PDB Short entry for 6J99 HEADER TRANSCRIPTION 22-JAN-19 6J99 TITLE CRYO-EM STRUCTURE OF HUMAN DOT1L IN COMPLEX WITH AN H2B- TITLE 2 MONOUBIQUITINATED NUCLEOSOME COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H3; COMPND 3 CHAIN: A, E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HISTONE H4; COMPND 7 CHAIN: B, F; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HISTONE H2A; COMPND 11 CHAIN: C, G; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: HISTONE H2B 1.1; COMPND 15 CHAIN: D, H; COMPND 16 SYNONYM: H2B1.1; COMPND 17 ENGINEERED: YES; COMPND 18 MUTATION: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: DNA (144-MER); COMPND 21 CHAIN: I; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 6; COMPND 24 MOLECULE: DNA (145-MER); COMPND 25 CHAIN: J; COMPND 26 ENGINEERED: YES; COMPND 27 MOL_ID: 7; COMPND 28 MOLECULE: UBIQUITIN; COMPND 29 CHAIN: L; COMPND 30 ENGINEERED: YES; COMPND 31 MUTATION: YES; COMPND 32 MOL_ID: 8; COMPND 33 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-79 SPECIFIC; COMPND 34 CHAIN: K; COMPND 35 SYNONYM: DOT1-LIKE PROTEIN,HISTONE H3-K79 METHYLTRANSFERASE,H3-K79- COMPND 36 HMTASE,LYSINE N-METHYLTRANSFERASE 4; COMPND 37 EC: 2.1.1.43; COMPND 38 ENGINEERED: YES; COMPND 39 OTHER_DETAILS: S-ADENOSYL-L-HOMOCYSTEINE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 3 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8355; SOURCE 5 GENE: XELAEV_18002543MG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 10 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 11 ORGANISM_TAXID: 8355; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 16 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 17 ORGANISM_TAXID: 8355; SOURCE 18 GENE: HIST1H2AJ, LOC494591, XELAEV_18003602MG; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 21 MOL_ID: 4; SOURCE 22 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 23 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 24 ORGANISM_TAXID: 8355; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 27 MOL_ID: 5; SOURCE 28 SYNTHETIC: YES; SOURCE 29 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 30 ORGANISM_TAXID: 32630; SOURCE 31 MOL_ID: 6; SOURCE 32 SYNTHETIC: YES; SOURCE 33 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 34 ORGANISM_TAXID: 32630; SOURCE 35 MOL_ID: 7; SOURCE 36 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 37 ORGANISM_COMMON: HUMAN; SOURCE 38 ORGANISM_TAXID: 9606; SOURCE 39 GENE: RPS27A, UBA80, UBCEP1; SOURCE 40 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 41 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 42 MOL_ID: 8; SOURCE 43 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 44 ORGANISM_COMMON: HUMAN; SOURCE 45 ORGANISM_TAXID: 9606; SOURCE 46 GENE: DOT1L, KIAA1814, KMT4; SOURCE 47 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 48 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS EPIGENETICS, NUCLEOSOME, DOT1L, HISTONE MODIFICATION, TRANSCRIPTION EXPDTA ELECTRON MICROSCOPY AUTHOR T.YAO,J.HUANG REVDAT 2 10-APR-19 6J99 1 JRNL REVDAT 1 27-FEB-19 6J99 0 JRNL AUTH T.YAO,W.JING,Z.HU,M.TAN,M.CAO,Q.WANG,Y.LI,G.YUAN,M.LEI, JRNL AUTH 2 J.HUANG JRNL TITL STRUCTURAL BASIS OF THE CROSSTALK BETWEEN HISTONE H2B JRNL TITL 2 MONOUBIQUITINATION AND H3 LYSINE 79 METHYLATION ON JRNL TITL 3 NUCLEOSOME. JRNL REF CELL RES. V. 29 330 2019 JRNL REFN ISSN 1748-7838 JRNL PMID 30770869 JRNL DOI 10.1038/S41422-019-0146-7 REMARK 2 REMARK 2 RESOLUTION. 4.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.100 REMARK 3 NUMBER OF PARTICLES : 151545 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING ONLY REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6J99 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1300010686. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN DOT1L IN COMPLEX WITH AN REMARK 245 H2B-MONOUBIQUITINATED REMARK 245 NUCLEOSOME; HUMAN DOT1L IN REMARK 245 COMPLEX WITH AN H2B- REMARK 245 MONOUBIQUITINATED NUCLEOSOME; REMARK 245 HUMAN DOT1L IN COMPLEX WITH AN REMARK 245 H2B-MONOUBIQUITINATED NUCLEOSOME REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 0.98 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: L, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 ARG A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 ARG A 8 REMARK 465 LYS A 9 REMARK 465 SER A 10 REMARK 465 THR A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 13 REMARK 465 LYS A 14 REMARK 465 ALA A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 LYS A 18 REMARK 465 GLN A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 THR A 22 REMARK 465 LYS A 23 REMARK 465 ALA A 24 REMARK 465 ALA A 25 REMARK 465 ARG A 26 REMARK 465 LYS A 27 REMARK 465 SER A 28 REMARK 465 ALA A 29 REMARK 465 PRO A 30 REMARK 465 ALA A 31 REMARK 465 THR A 32 REMARK 465 GLY A 33 REMARK 465 GLY A 34 REMARK 465 VAL A 35 REMARK 465 LYS A 36 REMARK 465 LYS A 37 REMARK 465 ALA A 135 REMARK 465 MET B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ARG B 3 REMARK 465 GLY B 4 REMARK 465 LYS B 5 REMARK 465 GLY B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 GLY B 9 REMARK 465 LEU B 10 REMARK 465 GLY B 11 REMARK 465 LYS B 12 REMARK 465 GLY B 13 REMARK 465 GLY B 14 REMARK 465 ALA B 15 REMARK 465 GLY B 102 REMARK 465 MET C 0 REMARK 465 SER C 1 REMARK 465 GLY C 2 REMARK 465 ARG C 3 REMARK 465 GLY C 4 REMARK 465 LYS C 5 REMARK 465 GLN C 6 REMARK 465 GLY C 7 REMARK 465 GLY C 8 REMARK 465 LYS C 9 REMARK 465 THR C 10 REMARK 465 LYS C 119 REMARK 465 THR C 120 REMARK 465 GLU C 121 REMARK 465 SER C 122 REMARK 465 SER C 123 REMARK 465 LYS C 124 REMARK 465 SER C 125 REMARK 465 ALA C 126 REMARK 465 LYS C 127 REMARK 465 SER C 128 REMARK 465 LYS C 129 REMARK 465 MET D 0 REMARK 465 ALA D 1 REMARK 465 LYS D 2 REMARK 465 SER D 3 REMARK 465 ALA D 4 REMARK 465 PRO D 5 REMARK 465 ALA D 6 REMARK 465 PRO D 7 REMARK 465 LYS D 8 REMARK 465 LYS D 9 REMARK 465 GLY D 10 REMARK 465 SER D 11 REMARK 465 LYS D 12 REMARK 465 LYS D 13 REMARK 465 ALA D 14 REMARK 465 VAL D 15 REMARK 465 THR D 16 REMARK 465 LYS D 17 REMARK 465 THR D 18 REMARK 465 GLN D 19 REMARK 465 LYS D 20 REMARK 465 LYS D 21 REMARK 465 ASP D 22 REMARK 465 GLY D 23 REMARK 465 LYS D 24 REMARK 465 LYS D 25 REMARK 465 ARG D 26 REMARK 465 ALA D 121 REMARK 465 LYS D 122 REMARK 465 MET E 0 REMARK 465 ALA E 1 REMARK 465 ARG E 2 REMARK 465 THR E 3 REMARK 465 LYS E 4 REMARK 465 GLN E 5 REMARK 465 THR E 6 REMARK 465 ALA E 7 REMARK 465 ARG E 8 REMARK 465 LYS E 9 REMARK 465 SER E 10 REMARK 465 THR E 11 REMARK 465 GLY E 12 REMARK 465 GLY E 13 REMARK 465 LYS E 14 REMARK 465 ALA E 15 REMARK 465 PRO E 16 REMARK 465 ARG E 17 REMARK 465 LYS E 18 REMARK 465 GLN E 19 REMARK 465 LEU E 20 REMARK 465 ALA E 21 REMARK 465 THR E 22 REMARK 465 LYS E 23 REMARK 465 ALA E 24 REMARK 465 ALA E 25 REMARK 465 ARG E 26 REMARK 465 LYS E 27 REMARK 465 SER E 28 REMARK 465 ALA E 29 REMARK 465 PRO E 30 REMARK 465 ALA E 31 REMARK 465 THR E 32 REMARK 465 GLY E 33 REMARK 465 GLY E 34 REMARK 465 VAL E 35 REMARK 465 LYS E 36 REMARK 465 LYS E 37 REMARK 465 ALA E 135 REMARK 465 MET F 0 REMARK 465 SER F 1 REMARK 465 GLY F 2 REMARK 465 ARG F 3 REMARK 465 GLY F 4 REMARK 465 LYS F 5 REMARK 465 GLY F 6 REMARK 465 GLY F 7 REMARK 465 LYS F 8 REMARK 465 GLY F 9 REMARK 465 LEU F 10 REMARK 465 GLY F 11 REMARK 465 LYS F 12 REMARK 465 GLY F 13 REMARK 465 GLY F 14 REMARK 465 ALA F 15 REMARK 465 LYS F 16 REMARK 465 ARG F 17 REMARK 465 HIS F 18 REMARK 465 ARG F 19 REMARK 465 LYS F 20 REMARK 465 GLY F 102 REMARK 465 MET G 0 REMARK 465 SER G 1 REMARK 465 GLY G 2 REMARK 465 ARG G 3 REMARK 465 GLY G 4 REMARK 465 LYS G 5 REMARK 465 GLN G 6 REMARK 465 GLY G 7 REMARK 465 GLY G 8 REMARK 465 LYS G 9 REMARK 465 THR G 10 REMARK 465 ARG G 11 REMARK 465 ALA G 12 REMARK 465 LYS G 118 REMARK 465 LYS G 119 REMARK 465 THR G 120 REMARK 465 GLU G 121 REMARK 465 SER G 122 REMARK 465 SER G 123 REMARK 465 LYS G 124 REMARK 465 SER G 125 REMARK 465 ALA G 126 REMARK 465 LYS G 127 REMARK 465 SER G 128 REMARK 465 LYS G 129 REMARK 465 MET H 0 REMARK 465 ALA H 1 REMARK 465 LYS H 2 REMARK 465 SER H 3 REMARK 465 ALA H 4 REMARK 465 PRO H 5 REMARK 465 ALA H 6 REMARK 465 PRO H 7 REMARK 465 LYS H 8 REMARK 465 LYS H 9 REMARK 465 GLY H 10 REMARK 465 SER H 11 REMARK 465 LYS H 12 REMARK 465 LYS H 13 REMARK 465 ALA H 14 REMARK 465 VAL H 15 REMARK 465 THR H 16 REMARK 465 LYS H 17 REMARK 465 THR H 18 REMARK 465 GLN H 19 REMARK 465 LYS H 20 REMARK 465 LYS H 21 REMARK 465 ASP H 22 REMARK 465 GLY H 23 REMARK 465 LYS H 24 REMARK 465 LYS H 25 REMARK 465 ARG H 26 REMARK 465 ARG H 27 REMARK 465 DA I 1 REMARK 465 DT I 2 REMARK 465 DT I 147 REMARK 465 DA J 1 REMARK 465 DT J 147 REMARK 465 MET K 1 REMARK 465 GLY K 2 REMARK 465 GLU K 3 REMARK 465 LYS K 4 REMARK 465 LEU K 5 REMARK 465 GLU K 6 REMARK 465 LEU K 7 REMARK 465 PRO K 332 REMARK 465 LYS K 333 REMARK 465 LEU K 334 REMARK 465 ARG K 335 REMARK 465 GLU K 336 REMARK 465 GLU K 337 REMARK 465 GLN K 338 REMARK 465 GLU K 339 REMARK 465 ALA K 340 REMARK 465 ALA K 341 REMARK 465 ARG K 342 REMARK 465 ARG K 343 REMARK 465 ARG K 344 REMARK 465 GLN K 345 REMARK 465 GLN K 346 REMARK 465 ARG K 347 REMARK 465 GLU K 348 REMARK 465 SER K 349 REMARK 465 LYS K 350 REMARK 465 SER K 351 REMARK 465 ASN K 352 REMARK 465 ALA K 353 REMARK 465 ALA K 354 REMARK 465 THR K 355 REMARK 465 PRO K 356 REMARK 465 THR K 357 REMARK 465 LYS K 358 REMARK 465 GLY K 359 REMARK 465 PRO K 360 REMARK 465 GLU K 361 REMARK 465 GLY K 362 REMARK 465 LYS K 363 REMARK 465 VAL K 364 REMARK 465 ALA K 365 REMARK 465 GLY K 366 REMARK 465 PRO K 367 REMARK 465 ALA K 368 REMARK 465 ASP K 369 REMARK 465 ALA K 370 REMARK 465 PRO K 371 REMARK 465 MET K 372 REMARK 465 ASP K 373 REMARK 465 SER K 374 REMARK 465 GLY K 375 REMARK 465 ALA K 376 REMARK 465 GLU K 377 REMARK 465 GLU K 378 REMARK 465 GLU K 379 REMARK 465 LYS K 380 REMARK 465 ALA K 381 REMARK 465 GLY K 382 REMARK 465 ALA K 383 REMARK 465 ALA K 384 REMARK 465 THR K 385 REMARK 465 VAL K 386 REMARK 465 LYS K 387 REMARK 465 LYS K 388 REMARK 465 PRO K 389 REMARK 465 SER K 390 REMARK 465 PRO K 391 REMARK 465 SER K 392 REMARK 465 LYS K 393 REMARK 465 ALA K 394 REMARK 465 ARG K 395 REMARK 465 LYS K 396 REMARK 465 LYS K 397 REMARK 465 LYS K 398 REMARK 465 LEU K 399 REMARK 465 ASN K 400 REMARK 465 LYS K 401 REMARK 465 LYS K 402 REMARK 465 GLY K 403 REMARK 465 ARG K 404 REMARK 465 LYS K 405 REMARK 465 MET K 406 REMARK 465 ALA K 407 REMARK 465 GLY K 408 REMARK 465 ARG K 409 REMARK 465 LYS K 410 REMARK 465 ARG K 411 REMARK 465 GLY K 412 REMARK 465 ARG K 413 REMARK 465 PRO K 414 REMARK 465 LYS K 415 REMARK 465 LYS K 416 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD1 PHE K 223 N6 SAH K 501 1.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG I 16 C3' - C2' - C1' ANGL. DEV. = -5.2 DEGREES REMARK 500 DA I 20 C3' - C2' - C1' ANGL. DEV. = -4.8 DEGREES REMARK 500 DG I 21 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG I 33 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DA I 39 O4' - C4' - C3' ANGL. DEV. = -2.4 DEGREES REMARK 500 DG I 40 C3' - C2' - C1' ANGL. DEV. = -5.5 DEGREES REMARK 500 DG I 44 O4' - C1' - N9 ANGL. DEV. = 3.9 DEGREES REMARK 500 DC I 45 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC I 51 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC I 54 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC I 56 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 DA I 60 C3' - C2' - C1' ANGL. DEV. = -5.2 DEGREES REMARK 500 DA I 60 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DA I 61 C3' - C2' - C1' ANGL. DEV. = -5.4 DEGREES REMARK 500 DC I 84 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DG I 126 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC J 3 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DA J 40 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT J 50 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA J 60 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC J 72 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG J 82 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT J 83 C3' - C2' - C1' ANGL. DEV. = -4.8 DEGREES REMARK 500 DT J 83 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT J 87 C3' - C2' - C1' ANGL. DEV. = -5.1 DEGREES REMARK 500 DT J 89 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DC J 111 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 50 -12.79 77.93 REMARK 500 LYS A 56 -64.13 -92.76 REMARK 500 GLU A 59 -71.10 -116.92 REMARK 500 LEU A 60 -40.68 -138.17 REMARK 500 ARG B 19 -4.93 68.03 REMARK 500 LEU C 23 -168.01 -127.15 REMARK 500 LYS D 82 66.65 61.30 REMARK 500 GLU E 50 -12.82 77.97 REMARK 500 LYS E 56 -64.08 -92.72 REMARK 500 GLU E 59 -71.13 -116.86 REMARK 500 LEU E 60 -40.70 -138.15 REMARK 500 THR F 96 67.82 61.32 REMARK 500 THR G 16 70.87 58.06 REMARK 500 GLN G 104 -2.09 66.96 REMARK 500 THR H 87 -169.63 -118.60 REMARK 500 GLU K 47 -162.74 -79.37 REMARK 500 THR K 92 37.20 -99.51 REMARK 500 ASN K 99 3.75 -68.96 REMARK 500 PRO K 130 -169.85 -70.38 REMARK 500 GLU K 134 8.66 -69.99 REMARK 500 ASN K 178 36.64 -97.95 REMARK 500 SER K 269 -62.66 -94.84 REMARK 500 ASN K 280 -159.65 -139.46 REMARK 500 PRO K 298 -167.61 -73.89 REMARK 500 SER K 304 -156.78 -89.32 REMARK 500 SER K 311 70.54 62.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO H 100 GLY H 101 -145.87 REMARK 500 SER K 304 TRP K 305 148.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide SAH K 501 and PHE K REMARK 800 223 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-9783 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF HUMAN DOT1L IN COMPLEX WITH AN H2B- REMARK 900 MONOUBIQUITINATED NUCLEOSOME DBREF1 6J99 A 0 135 UNP A0A310TTQ1_XENLA DBREF2 6J99 A A0A310TTQ1 1 136 DBREF 6J99 B 0 102 UNP P62799 H4_XENLA 1 103 DBREF 6J99 C 0 129 UNP Q6AZJ8 Q6AZJ8_XENLA 1 130 DBREF 6J99 D 1 122 UNP P02281 H2B11_XENLA 5 126 DBREF1 6J99 E 0 135 UNP A0A310TTQ1_XENLA DBREF2 6J99 E A0A310TTQ1 1 136 DBREF 6J99 F 0 102 UNP P62799 H4_XENLA 1 103 DBREF 6J99 G 0 129 UNP Q6AZJ8 Q6AZJ8_XENLA 1 130 DBREF 6J99 H 1 122 UNP P02281 H2B11_XENLA 5 126 DBREF 6J99 I 1 147 PDB 6J99 6J99 1 147 DBREF 6J99 J 1 147 PDB 6J99 6J99 1 147 DBREF 6J99 L 1 76 UNP P62979 RS27A_HUMAN 1 76 DBREF 6J99 K 1 416 UNP Q8TEK3 DOT1L_HUMAN 1 416 SEQADV 6J99 MET D 0 UNP P02281 INITIATING METHIONINE SEQADV 6J99 THR D 29 UNP P02281 SER 33 ENGINEERED MUTATION SEQADV 6J99 CYS D 117 UNP P02281 LYS 121 ENGINEERED MUTATION SEQADV 6J99 MET H 0 UNP P02281 INITIATING METHIONINE SEQADV 6J99 THR H 29 UNP P02281 SER 33 ENGINEERED MUTATION SEQADV 6J99 CYS H 117 UNP P02281 LYS 121 ENGINEERED MUTATION SEQADV 6J99 CYS L 76 UNP P62979 GLY 76 ENGINEERED MUTATION SEQRES 1 A 136 MET ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY SEQRES 2 A 136 GLY LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA SEQRES 3 A 136 ARG LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO SEQRES 4 A 136 HIS ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE SEQRES 5 A 136 ARG ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS SEQRES 6 A 136 LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP SEQRES 7 A 136 PHE LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET SEQRES 8 A 136 ALA LEU GLN GLU ALA SER GLU ALA TYR LEU VAL ALA LEU SEQRES 9 A 136 PHE GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG SEQRES 10 A 136 VAL THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG SEQRES 11 A 136 ILE ARG GLY GLU ARG ALA SEQRES 1 B 103 MET SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS SEQRES 2 B 103 GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN SEQRES 3 B 103 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 4 B 103 ARG ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR SEQRES 5 B 103 GLU GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN SEQRES 6 B 103 VAL ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS SEQRES 7 B 103 ARG LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU SEQRES 8 B 103 LYS ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 C 130 MET SER GLY ARG GLY LYS GLN GLY GLY LYS THR ARG ALA SEQRES 2 C 130 LYS ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE SEQRES 3 C 130 PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN SEQRES 4 C 130 TYR ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU SEQRES 5 C 130 ALA ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU SEQRES 6 C 130 LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG SEQRES 7 C 130 ILE ILE PRO ARG HIS LEU GLN LEU ALA VAL ARG ASN ASP SEQRES 8 C 130 GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA SEQRES 9 C 130 GLN GLY GLY VAL LEU PRO ASN ILE GLN SER VAL LEU LEU SEQRES 10 C 130 PRO LYS LYS THR GLU SER SER LYS SER ALA LYS SER LYS SEQRES 1 D 123 MET ALA LYS SER ALA PRO ALA PRO LYS LYS GLY SER LYS SEQRES 2 D 123 LYS ALA VAL THR LYS THR GLN LYS LYS ASP GLY LYS LYS SEQRES 3 D 123 ARG ARG LYS THR ARG LYS GLU SER TYR ALA ILE TYR VAL SEQRES 4 D 123 TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP THR GLY ILE SEQRES 5 D 123 SER SER LYS ALA MET SER ILE MET ASN SER PHE VAL ASN SEQRES 6 D 123 ASP VAL PHE GLU ARG ILE ALA GLY GLU ALA SER ARG LEU SEQRES 7 D 123 ALA HIS TYR ASN LYS ARG SER THR ILE THR SER ARG GLU SEQRES 8 D 123 ILE GLN THR ALA VAL ARG LEU LEU LEU PRO GLY GLU LEU SEQRES 9 D 123 ALA LYS HIS ALA VAL SER GLU GLY THR LYS ALA VAL THR SEQRES 10 D 123 CYS TYR THR SER ALA LYS SEQRES 1 E 136 MET ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY SEQRES 2 E 136 GLY LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA SEQRES 3 E 136 ARG LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO SEQRES 4 E 136 HIS ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE SEQRES 5 E 136 ARG ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS SEQRES 6 E 136 LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP SEQRES 7 E 136 PHE LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET SEQRES 8 E 136 ALA LEU GLN GLU ALA SER GLU ALA TYR LEU VAL ALA LEU SEQRES 9 E 136 PHE GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG SEQRES 10 E 136 VAL THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG SEQRES 11 E 136 ILE ARG GLY GLU ARG ALA SEQRES 1 F 103 MET SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS SEQRES 2 F 103 GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN SEQRES 3 F 103 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 4 F 103 ARG ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR SEQRES 5 F 103 GLU GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN SEQRES 6 F 103 VAL ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS SEQRES 7 F 103 ARG LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU SEQRES 8 F 103 LYS ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 G 130 MET SER GLY ARG GLY LYS GLN GLY GLY LYS THR ARG ALA SEQRES 2 G 130 LYS ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE SEQRES 3 G 130 PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN SEQRES 4 G 130 TYR ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU SEQRES 5 G 130 ALA ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU SEQRES 6 G 130 LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG SEQRES 7 G 130 ILE ILE PRO ARG HIS LEU GLN LEU ALA VAL ARG ASN ASP SEQRES 8 G 130 GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA SEQRES 9 G 130 GLN GLY GLY VAL LEU PRO ASN ILE GLN SER VAL LEU LEU SEQRES 10 G 130 PRO LYS LYS THR GLU SER SER LYS SER ALA LYS SER LYS SEQRES 1 H 123 MET ALA LYS SER ALA PRO ALA PRO LYS LYS GLY SER LYS SEQRES 2 H 123 LYS ALA VAL THR LYS THR GLN LYS LYS ASP GLY LYS LYS SEQRES 3 H 123 ARG ARG LYS THR ARG LYS GLU SER TYR ALA ILE TYR VAL SEQRES 4 H 123 TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP THR GLY ILE SEQRES 5 H 123 SER SER LYS ALA MET SER ILE MET ASN SER PHE VAL ASN SEQRES 6 H 123 ASP VAL PHE GLU ARG ILE ALA GLY GLU ALA SER ARG LEU SEQRES 7 H 123 ALA HIS TYR ASN LYS ARG SER THR ILE THR SER ARG GLU SEQRES 8 H 123 ILE GLN THR ALA VAL ARG LEU LEU LEU PRO GLY GLU LEU SEQRES 9 H 123 ALA LYS HIS ALA VAL SER GLU GLY THR LYS ALA VAL THR SEQRES 10 H 123 CYS TYR THR SER ALA LYS SEQRES 1 I 147 DA DT DC DG DA DG DA DA DT DC DC DC DG SEQRES 2 I 147 DG DT DG DC DC DG DA DG DG DC DC DG DC SEQRES 3 I 147 DT DC DA DA DT DT DG DG DT DC DG DT DA SEQRES 4 I 147 DG DA DC DA DG DC DT DC DT DA DG DC DA SEQRES 5 I 147 DC DC DG DC DT DT DA DA DA DC DG DC DA SEQRES 6 I 147 DC DG DT DA DC DG DC DG DC DT DG DT DC SEQRES 7 I 147 DC DC DC DC DG DC DG DT DT DT DT DA DA SEQRES 8 I 147 DC DC DG DC DC DA DA DG DG DG DG DA DT SEQRES 9 I 147 DT DA DC DT DC DC DC DT DA DG DT DC DT SEQRES 10 I 147 DC DC DA DG DG DC DA DC DG DT DG DT DC SEQRES 11 I 147 DA DG DA DT DA DT DA DT DA DC DA DT DC SEQRES 12 I 147 DC DG DA DT SEQRES 1 J 147 DA DT DC DG DG DA DT DG DT DA DT DA DT SEQRES 2 J 147 DA DT DC DT DG DA DC DA DC DG DT DG DC SEQRES 3 J 147 DC DT DG DG DA DG DA DC DT DA DG DG DG SEQRES 4 J 147 DA DG DT DA DA DT DC DC DC DC DT DT DG SEQRES 5 J 147 DG DC DG DG DT DT DA DA DA DA DC DG DC SEQRES 6 J 147 DG DG DG DG DG DA DC DA DG DC DG DC DG SEQRES 7 J 147 DT DA DC DG DT DG DC DG DT DT DT DA DA SEQRES 8 J 147 DG DC DG DG DT DG DC DT DA DG DA DG DC SEQRES 9 J 147 DT DG DT DC DT DA DC DG DA DC DC DA DA SEQRES 10 J 147 DT DT DG DA DG DC DG DG DC DC DT DC DG SEQRES 11 J 147 DG DC DA DC DC DG DG DG DA DT DT DC DT SEQRES 12 J 147 DC DG DA DT SEQRES 1 L 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 L 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 L 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 L 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 L 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 L 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY CYS SEQRES 1 K 416 MET GLY GLU LYS LEU GLU LEU ARG LEU LYS SER PRO VAL SEQRES 2 K 416 GLY ALA GLU PRO ALA VAL TYR PRO TRP PRO LEU PRO VAL SEQRES 3 K 416 TYR ASP LYS HIS HIS ASP ALA ALA HIS GLU ILE ILE GLU SEQRES 4 K 416 THR ILE ARG TRP VAL CYS GLU GLU ILE PRO ASP LEU LYS SEQRES 5 K 416 LEU ALA MET GLU ASN TYR VAL LEU ILE ASP TYR ASP THR SEQRES 6 K 416 LYS SER PHE GLU SER MET GLN ARG LEU CYS ASP LYS TYR SEQRES 7 K 416 ASN ARG ALA ILE ASP SER ILE HIS GLN LEU TRP LYS GLY SEQRES 8 K 416 THR THR GLN PRO MET LYS LEU ASN THR ARG PRO SER THR SEQRES 9 K 416 GLY LEU LEU ARG HIS ILE LEU GLN GLN VAL TYR ASN HIS SEQRES 10 K 416 SER VAL THR ASP PRO GLU LYS LEU ASN ASN TYR GLU PRO SEQRES 11 K 416 PHE SER PRO GLU VAL TYR GLY GLU THR SER PHE ASP LEU SEQRES 12 K 416 VAL ALA GLN MET ILE ASP GLU ILE LYS MET THR ASP ASP SEQRES 13 K 416 ASP LEU PHE VAL ASP LEU GLY SER GLY VAL GLY GLN VAL SEQRES 14 K 416 VAL LEU GLN VAL ALA ALA ALA THR ASN CYS LYS HIS HIS SEQRES 15 K 416 TYR GLY VAL GLU LYS ALA ASP ILE PRO ALA LYS TYR ALA SEQRES 16 K 416 GLU THR MET ASP ARG GLU PHE ARG LYS TRP MET LYS TRP SEQRES 17 K 416 TYR GLY LYS LYS HIS ALA GLU TYR THR LEU GLU ARG GLY SEQRES 18 K 416 ASP PHE LEU SER GLU GLU TRP ARG GLU ARG ILE ALA ASN SEQRES 19 K 416 THR SER VAL ILE PHE VAL ASN ASN PHE ALA PHE GLY PRO SEQRES 20 K 416 GLU VAL ASP HIS GLN LEU LYS GLU ARG PHE ALA ASN MET SEQRES 21 K 416 LYS GLU GLY GLY ARG ILE VAL SER SER LYS PRO PHE ALA SEQRES 22 K 416 PRO LEU ASN PHE ARG ILE ASN SER ARG ASN LEU SER ASP SEQRES 23 K 416 ILE GLY THR ILE MET ARG VAL VAL GLU LEU SER PRO LEU SEQRES 24 K 416 LYS GLY SER VAL SER TRP THR GLY LYS PRO VAL SER TYR SEQRES 25 K 416 TYR LEU HIS THR ILE ASP ARG THR ILE LEU GLU ASN TYR SEQRES 26 K 416 PHE SER SER LEU LYS ASN PRO LYS LEU ARG GLU GLU GLN SEQRES 27 K 416 GLU ALA ALA ARG ARG ARG GLN GLN ARG GLU SER LYS SER SEQRES 28 K 416 ASN ALA ALA THR PRO THR LYS GLY PRO GLU GLY LYS VAL SEQRES 29 K 416 ALA GLY PRO ALA ASP ALA PRO MET ASP SER GLY ALA GLU SEQRES 30 K 416 GLU GLU LYS ALA GLY ALA ALA THR VAL LYS LYS PRO SER SEQRES 31 K 416 PRO SER LYS ALA ARG LYS LYS LYS LEU ASN LYS LYS GLY SEQRES 32 K 416 ARG LYS MET ALA GLY ARG LYS ARG GLY ARG PRO LYS LYS HET SAH K 501 26 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE FORMUL 13 SAH C14 H20 N6 O5 S HELIX 1 AA1 GLY A 44 SER A 57 1 14 HELIX 2 AA2 ARG A 63 ASP A 77 1 15 HELIX 3 AA3 GLN A 85 ALA A 114 1 30 HELIX 4 AA4 MET A 120 GLY A 132 1 13 HELIX 5 AA5 ASN B 25 ILE B 29 5 5 HELIX 6 AA6 THR B 30 GLY B 42 1 13 HELIX 7 AA7 LEU B 49 ALA B 76 1 28 HELIX 8 AA8 THR B 82 GLN B 93 1 12 HELIX 9 AA9 THR C 16 ALA C 21 1 6 HELIX 10 AB1 PRO C 26 GLY C 37 1 12 HELIX 11 AB2 ALA C 45 ASN C 73 1 29 HELIX 12 AB3 ILE C 79 ASP C 90 1 12 HELIX 13 AB4 ASP C 90 LEU C 97 1 8 HELIX 14 AB5 GLN C 112 LEU C 116 5 5 HELIX 15 AB6 TYR D 34 HIS D 46 1 13 HELIX 16 AB7 SER D 52 ASN D 81 1 30 HELIX 17 AB8 THR D 87 LEU D 99 1 13 HELIX 18 AB9 GLY D 101 SER D 120 1 20 HELIX 19 AC1 GLY E 44 SER E 57 1 14 HELIX 20 AC2 ARG E 63 ASP E 77 1 15 HELIX 21 AC3 GLN E 85 ALA E 114 1 30 HELIX 22 AC4 MET E 120 GLY E 132 1 13 HELIX 23 AC5 THR F 30 GLY F 42 1 13 HELIX 24 AC6 LEU F 49 ALA F 76 1 28 HELIX 25 AC7 THR F 82 GLN F 93 1 12 HELIX 26 AC8 THR G 16 ALA G 21 1 6 HELIX 27 AC9 PRO G 26 GLY G 37 1 12 HELIX 28 AD1 ALA G 45 ASN G 73 1 29 HELIX 29 AD2 ILE G 79 ASP G 90 1 12 HELIX 30 AD3 GLU G 91 LEU G 97 1 7 HELIX 31 AD4 TYR H 34 HIS H 46 1 13 HELIX 32 AD5 SER H 52 ASN H 81 1 30 HELIX 33 AD6 THR H 87 LEU H 99 1 13 HELIX 34 AD7 PRO H 100 ALA H 121 1 22 HELIX 35 AD8 THR L 22 GLY L 35 1 14 HELIX 36 AD9 ASP K 32 GLU K 46 1 15 HELIX 37 AE1 LEU K 51 GLU K 56 1 6 HELIX 38 AE2 SER K 67 LYS K 90 1 24 HELIX 39 AE3 SER K 103 VAL K 119 1 17 HELIX 40 AE4 ASP K 121 ASN K 127 1 7 HELIX 41 AE5 SER K 140 ILE K 151 1 12 HELIX 42 AE6 GLY K 167 THR K 177 1 11 HELIX 43 AE7 ALA K 188 TYR K 209 1 22 HELIX 44 AE8 SER K 225 THR K 235 1 11 HELIX 45 AE9 ASN K 241 PHE K 245 5 5 HELIX 46 AF1 GLY K 246 ALA K 258 1 13 HELIX 47 AF2 SER K 281 SER K 285 5 5 HELIX 48 AF3 ILE K 287 THR K 289 5 3 HELIX 49 AF4 ARG K 319 ASN K 331 1 13 SHEET 1 AA1 2 ARG A 83 PHE A 84 0 SHEET 2 AA1 2 THR B 80 VAL B 81 1 O VAL B 81 N ARG A 83 SHEET 1 AA2 2 THR A 118 ILE A 119 0 SHEET 2 AA2 2 ARG B 45 ILE B 46 1 O ARG B 45 N ILE A 119 SHEET 1 AA3 2 THR B 96 LEU B 97 0 SHEET 2 AA3 2 VAL G 100 THR G 101 1 O THR G 101 N THR B 96 SHEET 1 AA4 2 ARG C 42 VAL C 43 0 SHEET 2 AA4 2 THR D 85 ILE D 86 1 O ILE D 86 N ARG C 42 SHEET 1 AA5 2 ARG C 77 ILE C 78 0 SHEET 2 AA5 2 GLY D 50 ILE D 51 1 O GLY D 50 N ILE C 78 SHEET 1 AA6 2 THR E 118 ILE E 119 0 SHEET 2 AA6 2 ARG F 45 ILE F 46 1 O ARG F 45 N ILE E 119 SHEET 1 AA7 2 ARG G 42 VAL G 43 0 SHEET 2 AA7 2 THR H 85 ILE H 86 1 O ILE H 86 N ARG G 42 SHEET 1 AA8 2 ARG G 77 ILE G 78 0 SHEET 2 AA8 2 GLY H 50 ILE H 51 1 O GLY H 50 N ILE G 78 SHEET 1 AA9 3 PHE L 4 LYS L 6 0 SHEET 2 AA9 3 THR L 66 LEU L 71 1 O LEU L 67 N LYS L 6 SHEET 3 AA9 3 GLN L 41 LEU L 43 -1 N ARG L 42 O VAL L 70 SHEET 1 AB1 7 THR K 217 LEU K 218 0 SHEET 2 AB1 7 HIS K 182 VAL K 185 1 N HIS K 182 O THR K 217 SHEET 3 AB1 7 PHE K 159 LEU K 162 1 N PHE K 159 O TYR K 183 SHEET 4 AB1 7 VAL K 237 VAL K 240 1 O PHE K 239 N VAL K 160 SHEET 5 AB1 7 ILE K 266 SER K 268 1 O VAL K 267 N ILE K 238 SHEET 6 AB1 7 TYR K 313 ILE K 317 -1 O HIS K 315 N ILE K 266 SHEET 7 AB1 7 MET K 291 GLU K 295 -1 N ARG K 292 O THR K 316 LINK CE1 PHE K 223 N6 SAH K 501 1555 1555 1.43 CISPEP 1 LYS B 16 ARG B 17 0 -4.97 CISPEP 2 TRP K 22 PRO K 23 0 3.94 CISPEP 3 LEU K 299 LYS K 300 0 -8.00 SITE 1 AC1 19 PRO K 133 VAL K 135 GLY K 137 GLU K 138 SITE 2 AC1 19 GLY K 163 SER K 164 GLY K 165 GLN K 168 SITE 3 AC1 19 VAL K 185 GLU K 186 LYS K 187 ALA K 188 SITE 4 AC1 19 GLY K 221 ASP K 222 LEU K 224 SER K 225 SITE 5 AC1 19 TRP K 228 VAL K 249 ARG K 256 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003846 0.000000 0.000000 0.00000 SCALE2 0.000000 0.003846 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003846 0.00000