PDB Short entry for 6OZE HEADER HYDROLASE 15-MAY-19 6OZE TITLE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN ENDONUCLEASE V TITLE 2 (C140S/C225S/C226A/C228S) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDONUCLEASE V; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HENDOV,INOSINE-SPECIFIC ENDORIBONUCLEASE; COMPND 5 EC: 3.1.26.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ENDOV; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEIC ACID HYDROLYSIS, RNA RECOGNITION, METAL ION DEPENDENT KEYWDS 2 CATALYSIS, DNA DAMAGE, ADENOSINE DEAMINATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.L.SAMARA,W.YANG REVDAT 3 11-OCT-23 6OZE 1 LINK REVDAT 2 16-OCT-19 6OZE 1 JRNL REVDAT 1 04-SEP-19 6OZE 0 JRNL AUTH J.WU,N.L.SAMARA,I.KURAOKA,W.YANG JRNL TITL EVOLUTION OF INOSINE-SPECIFIC ENDONUCLEASE V FROM BACTERIAL JRNL TITL 2 DNASE TO EUKARYOTIC RNASE. JRNL REF MOL.CELL V. 76 44 2019 JRNL REFN ISSN 1097-2765 JRNL PMID 31444105 JRNL DOI 10.1016/J.MOLCEL.2019.06.046 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 47020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 2240 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.7324 - 3.7730 0.87 2481 122 0.1606 0.1791 REMARK 3 2 3.7730 - 2.9964 1.00 2812 147 0.1474 0.1570 REMARK 3 3 2.9964 - 2.6181 1.00 2895 140 0.1829 0.2128 REMARK 3 4 2.6181 - 2.3790 1.00 2868 116 0.1676 0.2017 REMARK 3 5 2.3790 - 2.2086 1.00 2825 144 0.1627 0.1697 REMARK 3 6 2.2086 - 2.0784 1.00 2864 169 0.1561 0.1625 REMARK 3 7 2.0784 - 1.9744 1.00 2811 178 0.1646 0.1990 REMARK 3 8 1.9744 - 1.8885 1.00 2829 133 0.1771 0.2086 REMARK 3 9 1.8885 - 1.8158 1.00 2852 148 0.1932 0.2421 REMARK 3 10 1.8158 - 1.7531 1.00 2844 145 0.2026 0.2327 REMARK 3 11 1.7531 - 1.6983 1.00 2826 138 0.2026 0.2176 REMARK 3 12 1.6983 - 1.6498 1.00 2895 158 0.2168 0.2516 REMARK 3 13 1.6498 - 1.6064 1.00 2795 188 0.2317 0.2353 REMARK 3 14 1.6064 - 1.5672 1.00 2901 88 0.2520 0.2560 REMARK 3 15 1.5672 - 1.5316 0.96 2767 110 0.2546 0.2641 REMARK 3 16 1.5316 - 1.4990 0.89 2515 116 0.2822 0.2958 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2088 REMARK 3 ANGLE : 0.823 2853 REMARK 3 CHIRALITY : 0.079 328 REMARK 3 PLANARITY : 0.005 375 REMARK 3 DIHEDRAL : 21.283 822 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6032 3.2293 11.1857 REMARK 3 T TENSOR REMARK 3 T11: 0.5312 T22: 0.2489 REMARK 3 T33: 0.3380 T12: 0.0678 REMARK 3 T13: -0.0044 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 3.7143 L22: 3.2092 REMARK 3 L33: 3.4534 L12: -1.7459 REMARK 3 L13: -3.6058 L23: 1.7027 REMARK 3 S TENSOR REMARK 3 S11: -0.0237 S12: -0.3345 S13: 0.6377 REMARK 3 S21: 0.1528 S22: 0.2565 S23: 0.3850 REMARK 3 S31: -0.7966 S32: -0.1087 S33: -0.3020 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1869 -17.2432 -0.5097 REMARK 3 T TENSOR REMARK 3 T11: 0.1685 T22: 0.1279 REMARK 3 T33: 0.1379 T12: 0.0241 REMARK 3 T13: -0.0164 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.8420 L22: 2.2703 REMARK 3 L33: 6.2029 L12: 0.4379 REMARK 3 L13: -1.5984 L23: 0.2151 REMARK 3 S TENSOR REMARK 3 S11: 0.1079 S12: 0.1768 S13: 0.1029 REMARK 3 S21: -0.0271 S22: 0.1529 S23: -0.1016 REMARK 3 S31: -0.2045 S32: 0.1361 S33: -0.2661 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3164 -18.7383 6.7052 REMARK 3 T TENSOR REMARK 3 T11: 0.1392 T22: 0.1628 REMARK 3 T33: 0.1645 T12: -0.0159 REMARK 3 T13: -0.0345 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 1.1806 L22: 1.6419 REMARK 3 L33: 5.7619 L12: 0.2811 REMARK 3 L13: -0.6481 L23: -0.0692 REMARK 3 S TENSOR REMARK 3 S11: -0.1743 S12: -0.0783 S13: -0.0619 REMARK 3 S21: 0.3724 S22: 0.1269 S23: 0.1427 REMARK 3 S31: 0.3516 S32: -0.1539 S33: 0.1155 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6280 -12.4745 4.9739 REMARK 3 T TENSOR REMARK 3 T11: 0.2101 T22: 0.1273 REMARK 3 T33: 0.1721 T12: -0.0097 REMARK 3 T13: -0.0033 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 1.2697 L22: 3.5688 REMARK 3 L33: 5.8409 L12: -0.0512 REMARK 3 L13: -0.7175 L23: 2.3027 REMARK 3 S TENSOR REMARK 3 S11: 0.0215 S12: -0.1186 S13: -0.0029 REMARK 3 S21: 0.0832 S22: 0.1039 S23: 0.0436 REMARK 3 S31: -0.3437 S32: 0.1922 S33: -0.0959 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7804 -9.3223 -14.9825 REMARK 3 T TENSOR REMARK 3 T11: 0.3062 T22: 0.2469 REMARK 3 T33: 0.1624 T12: 0.0997 REMARK 3 T13: 0.0092 T23: 0.0303 REMARK 3 L TENSOR REMARK 3 L11: 5.3003 L22: 3.1292 REMARK 3 L33: 6.0336 L12: -1.0890 REMARK 3 L13: 1.1258 L23: -0.4176 REMARK 3 S TENSOR REMARK 3 S11: 0.0741 S12: -0.1100 S13: 0.1928 REMARK 3 S21: 0.1064 S22: -0.0660 S23: 0.1364 REMARK 3 S31: -0.3674 S32: -0.3604 S33: 0.0011 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 207 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5112 -15.2744 -9.6360 REMARK 3 T TENSOR REMARK 3 T11: 0.2247 T22: 0.1543 REMARK 3 T33: 0.0952 T12: 0.0133 REMARK 3 T13: 0.0055 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 5.1759 L22: 3.3429 REMARK 3 L33: 5.6534 L12: 1.0834 REMARK 3 L13: 1.0594 L23: 1.0283 REMARK 3 S TENSOR REMARK 3 S11: -0.0632 S12: 0.1451 S13: -0.0425 REMARK 3 S21: -0.3422 S22: 0.1284 S23: -0.0541 REMARK 3 S31: -0.2388 S32: 0.1173 S33: -0.0883 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 234 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.9542 -26.9778 5.0061 REMARK 3 T TENSOR REMARK 3 T11: 0.2874 T22: 0.2051 REMARK 3 T33: 0.1814 T12: -0.0415 REMARK 3 T13: -0.0187 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 8.7274 L22: 4.8842 REMARK 3 L33: 5.2134 L12: 4.1686 REMARK 3 L13: -6.4692 L23: -4.1105 REMARK 3 S TENSOR REMARK 3 S11: -0.1500 S12: 0.1663 S13: -0.1721 REMARK 3 S21: -0.0418 S22: 0.1276 S23: 0.0836 REMARK 3 S31: 0.5018 S32: -0.4903 S33: 0.0072 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6OZE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000241564. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47096 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 24.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 1.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.3 REMARK 200 DATA REDUNDANCY IN SHELL : 1.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2W35 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.6 M SODIUM ACETATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.32600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 68.65200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 240 O HOH A 401 1.96 REMARK 500 OD2 ASP A 126 O HOH A 401 2.09 REMARK 500 OD1 ASP A 52 O HOH A 401 2.10 REMARK 500 O HOH A 411 O HOH A 415 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 136 72.44 -152.94 REMARK 500 PHE A 230 -167.56 -112.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 306 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 45 O REMARK 620 2 GLN A 46 OE1 91.8 REMARK 620 3 PHE A 72 O 84.3 89.3 REMARK 620 4 HOH A 449 O 98.1 90.9 177.6 REMARK 620 5 HOH A 487 O 81.4 156.8 111.9 68.3 REMARK 620 6 HOH A 507 O 163.7 76.1 84.7 93.0 114.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 305 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 174 O REMARK 620 2 LEU A 176 O 93.5 REMARK 620 3 GLN A 177 OE1 102.2 77.9 REMARK 620 4 HOH A 462 O 83.2 78.6 156.2 REMARK 620 5 HOH A 470 O 165.5 95.6 90.8 87.5 REMARK 620 6 HOH A 521 O 85.6 177.6 100.2 103.4 85.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 306 DBREF 6OZE A 9 254 UNP Q8N8Q3 ENDOV_HUMAN 9 254 SEQADV 6OZE ALA A 57 UNP Q8N8Q3 LYS 57 CONFLICT SEQADV 6OZE SER A 140 UNP Q8N8Q3 CYS 140 ENGINEERED MUTATION SEQADV 6OZE ALA A 164 UNP Q8N8Q3 GLU 164 CONFLICT SEQADV 6OZE SER A 225 UNP Q8N8Q3 CYS 225 ENGINEERED MUTATION SEQADV 6OZE ALA A 226 UNP Q8N8Q3 CYS 226 ENGINEERED MUTATION SEQADV 6OZE SER A 228 UNP Q8N8Q3 CYS 228 ENGINEERED MUTATION SEQRES 1 A 246 PRO PRO GLU GLU THR LEU SER LEU TRP LYS ARG GLU GLN SEQRES 2 A 246 ALA ARG LEU LYS ALA HIS VAL VAL ASP ARG ASP THR GLU SEQRES 3 A 246 ALA TRP GLN ARG ASP PRO ALA PHE SER GLY LEU GLN ARG SEQRES 4 A 246 VAL GLY GLY VAL ASP VAL SER PHE VAL ALA GLY ASP SER SEQRES 5 A 246 VAL ARG ALA CYS ALA SER LEU VAL VAL LEU SER PHE PRO SEQRES 6 A 246 GLU LEU GLU VAL VAL TYR GLU GLU SER ARG MET VAL SER SEQRES 7 A 246 LEU THR ALA PRO TYR VAL SER GLY PHE LEU ALA PHE ARG SEQRES 8 A 246 GLU VAL PRO PHE LEU LEU GLU LEU VAL GLN GLN LEU ARG SEQRES 9 A 246 GLU LYS GLU PRO GLY LEU MET PRO GLN VAL LEU LEU VAL SEQRES 10 A 246 ASP GLY ASN GLY VAL LEU HIS HIS ARG GLY PHE GLY VAL SEQRES 11 A 246 ALA SER HIS LEU GLY VAL LEU THR ASP LEU PRO CYS VAL SEQRES 12 A 246 GLY VAL ALA LYS LYS LEU LEU GLN VAL ASP GLY LEU ALA SEQRES 13 A 246 ASN ASN ALA LEU HIS LYS GLU LYS ILE ARG LEU LEU GLN SEQRES 14 A 246 THR ARG GLY ASP SER PHE PRO LEU LEU GLY ASP SER GLY SEQRES 15 A 246 THR VAL LEU GLY MET ALA LEU ARG SER HIS ASP ARG SER SEQRES 16 A 246 THR ARG PRO LEU TYR ILE SER VAL GLY HIS ARG MET SER SEQRES 17 A 246 LEU GLU ALA ALA VAL ARG LEU THR SER ALA CYS SER ARG SEQRES 18 A 246 PHE ARG ILE PRO GLU PRO VAL ARG GLN ALA ASP ILE CYS SEQRES 19 A 246 SER ARG GLU HIS ILE ARG LYS SER LEU GLY LEU PRO HET ACT A 301 4 HET ACT A 302 4 HET GOL A 303 6 HET GOL A 304 6 HET NA A 305 1 HET NA A 306 1 HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ACT 2(C2 H3 O2 1-) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 NA 2(NA 1+) FORMUL 8 HOH *146(H2 O) HELIX 1 AA1 PRO A 10 ALA A 26 1 17 HELIX 2 AA2 GLU A 34 ASP A 39 5 6 HELIX 3 AA3 LEU A 96 GLU A 115 1 20 HELIX 4 AA4 PRO A 116 MET A 119 5 4 HELIX 5 AA5 GLY A 137 ASP A 147 1 11 HELIX 6 AA6 ASN A 166 LEU A 176 1 11 HELIX 7 AA7 SER A 216 CYS A 227 1 12 HELIX 8 AA8 PRO A 233 LEU A 251 1 19 SHEET 1 AA1 8 VAL A 77 SER A 86 0 SHEET 2 AA1 8 ARG A 62 SER A 71 -1 N VAL A 69 O VAL A 78 SHEET 3 AA1 8 ARG A 47 PHE A 55 -1 N VAL A 48 O LEU A 70 SHEET 4 AA1 8 LEU A 123 ASP A 126 1 O LEU A 124 N GLY A 49 SHEET 5 AA1 8 CYS A 150 ALA A 154 1 O VAL A 151 N VAL A 125 SHEET 6 AA1 8 LEU A 207 HIS A 213 -1 O TYR A 208 N ALA A 154 SHEET 7 AA1 8 VAL A 192 LEU A 197 -1 N MET A 195 O ILE A 209 SHEET 8 AA1 8 SER A 182 LEU A 186 -1 N LEU A 185 O GLY A 194 LINK O LEU A 45 NA NA A 306 1555 1555 2.27 LINK OE1 GLN A 46 NA NA A 306 1555 1555 2.38 LINK O PHE A 72 NA NA A 306 1555 1555 2.72 LINK O ARG A 174 NA NA A 305 1555 1555 2.31 LINK O LEU A 176 NA NA A 305 1555 1555 2.31 LINK OE1 GLN A 177 NA NA A 305 1555 1555 2.78 LINK NA NA A 305 O HOH A 462 1555 1555 2.28 LINK NA NA A 305 O HOH A 470 1555 1555 2.50 LINK NA NA A 305 O HOH A 521 1555 1555 2.48 LINK NA NA A 306 O HOH A 449 1555 1555 2.79 LINK NA NA A 306 O HOH A 487 1555 1555 2.52 LINK NA NA A 306 O HOH A 507 1555 1555 2.57 CISPEP 1 PHE A 72 PRO A 73 0 6.57 SITE 1 AC1 6 ARG A 62 MET A 84 ALA A 226 LEU A 251 SITE 2 AC1 6 HOH A 407 HOH A 416 SITE 1 AC2 5 ARG A 19 ARG A 23 GLY A 180 ASP A 181 SITE 2 AC2 5 SER A 182 SITE 1 AC3 7 LEU A 75 ARG A 179 ALA A 226 SER A 228 SITE 2 AC3 7 ARG A 229 HOH A 407 HOH A 413 SITE 1 AC4 7 GLU A 20 LEU A 24 PHE A 98 HIS A 141 SITE 2 AC4 7 LEU A 168 LYS A 172 HOH A 402 SITE 1 AC5 7 ARG A 174 LEU A 176 GLN A 177 ARG A 198 SITE 2 AC5 7 HOH A 462 HOH A 470 HOH A 521 SITE 1 AC6 7 LEU A 45 GLN A 46 PHE A 72 PRO A 73 SITE 2 AC6 7 HOH A 449 HOH A 487 HOH A 507 CRYST1 50.949 50.949 102.978 90.00 90.00 120.00 P 31 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019627 0.011332 0.000000 0.00000 SCALE2 0.000000 0.022664 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009711 0.00000