PDB Short entry for 6MFQ HEADER HYDROLASE 11-SEP-18 6MFQ TITLE CRYSTAL STRUCTURE OF A PMS2 VARIANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: MISMATCH REPAIR ENDONUCLEASE PMS2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DNA MISMATCH REPAIR PROTEIN PMS2,PMS1 PROTEIN HOMOLOG 2; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 VARIANT: G207E; SOURCE 6 GENE: PMS2, PMSL2; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA2 (DE3 PLYSS) KEYWDS MISMATCH REPAIR, VARIANT OF UNCERTAIN SIGNIFICANCE, ATPASE DOMAIN, KEYWDS 2 HYDROLASE, DNA REPAIR ENZYME EXPDTA X-RAY DIFFRACTION AUTHOR B.M.D'ARCY,A.PRAKASH REVDAT 4 11-OCT-23 6MFQ 1 REMARK REVDAT 3 18-DEC-19 6MFQ 1 REMARK REVDAT 2 20-MAR-19 6MFQ 1 JRNL REVDAT 1 06-FEB-19 6MFQ 0 JRNL AUTH B.M.D'ARCY,J.BLOUNT,A.PRAKASH JRNL TITL BIOCHEMICAL AND STRUCTURAL CHARACTERIZATION OF TWO VARIANTS JRNL TITL 2 OF UNCERTAIN SIGNIFICANCE IN THE PMS2 GENE. JRNL REF HUM. MUTAT. V. 40 458 2019 JRNL REFN ESSN 1098-1004 JRNL PMID 30653781 JRNL DOI 10.1002/HUMU.23708 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 19.680 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23938 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.410 REMARK 3 FREE R VALUE TEST SET COUNT : 2013 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.4633 - 6.2596 0.91 1681 160 0.1827 0.2311 REMARK 3 2 6.2596 - 4.9719 0.91 1611 149 0.1952 0.2136 REMARK 3 3 4.9719 - 4.3444 0.92 1608 144 0.1793 0.1684 REMARK 3 4 4.3444 - 3.9476 0.91 1539 142 0.1967 0.1977 REMARK 3 5 3.9476 - 3.6649 0.91 1579 145 0.2389 0.2450 REMARK 3 6 3.6649 - 3.4489 0.92 1564 141 0.2383 0.2735 REMARK 3 7 3.4489 - 3.2763 0.91 1530 144 0.2551 0.2693 REMARK 3 8 3.2763 - 3.1338 0.92 1550 141 0.2706 0.2728 REMARK 3 9 3.1338 - 3.0132 0.92 1547 142 0.2715 0.2841 REMARK 3 10 3.0132 - 2.9092 0.91 1543 144 0.2882 0.2547 REMARK 3 11 2.9092 - 2.8183 0.92 1555 141 0.3107 0.3401 REMARK 3 12 2.8183 - 2.7378 0.91 1553 138 0.3461 0.3207 REMARK 3 13 2.7378 - 2.6657 0.91 1524 141 0.3310 0.3419 REMARK 3 14 2.6657 - 2.6007 0.91 1530 139 0.3389 0.3342 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.4700 REMARK 3 OPERATOR: K,H,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4554 REMARK 3 ANGLE : 0.496 6192 REMARK 3 CHIRALITY : 0.042 738 REMARK 3 PLANARITY : 0.003 806 REMARK 3 DIHEDRAL : 5.337 2735 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 33 THROUGH 79 OR REMARK 3 (RESID 80 THROUGH 81 AND (NAME N OR NAME REMARK 3 CA OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 82 THROUGH 159 OR (RESID 160 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 161 THROUGH 211 OR REMARK 3 (RESID 212 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 213 REMARK 3 THROUGH 262 OR (RESID 263 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 264 THROUGH 285 OR (RESID 286 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 287 THROUGH 333 REMARK 3 OR RESID 342 THROUGH 365)) REMARK 3 SELECTION : (CHAIN B AND (RESID 33 THROUGH 44 OR REMARK 3 (RESID 45 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 46 REMARK 3 THROUGH 53 OR (RESID 54 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 55 THROUGH 84 OR (RESID 85 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 109 THROUGH 127 OR REMARK 3 (RESID 128 THROUGH 130 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 131 THROUGH 171 OR (RESID 172 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 173 THROUGH 177 REMARK 3 OR (RESID 178 THROUGH 179 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 180 THROUGH 182 OR (RESID 183 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 184 THROUGH 204 REMARK 3 OR (RESID 205 THROUGH 208 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 209 THROUGH 277 OR (RESID 278 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 279 THROUGH 300 REMARK 3 OR (RESID 301 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 302 THROUGH 328 OR (RESID 329 THROUGH 330 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 331 OR (RESID REMARK 3 332 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 333 THROUGH REMARK 3 342 OR (RESID 343 THROUGH 344 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 345 THROUGH 348 OR (RESID 349 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 350 THROUGH 365)) REMARK 3 ATOM PAIRS NUMBER : 2664 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MFQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1000236838. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT V8.37A REMARK 200 DATA SCALING SOFTWARE : SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23960 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 38.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.80 REMARK 200 R MERGE (I) : 0.18200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.10 REMARK 200 R MERGE FOR SHELL (I) : 1.56700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.16 REMARK 200 STARTING MODEL: 1H7S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE OBTAINED IN CONDITIONS REMARK 280 CONTAINING 4% TACSIMATE PH 5 (V/V) AND 25% PEG 3350 (W/V). THE REMARK 280 CONCENTRATED PMS2 G207E PROTEIN (7 MG/ML) WAS COMBINED WITH REMARK 280 0.1UL OF AN ADDITIVE (0.1 M CALCIUM CHLORIDE DEHYDRATE) PRIOR TO REMARK 280 THE ADDITION OF CRYSTALLIZATION REAGENT IN A 1:1 RATIO., VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.49450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.19950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.48100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.19950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.49450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.48100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ARG A 3 REMARK 465 ALA A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 THR A 9 REMARK 465 GLU A 10 REMARK 465 PRO A 11 REMARK 465 ALA A 12 REMARK 465 LYS A 13 REMARK 465 ALA A 14 REMARK 465 ILE A 15 REMARK 465 LYS A 16 REMARK 465 PRO A 17 REMARK 465 ILE A 18 REMARK 465 ASP A 19 REMARK 465 ARG A 20 REMARK 465 LYS A 21 REMARK 465 SER A 22 REMARK 465 VAL A 23 REMARK 465 HIS A 24 REMARK 465 GLN A 25 REMARK 465 ILE A 26 REMARK 465 CYS A 27 REMARK 465 SER A 28 REMARK 465 GLY A 29 REMARK 465 GLN A 30 REMARK 465 VAL A 31 REMARK 465 VAL A 32 REMARK 465 LYS A 86 REMARK 465 HIS A 87 REMARK 465 HIS A 88 REMARK 465 THR A 89 REMARK 465 SER A 90 REMARK 465 LYS A 91 REMARK 465 ILE A 92 REMARK 465 GLN A 93 REMARK 465 GLU A 94 REMARK 465 PHE A 95 REMARK 465 ALA A 96 REMARK 465 ASP A 97 REMARK 465 LEU A 98 REMARK 465 THR A 99 REMARK 465 GLN A 100 REMARK 465 VAL A 101 REMARK 465 GLU A 102 REMARK 465 THR A 103 REMARK 465 PHE A 104 REMARK 465 GLY A 105 REMARK 465 PHE A 106 REMARK 465 ARG A 107 REMARK 465 GLY A 108 REMARK 465 ASN A 335 REMARK 465 VAL A 336 REMARK 465 THR A 337 REMARK 465 PRO A 338 REMARK 465 ASP A 339 REMARK 465 LYS A 340 REMARK 465 ARG A 341 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ARG B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 THR B 9 REMARK 465 GLU B 10 REMARK 465 PRO B 11 REMARK 465 ALA B 12 REMARK 465 LYS B 13 REMARK 465 ALA B 14 REMARK 465 ILE B 15 REMARK 465 LYS B 16 REMARK 465 PRO B 17 REMARK 465 ILE B 18 REMARK 465 ASP B 19 REMARK 465 ARG B 20 REMARK 465 LYS B 21 REMARK 465 SER B 22 REMARK 465 VAL B 23 REMARK 465 HIS B 24 REMARK 465 GLN B 25 REMARK 465 ILE B 26 REMARK 465 CYS B 27 REMARK 465 SER B 28 REMARK 465 GLY B 29 REMARK 465 GLN B 30 REMARK 465 VAL B 31 REMARK 465 VAL B 32 REMARK 465 LYS B 86 REMARK 465 HIS B 87 REMARK 465 HIS B 88 REMARK 465 THR B 89 REMARK 465 SER B 90 REMARK 465 LYS B 91 REMARK 465 ILE B 92 REMARK 465 GLN B 93 REMARK 465 GLU B 94 REMARK 465 PHE B 95 REMARK 465 ALA B 96 REMARK 465 ASP B 97 REMARK 465 LEU B 98 REMARK 465 THR B 99 REMARK 465 GLN B 100 REMARK 465 VAL B 101 REMARK 465 GLU B 102 REMARK 465 THR B 103 REMARK 465 PHE B 104 REMARK 465 GLY B 105 REMARK 465 PHE B 106 REMARK 465 ARG B 107 REMARK 465 GLY B 108 REMARK 465 ILE B 334 REMARK 465 ASN B 335 REMARK 465 VAL B 336 REMARK 465 THR B 337 REMARK 465 PRO B 338 REMARK 465 ASP B 339 REMARK 465 LYS B 340 REMARK 465 ARG B 341 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 33 CG CD1 CD2 REMARK 470 ASN A 45 CG OD1 ND2 REMARK 470 ILE A 54 CG1 CG2 CD1 REMARK 470 GLU A 76 CG CD OE1 OE2 REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 GLU A 81 CG CD OE1 OE2 REMARK 470 LEU A 83 CG CD1 CD2 REMARK 470 LEU A 85 CG CD1 CD2 REMARK 470 LEU A 111 CG CD1 CD2 REMARK 470 SER A 128 OG REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 LYS A 142 CG CD CE NZ REMARK 470 LYS A 146 CG CD CE NZ REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 LYS A 178 CG CD CE NZ REMARK 470 LYS A 179 CG CD CE NZ REMARK 470 LYS A 183 CG CD CE NZ REMARK 470 GLN A 205 CG CD OE1 NE2 REMARK 470 LEU A 206 CG CD1 CD2 REMARK 470 GLU A 207 CG CD OE1 OE2 REMARK 470 GLN A 208 CG CD OE1 NE2 REMARK 470 LYS A 210 CG CD CE NZ REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 HIS A 278 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 295 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 301 CG CD CE NZ REMARK 470 ARG A 315 CG CD NE CZ NH1 NH2 REMARK 470 SER A 329 OG REMARK 470 GLU A 330 CG CD OE1 OE2 REMARK 470 VAL A 332 CG1 CG2 REMARK 470 GLN A 342 CG CD OE1 NE2 REMARK 470 ILE A 343 CG1 CG2 CD1 REMARK 470 LEU A 344 CG CD1 CD2 REMARK 470 LYS A 349 CG CD CE NZ REMARK 470 SER A 365 OG REMARK 470 LEU B 33 CG CD1 CD2 REMARK 470 GLU B 76 CG CD OE1 OE2 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 GLU B 78 CG CD OE1 OE2 REMARK 470 PHE B 80 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 81 CG CD OE1 OE2 REMARK 470 LEU B 83 CG CD1 CD2 REMARK 470 LEU B 111 CG CD1 CD2 REMARK 470 LYS B 130 CG CD CE NZ REMARK 470 LYS B 142 CG CD CE NZ REMARK 470 LYS B 146 CG CD CE NZ REMARK 470 GLN B 160 CG CD OE1 NE2 REMARK 470 LEU B 206 CG CD1 CD2 REMARK 470 GLU B 207 CG CD OE1 OE2 REMARK 470 GLN B 208 CG CD OE1 NE2 REMARK 470 LYS B 210 CG CD CE NZ REMARK 470 GLN B 212 CG CD OE1 NE2 REMARK 470 LYS B 234 CG CD CE NZ REMARK 470 LEU B 263 CG CD1 CD2 REMARK 470 ASP B 286 CG OD1 OD2 REMARK 470 ARG B 295 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 315 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 342 CG CD OE1 NE2 REMARK 470 SER B 365 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 61 14.06 58.23 REMARK 500 ASN A 71 36.99 -99.89 REMARK 500 GLN A 161 75.76 48.54 REMARK 500 GLU A 207 -125.22 48.99 REMARK 500 THR A 285 35.68 -96.54 REMARK 500 TYR B 61 14.75 58.69 REMARK 500 ASN B 71 37.16 -99.81 REMARK 500 GLN B 161 76.59 49.16 REMARK 500 GLU B 207 -124.80 51.13 REMARK 500 THR B 285 36.15 -96.40 REMARK 500 REMARK 500 REMARK: NULL DBREF 6MFQ A 1 365 UNP P54278 PMS2_HUMAN 1 365 DBREF 6MFQ B 1 365 UNP P54278 PMS2_HUMAN 1 365 SEQADV 6MFQ GLY A -3 UNP P54278 EXPRESSION TAG SEQADV 6MFQ SER A -2 UNP P54278 EXPRESSION TAG SEQADV 6MFQ HIS A -1 UNP P54278 EXPRESSION TAG SEQADV 6MFQ MET A 0 UNP P54278 EXPRESSION TAG SEQADV 6MFQ GLU A 207 UNP P54278 GLY 207 VARIANT SEQADV 6MFQ GLY B -3 UNP P54278 EXPRESSION TAG SEQADV 6MFQ SER B -2 UNP P54278 EXPRESSION TAG SEQADV 6MFQ HIS B -1 UNP P54278 EXPRESSION TAG SEQADV 6MFQ MET B 0 UNP P54278 EXPRESSION TAG SEQADV 6MFQ GLU B 207 UNP P54278 GLY 207 VARIANT SEQRES 1 A 369 GLY SER HIS MET MET GLU ARG ALA GLU SER SER SER THR SEQRES 2 A 369 GLU PRO ALA LYS ALA ILE LYS PRO ILE ASP ARG LYS SER SEQRES 3 A 369 VAL HIS GLN ILE CYS SER GLY GLN VAL VAL LEU SER LEU SEQRES 4 A 369 SER THR ALA VAL LYS GLU LEU VAL GLU ASN SER LEU ASP SEQRES 5 A 369 ALA GLY ALA THR ASN ILE ASP LEU LYS LEU LYS ASP TYR SEQRES 6 A 369 GLY VAL ASP LEU ILE GLU VAL SER ASP ASN GLY CYS GLY SEQRES 7 A 369 VAL GLU GLU GLU ASN PHE GLU GLY LEU THR LEU LYS HIS SEQRES 8 A 369 HIS THR SER LYS ILE GLN GLU PHE ALA ASP LEU THR GLN SEQRES 9 A 369 VAL GLU THR PHE GLY PHE ARG GLY GLU ALA LEU SER SER SEQRES 10 A 369 LEU CYS ALA LEU SER ASP VAL THR ILE SER THR CYS HIS SEQRES 11 A 369 ALA SER ALA LYS VAL GLY THR ARG LEU MET PHE ASP HIS SEQRES 12 A 369 ASN GLY LYS ILE ILE GLN LYS THR PRO TYR PRO ARG PRO SEQRES 13 A 369 ARG GLY THR THR VAL SER VAL GLN GLN LEU PHE SER THR SEQRES 14 A 369 LEU PRO VAL ARG HIS LYS GLU PHE GLN ARG ASN ILE LYS SEQRES 15 A 369 LYS GLU TYR ALA LYS MET VAL GLN VAL LEU HIS ALA TYR SEQRES 16 A 369 CYS ILE ILE SER ALA GLY ILE ARG VAL SER CYS THR ASN SEQRES 17 A 369 GLN LEU GLU GLN GLY LYS ARG GLN PRO VAL VAL CYS THR SEQRES 18 A 369 GLY GLY SER PRO SER ILE LYS GLU ASN ILE GLY SER VAL SEQRES 19 A 369 PHE GLY GLN LYS GLN LEU GLN SER LEU ILE PRO PHE VAL SEQRES 20 A 369 GLN LEU PRO PRO SER ASP SER VAL CYS GLU GLU TYR GLY SEQRES 21 A 369 LEU SER CYS SER ASP ALA LEU HIS ASN LEU PHE TYR ILE SEQRES 22 A 369 SER GLY PHE ILE SER GLN CYS THR HIS GLY VAL GLY ARG SEQRES 23 A 369 SER SER THR ASP ARG GLN PHE PHE PHE ILE ASN ARG ARG SEQRES 24 A 369 PRO CYS ASP PRO ALA LYS VAL CYS ARG LEU VAL ASN GLU SEQRES 25 A 369 VAL TYR HIS MET TYR ASN ARG HIS GLN TYR PRO PHE VAL SEQRES 26 A 369 VAL LEU ASN ILE SER VAL ASP SER GLU CYS VAL ASP ILE SEQRES 27 A 369 ASN VAL THR PRO ASP LYS ARG GLN ILE LEU LEU GLN GLU SEQRES 28 A 369 GLU LYS LEU LEU LEU ALA VAL LEU LYS THR SER LEU ILE SEQRES 29 A 369 GLY MET PHE ASP SER SEQRES 1 B 369 GLY SER HIS MET MET GLU ARG ALA GLU SER SER SER THR SEQRES 2 B 369 GLU PRO ALA LYS ALA ILE LYS PRO ILE ASP ARG LYS SER SEQRES 3 B 369 VAL HIS GLN ILE CYS SER GLY GLN VAL VAL LEU SER LEU SEQRES 4 B 369 SER THR ALA VAL LYS GLU LEU VAL GLU ASN SER LEU ASP SEQRES 5 B 369 ALA GLY ALA THR ASN ILE ASP LEU LYS LEU LYS ASP TYR SEQRES 6 B 369 GLY VAL ASP LEU ILE GLU VAL SER ASP ASN GLY CYS GLY SEQRES 7 B 369 VAL GLU GLU GLU ASN PHE GLU GLY LEU THR LEU LYS HIS SEQRES 8 B 369 HIS THR SER LYS ILE GLN GLU PHE ALA ASP LEU THR GLN SEQRES 9 B 369 VAL GLU THR PHE GLY PHE ARG GLY GLU ALA LEU SER SER SEQRES 10 B 369 LEU CYS ALA LEU SER ASP VAL THR ILE SER THR CYS HIS SEQRES 11 B 369 ALA SER ALA LYS VAL GLY THR ARG LEU MET PHE ASP HIS SEQRES 12 B 369 ASN GLY LYS ILE ILE GLN LYS THR PRO TYR PRO ARG PRO SEQRES 13 B 369 ARG GLY THR THR VAL SER VAL GLN GLN LEU PHE SER THR SEQRES 14 B 369 LEU PRO VAL ARG HIS LYS GLU PHE GLN ARG ASN ILE LYS SEQRES 15 B 369 LYS GLU TYR ALA LYS MET VAL GLN VAL LEU HIS ALA TYR SEQRES 16 B 369 CYS ILE ILE SER ALA GLY ILE ARG VAL SER CYS THR ASN SEQRES 17 B 369 GLN LEU GLU GLN GLY LYS ARG GLN PRO VAL VAL CYS THR SEQRES 18 B 369 GLY GLY SER PRO SER ILE LYS GLU ASN ILE GLY SER VAL SEQRES 19 B 369 PHE GLY GLN LYS GLN LEU GLN SER LEU ILE PRO PHE VAL SEQRES 20 B 369 GLN LEU PRO PRO SER ASP SER VAL CYS GLU GLU TYR GLY SEQRES 21 B 369 LEU SER CYS SER ASP ALA LEU HIS ASN LEU PHE TYR ILE SEQRES 22 B 369 SER GLY PHE ILE SER GLN CYS THR HIS GLY VAL GLY ARG SEQRES 23 B 369 SER SER THR ASP ARG GLN PHE PHE PHE ILE ASN ARG ARG SEQRES 24 B 369 PRO CYS ASP PRO ALA LYS VAL CYS ARG LEU VAL ASN GLU SEQRES 25 B 369 VAL TYR HIS MET TYR ASN ARG HIS GLN TYR PRO PHE VAL SEQRES 26 B 369 VAL LEU ASN ILE SER VAL ASP SER GLU CYS VAL ASP ILE SEQRES 27 B 369 ASN VAL THR PRO ASP LYS ARG GLN ILE LEU LEU GLN GLU SEQRES 28 B 369 GLU LYS LEU LEU LEU ALA VAL LEU LYS THR SER LEU ILE SEQRES 29 B 369 GLY MET PHE ASP SER FORMUL 3 HOH *33(H2 O) HELIX 1 AA1 SER A 34 ALA A 49 1 16 HELIX 2 AA2 GLU A 76 LEU A 85 5 10 HELIX 3 AA3 ALA A 110 SER A 118 1 9 HELIX 4 AA4 LEU A 166 ASN A 176 1 11 HELIX 5 AA5 ASN A 176 SER A 195 1 20 HELIX 6 AA6 SER A 222 GLY A 232 1 11 HELIX 7 AA7 GLY A 232 SER A 238 1 7 HELIX 8 AA8 SER A 248 GLY A 256 1 9 HELIX 9 AA9 SER A 258 HIS A 264 1 7 HELIX 10 AB1 PRO A 299 MET A 312 1 14 HELIX 11 AB2 ASP A 328 GLU A 330 5 3 HELIX 12 AB3 GLU A 347 ASP A 364 1 18 HELIX 13 AB4 SER B 34 ALA B 49 1 16 HELIX 14 AB5 GLU B 76 LEU B 85 5 10 HELIX 15 AB6 ALA B 110 SER B 118 1 9 HELIX 16 AB7 LEU B 166 ASN B 176 1 11 HELIX 17 AB8 ASN B 176 SER B 195 1 20 HELIX 18 AB9 SER B 222 GLY B 232 1 11 HELIX 19 AC1 GLY B 232 SER B 238 1 7 HELIX 20 AC2 SER B 248 GLY B 256 1 9 HELIX 21 AC3 SER B 258 HIS B 264 1 7 HELIX 22 AC4 PRO B 299 MET B 312 1 14 HELIX 23 AC5 ASP B 328 GLU B 330 5 3 HELIX 24 AC6 GLU B 347 ASP B 364 1 18 SHEET 1 AA1 8 ILE A 143 PRO A 148 0 SHEET 2 AA1 8 THR A 133 PHE A 137 -1 N ARG A 134 O THR A 147 SHEET 3 AA1 8 ASP A 119 CYS A 125 -1 N ILE A 122 O LEU A 135 SHEET 4 AA1 8 GLY A 154 GLN A 160 -1 O SER A 158 N THR A 121 SHEET 5 AA1 8 LEU A 65 ASP A 70 -1 N VAL A 68 O VAL A 157 SHEET 6 AA1 8 ASN A 53 LYS A 59 -1 N ASP A 55 O SER A 69 SHEET 7 AA1 8 ARG A 199 GLN A 205 1 O ARG A 199 N ILE A 54 SHEET 8 AA1 8 GLN A 212 CYS A 216 -1 O VAL A 214 N CYS A 202 SHEET 1 AA2 5 LEU A 239 PRO A 241 0 SHEET 2 AA2 5 TYR A 268 SER A 274 -1 O ILE A 273 N ILE A 240 SHEET 3 AA2 5 VAL A 321 SER A 326 -1 O SER A 326 N TYR A 268 SHEET 4 AA2 5 GLN A 288 ILE A 292 1 N PHE A 291 O LEU A 323 SHEET 5 AA2 5 ARG A 295 CYS A 297 -1 O CYS A 297 N PHE A 290 SHEET 1 AA3 2 VAL A 332 ASP A 333 0 SHEET 2 AA3 2 LEU A 344 LEU A 345 -1 O LEU A 344 N ASP A 333 SHEET 1 AA4 8 ILE B 143 TYR B 149 0 SHEET 2 AA4 8 GLY B 132 PHE B 137 -1 N ARG B 134 O THR B 147 SHEET 3 AA4 8 ASP B 119 CYS B 125 -1 N ILE B 122 O LEU B 135 SHEET 4 AA4 8 GLY B 154 GLN B 160 -1 O SER B 158 N THR B 121 SHEET 5 AA4 8 LEU B 65 ASP B 70 -1 N VAL B 68 O VAL B 157 SHEET 6 AA4 8 ASN B 53 LYS B 59 -1 N ASP B 55 O SER B 69 SHEET 7 AA4 8 ARG B 199 GLN B 205 1 O ARG B 199 N ILE B 54 SHEET 8 AA4 8 GLN B 212 CYS B 216 -1 O GLN B 212 N ASN B 204 SHEET 1 AA5 5 LEU B 239 PRO B 241 0 SHEET 2 AA5 5 TYR B 268 SER B 274 -1 O ILE B 273 N ILE B 240 SHEET 3 AA5 5 VAL B 321 SER B 326 -1 O SER B 326 N TYR B 268 SHEET 4 AA5 5 GLN B 288 ILE B 292 1 N PHE B 289 O LEU B 323 SHEET 5 AA5 5 ARG B 295 CYS B 297 -1 O CYS B 297 N PHE B 290 SHEET 1 AA6 2 VAL B 332 ASP B 333 0 SHEET 2 AA6 2 LEU B 344 LEU B 345 -1 O LEU B 344 N ASP B 333 CRYST1 74.989 74.962 134.399 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013335 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007441 0.00000