMARK 465 THR A -65 REMARK 465 ALA A -64 REMARK 465 THR A -63 REMARK 465 GLY A -62 REMARK 465 PRO A -61 REMARK 465 ARG A -60 REMARK 465 GLY A -59 REMARK 465 ILE A -58 REMARK 465 PHE A -57 REMARK 465 THR A -56 REMARK 465 LYS A -55 REMARK 465 GLU A -54 REMARK 465 ASP A -53 REMARK 465 ALA A -52 REMARK 465 LEU A -51 REMARK 465 LYS A -50 REMARK 465 LEU A -49 REMARK 465 VAL A -48 REMARK 465 GLN A -47 REMARK 465 LEU A -46 REMARK 465 LYS A -45 REMARK 465 GLN A -44 REMARK 465 THR A -43 REMARK 465 GLY A -42 REMARK 465 LYS A -41 REMARK 465 ILE A -40 REMARK 465 THR A -39 REMARK 465 GLU A -38 REMARK 465 SER A -37 REMARK 465 ARG A -36 REMARK 465 PRO A -35 REMARK 465 THR A -34 REMARK 465 PRO A -33 REMARK 465 ALA A -32 REMARK 465 PRO A -31 REMARK 465 THR A -30 REMARK 465 ALA A -29 REMARK 465 THR A -28 REMARK 465 PRO A -27 REMARK 465 THR A -26 REMARK 465 ALA A -25 REMARK 465 PRO A -24 REMARK 465 SER A -23 REMARK 465 PRO A -22 REMARK 465 LEU A -21 REMARK 465 GLN A -20 REMARK 465 ALA A -19 REMARK 465 THR A -18 REMARK 465 ALA A -17 REMARK 465 GLY A -16 REMARK 465 PRO A -15 REMARK 465 SER A -14 REMARK 465 TYR A -13 REMARK 465 PRO A -12 REMARK 465 ARG A -11 REMARK 465 PRO A -10 REMARK 465 VAL A -9 REMARK 465 ILE A -8 REMARK 465 PRO A -7 REMARK 465 PRO A -6 REMARK 465 VAL A -5 REMARK 465 SER A -4 REMARK 465 THR A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 GLN A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 1 CB CG CD REMARK 470 ASN A 2 CB CG OD1 ND2 REMARK 470 ALA A 3 CB REMARK 470 VAL A 4 CB CG1 CG2 REMARK 470 THR A 6 CB OG1 CG2 REMARK 470 PHE A 7 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR A 8 CB OG1 CG2 REMARK 470 GLU A 9 CB CG CD OE1 OE2 REMARK 470 ILE A 10 CB CG1 CG2 CD1 REMARK 470 PRO A 11 CB CG CD REMARK 470 ALA A 12 CB REMARK 470 SER A 13 CB OG REMARK 470 ASN A 14 CB CG OD1 ND2 REMARK 470 ILE A 15 CB CG1 CG2 CD1 REMARK 470 ARG A 16 CB CG CD NE CZ NH1 NH2 REMARK 470 ARG A 17 CB CG CD NE CZ NH1 NH2 REMARK 470 VAL A 18 CB CG1 CG2 REMARK 470 ILE A 19 CB CG1 CG2 CD1 REMARK 470 ALA A 20 CB REMARK 470 LYS A 21 CB CG CD CE NZ REMARK 470 ARG A 22 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU A 23 CB CG CD1 CD2 REMARK 470 THR A 24 CB OG1 CG2 REMARK 470 GLU A 25 CB CG CD OE1 OE2 REMARK 470 SER A 26 CB OG REMARK 470 LYS A 27 CB CG CD CE NZ REMARK 470 SER A 28 CB OG REMARK 470 THR A 29 CB OG1 CG2 REMARK 470 VAL A 30 CB CG1 CG2 REMARK 470 PRO A 31 CB CG CD REMARK 470 HIS A 32 CB CG ND1 CD2 CE1 NE2 REMARK 470 ALA A 33 CB REMARK 470 TYR A 34 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR A 34 OH REMARK 470 ALA A 35 CB REMARK 470 THR A 36 CB OG1 CG2 REMARK 470 ALA A 37 CB REMARK 470 ASP A 38 CB CG OD1 OD2 REMARK 470 CYS A 39 CB SG REMARK 470 ASP A 40 CB CG OD1 OD2 REMARK 470 LEU A 41 CB CG CD1 CD2 REMARK 470 ALA A 43 CB REMARK 470 VAL A 44 CB CG1 CG2 REMARK 470 LEU A 45 CB CG CD1 CD2 REMARK 470 LYS A 46 CB CG CD CE NZ REMARK 470 VAL A 47 CB CG1 CG2 REMARK 470 ARG A 48 CB CG CD NE CZ NH1 NH2 REMARK 470 GLN A 49 CB CG CD OE1 NE2 REMARK 470 ASP A 50 CB CG OD1 OD2 REMARK 470 LEU A 51 CB CG CD1 CD2 REMARK 470 VAL A 52 CB CG1 CG2 REMARK 470 LYS A 53 CB CG CD CE NZ REMARK 470 ASP A 54 CB CG OD1 OD2 REMARK 470 ASP A 55 CB CG OD1 OD2 REMARK 470 ILE A 56 CB CG1 CG2 CD1 REMARK 470 LYS A 57 CB CG CD CE NZ REMARK 470 VAL A 58 CB CG1 CG2 REMARK 470 SER A 59 CB OG REMARK 470 VAL A 60 CB CG1 CG2 REMARK 470 ASN A 61 CB CG OD1 ND2 REMARK 470 ASP A 62 CB CG OD1 OD2 REMARK 470 PHE A 63 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE A 64 CB CG1 CG2 CD1 REMARK 470 ILE A 65 CB CG1 CG2 CD1 REMARK 470 LYS A 66 CB CG CD CE NZ REMARK 470 ALA A 67 CB REMARK 470 ALA A 68 CB REMARK 470 ALA A 69 CB REMARK 470 VAL A 70 CB CG1 CG2 REMARK 470 THR A 71 CB OG1 CG2 REMARK 470 LEU A 72 CB CG CD1 CD2 REMARK 470 LYS A 73 CB CG CD CE NZ REMARK 470 GLN A 74 CB CG CD OE1 NE2 REMARK 470 MET A 75 CB CG SD CE REMARK 470 PRO A 76 CB CG CD REMARK 470 ASP A 77 CB CG OD1 OD2 REMARK 470 VAL A 78 CB CG1 CG2 REMARK 470 ASN A 79 CB CG OD1 ND2 REMARK 470 VAL A 80 CB CG1 CG2 REMARK 470 SER A 81 CB OG REMARK 470 TRP A 82 CB CG CD1 CD2 NE1 CE2 CE3 REMARK 470 TRP A 82 CZ2 CZ3 CH2 REMARK 470 ASP A 83 CB CG OD1 OD2 REMARK 470 GLU A 85 CB CG CD OE1 OE2 REMARK 470 PRO A 87 CB CG CD REMARK 470 LYS A 88 CB CG CD CE NZ REMARK 470 GLN A 89 CB CG CD OE1 NE2 REMARK 470 LEU A 90 CB CG CD1 CD2 REMARK 470 PRO A 91 CB CG CD REMARK 470 PHE A 92 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE A 93 CB CG1 CG2 CD1 REMARK 470 ASP A 94 CB CG OD1 OD2 REMARK 470 ILE A 95 CB CG1 CG2 CD1 REMARK 470 SER A 96 CB OG REMARK 470 VAL A 97 CB CG1 CG2 REMARK 470 ALA A 98 CB REMARK 470 VAL A 99 CB CG1 CG2 REMARK 470 ALA A 100 CB REMARK 470 THR A 101 CB OG1 CG2 REMARK 470 ASP A 102 CB CG OD1 OD2 REMARK 470 LYS A 103 CB CG CD CE NZ REMARK 470 LEU A 105 CB CG CD1 CD2 REMARK 470 LEU A 106 CB CG CD1 CD2 REMARK 470 THR A 107 CB OG1 CG2 REMARK 470 PRO A 108 CB CG CD REMARK 470 ILE A 109 CB CG1 CG2 CD1 REMARK 470 ILE A 110 CB CG1 CG2 CD1 REMARK 470 LYS A 111 CB CG CD CE NZ REMARK 470 ASP A 112 CB CG OD1 OD2 REMARK 470 ALA A 113 CB REMARK 470 ALA A 114 CB REMARK 470 ALA A 115 CB REMARK 470 LYS A 116 CB CG CD CE NZ REMARK 470 ILE A 118 CB CG1 CG2 CD1 REMARK 470 GLN A 119 CB CG CD OE1 NE2 REMARK 470 GLU A 120 CB CG CD OE1 OE2 REMARK 470 ILE A 121 CB CG1 CG2 CD1 REMARK 470 ALA A 122 CB REMARK 470 ASP A 123 CB CG OD1 OD2 REMARK 470 SER A 124 CB OG REMARK 470 VAL A 125 CB CG1 CG2 REMARK 470 LYS A 126 CB CG CD CE NZ REMARK 470 ALA A 127 CB REMARK 470 LEU A 128 CB CG CD1 CD2 REMARK 470 SER A 129 CB OG REMARK 470 LYS A 130 CB CG CD CE NZ REMARK 470 LYS A 131 CB CG CD CE NZ REMARK 470 ALA A 132 CB REMARK 470 ARG A 133 CB CG CD NE CZ NH1 NH2 REMARK 470 ASP A 134 CB CG OD1 OD2 REMARK 470 LYS A 136 CB CG CD CE NZ REMARK 470 LEU A 137 CB CG CD1 CD2 REMARK 470 LEU A 138 CB CG CD1 CD2 REMARK 470 PRO A 139 CB CG CD REMARK 470 GLU A 140 CB CG CD OE1 OE2 REMARK 470 GLU A 141 CB CG CD OE1 OE2 REMARK 470 TYR A 142 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR A 142 OH REMARK 470 GLN A 143 CB CG CD OE1 NE2 REMARK 470 SER A 146 CB OG REMARK 470 PHE A 147 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 148 CB OG REMARK 470 ILE A 149 CB CG1 CG2 CD1 REMARK 470 SER A 150 CB OG REMARK 470 ASN A 151 CB CG OD1 ND2 REMARK 470 LEU A 152 CB CG CD1 CD2 REMARK 470 MET A 154 CB CG SD CE REMARK 470 PHE A 155 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE A 157 CB CG1 CG2 CD1 REMARK 470 ASP A 158 CB CG OD1 OD2 REMARK 470 GLU A 159 CB CG CD OE1 OE2 REMARK 470 PHE A 160 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR A 161 CB OG1 CG2 REMARK 470 ALA A 162 CB REMARK 470 VAL A 163 CB CG1 CG2 REMARK 470 ILE A 164 CB CG1 CG2 CD1 REMARK 470 ASN A 165 CB CG OD1 ND2 REMARK 470 PRO A 166 CB CG CD REMARK 470 PRO A 167 CB CG CD REMARK 470 GLN A 168 CB CG CD OE1 NE2 REMARK 470 ALA A 169 CB REMARK 470 CYS A 170 CB SG REMARK 470 ILE A 171 CB CG1 CG2 CD1 REMARK 470 LEU A 172 CB CG CD1 CD2 REMARK 470 ALA A 173 CB REMARK 470 VAL A 174 CB CG1 CG2 REMARK 470 ARG A 176 CB CG CD NE CZ NH1 NH2 REMARK 470 PHE A 177 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 178 CB CG CD NE CZ NH1 NH2 REMARK 470 PRO A 179 CB CG CD REMARK 470 VAL A 180 CB CG1 CG2 REMARK 470 LEU A 181 CB CG CD1 CD2 REMARK 470 LYS A 182 CB CG CD CE NZ REMARK 470 LEU A 183 CB CG CD1 CD2 REMARK 470 THR A 184 CB OG1 CG2 REMARK 470 GLU A 185 CB CG CD OE1 OE2 REMARK 470 ASP A 186 CB CG OD1 OD2 REMARK 470 GLU A 187 CB CG CD OE1 OE2 REMARK 470 GLU A 188 CB CG CD OE1 OE2 REMARK 470 ASN A 190 CB CG OD1 ND2 REMARK 470 ALA A 191 CB REMARK 470 LYS A 192 CB CG CD CE NZ REMARK 470 LEU A 193 CB CG CD1 CD2 REMARK 470 GLN A 194 CB CG CD OE1 NE2 REMARK 470 GLN A 195 CB CG CD OE1 NE2 REMARK 470 ARG A 196 CB CG CD NE CZ NH1 NH2 REMARK 470 GLN A 197 CB CG CD OE1 NE2 REMARK 470 LEU A 198 CB CG CD1 CD2 REMARK 470 ILE A 199 CB CG1 CG2 CD1 REMARK 470 THR A 200 CB OG1 CG2 REMARK 470 VAL A 201 CB CG1 CG2 REMARK 470 THR A 202 CB OG1 CG2 REMARK 470 MET A 203 CB CG SD CE REMARK 470 SER A 204 CB OG REMARK 470 SER A 205 CB OG REMARK 470 ASP A 206 CB CG OD1 OD2 REMARK 470 SER A 207 CB OG REMARK 470 ARG A 208 CB CG CD NE CZ NH1 NH2 REMARK 470 VAL A 209 CB CG1 CG2 REMARK 470 VAL A 210 CB CG1 CG2 REMARK 470 ASP A 211 CB CG OD1 OD2 REMARK 470 ASP A 212 CB CG OD1 OD2 REMARK 470 GLU A 213 CB CG CD OE1 OE2 REMARK 470 LEU A 214 CB CG CD1 CD2 REMARK 470 ALA A 215 CB REMARK 470 THR A 216 CB OG1 CG2 REMARK 470 ARG A 217 CB CG CD NE CZ NH1 NH2 REMARK 470 PHE A 218 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 219 CB CG CD1 CD2 REMARK 470 LYS A 220 CB CG CD CE NZ REMARK 470 SER A 221 CB OG REMARK 470 PHE A 222 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 223 CB CG CD CE NZ REMARK 470 ALA A 224 CB REMARK 470 ASN A 225 CB CG OD1 ND2 REMARK 470 LEU A 226 CB CG CD1 CD2 REMARK 470 GLU A 227 CB CG CD OE1 OE2 REMARK 470 ASN A 228 CB CG OD1 ND2 REMARK 470 PRO A 229 CB CG CD REMARK 470 ILE A 230 CB CG1 CG2 CD1 REMARK 470 ARG A 231 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU A 232 CB CG CD1 CD2 REMARK 470 ALA A 233 O CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ALA A 33 O SER A 205 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 9 126.57 -36.66 REMARK 500 GLU A 85 -61.43 -134.89 REMARK 500 PHE A 147 -178.86 -170.45 REMARK 500 PHE A 155 -60.81 -122.45 REMARK 500 ILE A 157 72.16 62.46 REMARK 500 PRO A 179 75.23 -64.50 REMARK 500 LEU A 183 -174.02 -68.61 REMARK 500 ALA A 191 107.40 14.53 REMARK 500 ARG A 208 -72.45 -55.60 REMARK 500 ASN A 228 132.05 -170.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-0138 RELATED DB: EMDB DBREF 6H60 A -267 233 UNP O00330 ODPX_HUMAN 1 501 SEQRES 1 A 501 MET ALA ALA SER TRP ARG LEU GLY CYS ASP PRO ARG LEU SEQRES 2 A 501 LEU ARG TYR LEU VAL GLY PHE PRO GLY ARG ARG SER VAL SEQRES 3 A 501 GLY LEU VAL LYS GLY ALA LEU GLY TRP SER VAL SER ARG SEQRES 4 A 501 GLY ALA ASN TRP ARG TRP PHE HIS SER THR GLN TRP LEU SEQRES 5 A 501 ARG GLY ASP PRO ILE LYS ILE LEU MET PRO SER LEU SER SEQRES 6 A 501 PRO THR MET GLU GLU GLY ASN ILE VAL LYS TRP LEU LYS SEQRES 7 A 501 LYS GLU GLY GLU ALA VAL SER ALA GLY ASP ALA LEU CYS SEQRES 8 A 501 GLU ILE GLU THR ASP LYS ALA VAL VAL THR LEU ASP ALA SEQRES 9 A 501 SER ASP ASP GLY ILE LEU ALA LYS ILE VAL VAL GLU GLU SEQRES 10 A 501 GLY SER LYS ASN ILE ARG LEU GLY SER LEU ILE GLY LEU SEQRES 11 A 501 ILE VAL GLU GLU GLY GLU ASP TRP LYS HIS VAL GLU ILE SEQRES 12 A 501 PRO LYS ASP VAL GLY PRO PRO PRO PRO VAL SER LYS PRO SEQRES 13 A 501 SER GLU PRO ARG PRO SER PRO GLU PRO GLN ILE SER ILE SEQRES 14 A 501 PRO VAL LYS LYS GLU HIS ILE PRO GLY THR LEU ARG PHE SEQRES 15 A 501 ARG LEU SER PRO ALA ALA ARG ASN ILE LEU GLU LYS HIS SEQRES 16 A 501 SER LEU ASP ALA SER GLN GLY THR ALA THR GLY PRO ARG SEQRES 17 A 501 GLY ILE PHE THR LYS GLU ASP ALA LEU LYS LEU VAL GLN SEQRES 18 A 501 LEU LYS GLN THR GLY LYS ILE THR GLU SER ARG PRO THR SEQRES 19 A 501 PRO ALA PRO THR ALA THR PRO THR ALA PRO SER PRO LEU SEQRES 20 A 501 GLN ALA THR ALA GLY PRO SER TYR PRO ARG PRO VAL ILE SEQRES 21 A 501 PRO PRO VAL SER THR PRO GLY GLN PRO ASN ALA VAL GLY SEQRES 22 A 501 THR PHE THR GLU ILE PRO ALA SER ASN ILE ARG ARG VAL SEQRES 23 A 501 ILE ALA LYS ARG LEU THR GLU SER LYS SER THR VAL PRO SEQRES 24 A 501 HIS ALA TYR ALA THR ALA ASP CYS ASP LEU GLY ALA VAL SEQRES 25 A 501 LEU LYS VAL ARG GLN ASP LEU VAL LYS ASP ASP ILE LYS SEQRES 26 A 501 VAL SER VAL ASN ASP PHE ILE ILE LYS ALA ALA ALA VAL SEQRES 27 A 501 THR LEU LYS GLN MET PRO ASP VAL ASN VAL SER TRP ASP SEQRES 28 A 501 GLY GLU GLY PRO LYS GLN LEU PRO PHE ILE ASP ILE SER SEQRES 29 A 501 VAL ALA VAL ALA THR ASP LYS GLY LEU LEU THR PRO ILE SEQRES 30 A 501 ILE LYS ASP ALA ALA ALA LYS GLY ILE GLN GLU ILE ALA SEQRES 31 A 501 ASP SER VAL LYS ALA LEU SER LYS LYS ALA ARG ASP GLY SEQRES 32 A 501 LYS LEU LEU PRO GLU GLU TYR GLN GLY GLY SER PHE SER SEQRES 33 A 501 ILE SER ASN LEU GLY MET PHE GLY ILE ASP GLU PHE THR SEQRES 34 A 501 ALA VAL ILE ASN PRO PRO GLN ALA CYS ILE LEU ALA VAL SEQRES 35 A 501 GLY ARG PHE ARG PRO VAL LEU LYS LEU THR GLU ASP GLU SEQRES 36 A 501 GLU GLY ASN ALA LYS LEU GLN GLN ARG GLN LEU ILE THR SEQRES 37 A 501 VAL THR MET SER SER ASP SER ARG VAL VAL ASP ASP GLU SEQRES 38 A 501 LEU ALA THR ARG PHE LEU LYS SER PHE LYS ALA ASN LEU SEQRES 39 A 501 GLU ASN PRO ILE ARG LEU ALA HELIX 1 AA1 SER A 13 VAL A 30 1 18 HELIX 2 AA2 LEU A 41 VAL A 52 1 12 HELIX 3 AA3 SER A 59 MET A 75 1 17 HELIX 4 AA4 ASP A 112 LYS A 116 5 5 HELIX 5 AA5 GLY A 117 ASP A 134 1 18 HELIX 6 AA6 LEU A 138 GLN A 143 5 6 HELIX 7 AA7 ASP A 211 GLU A 227 1 17 HELIX 8 AA8 ASN A 228 LEU A 232 5 5 SHEET 1 AA1 6 HIS A 32 CYS A 39 0 SHEET 2 AA1 6 GLN A 194 ASP A 206 -1 O SER A 205 N ALA A 33 SHEET 3 AA1 6 CYS A 170 LYS A 182 -1 N ALA A 173 O THR A 202 SHEET 4 AA1 6 PHE A 147 ASN A 151 1 N SER A 150 O LEU A 172 SHEET 5 AA1 6 ILE A 95 VAL A 97 1 N SER A 96 O ILE A 149 SHEET 6 AA1 6 ILE A 109 ILE A 110 -1 O ILE A 110 N ILE A 95 SHEET 1 AA2 2 VAL A 80 ASP A 83 0 SHEET 2 AA2 2 GLY A 86 GLN A 89 -1 O LYS A 88 N SER A 81 CISPEP 1 PRO A 166 PRO A 167 0 -5.60 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000