PDB Short entry for 6P09 HEADER LIGASE/DNA 16-MAY-19 6P09 TITLE HUMAN DNA LIGASE 1 BOUND TO AN ADENYLATED, DIDEOXY TERMINATED DNA NICK TITLE 2 WITH 200 MM MG2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA LIGASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA LIGASE I,POLYDEOXYRIBONUCLEOTIDE SYNTHASE [ATP] 1; COMPND 5 EC: 6.5.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*C)-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(P*GP*TP*CP*GP*GP*AP*C)-3'); COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: DNA (5'- COMPND 17 D(*GP*TP*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'); COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LIG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630; SOURCE 19 MOL_ID: 4; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 22 ORGANISM_TAXID: 32630 KEYWDS PROTEIN-DNA COMPLEX, PHOSPHOTRANSFERASE, OB FOLD, DNA BINDING DOMAIN, KEYWDS 2 ADENYLATION DOMAIN, METALLOENZYME, LIGASE, LIGASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.J.SCHELLENBERG,R.S.WILLIAMS,P.S.TUMBALE,A.A.RICCIO REVDAT 2 11-OCT-23 6P09 1 LINK REVDAT 1 11-DEC-19 6P09 0 JRNL AUTH P.P.TUMBALE,T.J.JURKIW,M.J.SCHELLENBERG,A.A.RICCIO, JRNL AUTH 2 P.J.O'BRIEN,R.S.WILLIAMS JRNL TITL TWO-TIERED ENFORCEMENT OF HIGH-FIDELITY DNA LIGATION. JRNL REF NAT COMMUN V. 10 5431 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31780661 JRNL DOI 10.1038/S41467-019-13478-7 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 53178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2673 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.0250 - 5.4704 0.99 2855 143 0.1595 0.1647 REMARK 3 2 5.4704 - 4.3444 1.00 2730 168 0.1279 0.1664 REMARK 3 3 4.3444 - 3.7960 1.00 2696 147 0.1323 0.1624 REMARK 3 4 3.7960 - 3.4492 1.00 2678 145 0.1544 0.1610 REMARK 3 5 3.4492 - 3.2021 0.99 2670 140 0.1597 0.2008 REMARK 3 6 3.2021 - 3.0134 1.00 2660 142 0.1837 0.2200 REMARK 3 7 3.0134 - 2.8626 1.00 2680 148 0.1858 0.2220 REMARK 3 8 2.8626 - 2.7380 1.00 2631 145 0.1836 0.2069 REMARK 3 9 2.7380 - 2.6327 1.00 2682 126 0.1724 0.2145 REMARK 3 10 2.6327 - 2.5418 1.00 2662 138 0.1753 0.2279 REMARK 3 11 2.5418 - 2.4624 1.00 2622 153 0.1856 0.2504 REMARK 3 12 2.4624 - 2.3920 1.00 2611 160 0.1843 0.2263 REMARK 3 13 2.3920 - 2.3290 1.00 2648 142 0.1956 0.2571 REMARK 3 14 2.3290 - 2.2722 1.00 2677 117 0.2026 0.2687 REMARK 3 15 2.2722 - 2.2206 1.00 2638 118 0.2222 0.2856 REMARK 3 16 2.2206 - 2.1733 1.00 2632 132 0.2315 0.2841 REMARK 3 17 2.1733 - 2.1299 1.00 2651 140 0.2334 0.2768 REMARK 3 18 2.1299 - 2.0897 0.99 2622 138 0.2814 0.3172 REMARK 3 19 2.0897 - 2.0524 0.94 2460 131 0.3202 0.3357 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 6077 REMARK 3 ANGLE : 0.804 8354 REMARK 3 CHIRALITY : 0.047 936 REMARK 3 PLANARITY : 0.005 960 REMARK 3 DIHEDRAL : 18.460 3588 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 260 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1020 11.7682 -6.9646 REMARK 3 T TENSOR REMARK 3 T11: 0.3189 T22: 0.2851 REMARK 3 T33: 0.3331 T12: -0.0402 REMARK 3 T13: 0.0067 T23: -0.0556 REMARK 3 L TENSOR REMARK 3 L11: 1.6088 L22: 1.8546 REMARK 3 L33: 2.4331 L12: 0.2944 REMARK 3 L13: -0.3326 L23: -0.5940 REMARK 3 S TENSOR REMARK 3 S11: 0.1372 S12: -0.2319 S13: 0.2851 REMARK 3 S21: 0.2911 S22: -0.0731 S23: 0.0190 REMARK 3 S31: -0.3520 S32: -0.0612 S33: -0.0671 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 456 THROUGH 544 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.1135 -4.2268 -25.0199 REMARK 3 T TENSOR REMARK 3 T11: 0.2969 T22: 0.2884 REMARK 3 T33: 0.3151 T12: 0.0186 REMARK 3 T13: 0.0603 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 2.0383 L22: 2.4905 REMARK 3 L33: 1.9268 L12: 1.4761 REMARK 3 L13: -1.1031 L23: -1.4181 REMARK 3 S TENSOR REMARK 3 S11: -0.1399 S12: 0.1016 S13: -0.0730 REMARK 3 S21: -0.2106 S22: 0.0081 S23: -0.3204 REMARK 3 S31: 0.1680 S32: 0.2512 S33: 0.1408 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 545 THROUGH 741 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8968 -22.8682 -16.4276 REMARK 3 T TENSOR REMARK 3 T11: 0.2338 T22: 0.1918 REMARK 3 T33: 0.2757 T12: -0.0134 REMARK 3 T13: 0.0331 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 2.0836 L22: 2.3898 REMARK 3 L33: 2.8831 L12: -0.3451 REMARK 3 L13: -0.8062 L23: 0.2935 REMARK 3 S TENSOR REMARK 3 S11: -0.0321 S12: 0.1237 S13: -0.1043 REMARK 3 S21: -0.0624 S22: 0.0521 S23: 0.1552 REMARK 3 S31: 0.0543 S32: -0.2248 S33: -0.0197 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 742 THROUGH 784 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3600 1.7304 -12.0081 REMARK 3 T TENSOR REMARK 3 T11: 0.3143 T22: 0.3012 REMARK 3 T33: 0.3117 T12: 0.0687 REMARK 3 T13: -0.0108 T23: 0.0804 REMARK 3 L TENSOR REMARK 3 L11: 2.8307 L22: 1.1478 REMARK 3 L33: 1.6026 L12: -1.5832 REMARK 3 L13: -2.0250 L23: 1.0826 REMARK 3 S TENSOR REMARK 3 S11: 0.0335 S12: 0.2013 S13: 0.0497 REMARK 3 S21: -0.0750 S22: -0.2108 S23: 0.2570 REMARK 3 S31: -0.0759 S32: -0.2756 S33: 0.1750 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 785 THROUGH 901 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.7786 2.9764 -5.0436 REMARK 3 T TENSOR REMARK 3 T11: 0.2298 T22: 0.2865 REMARK 3 T33: 0.3092 T12: 0.0407 REMARK 3 T13: 0.0295 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 2.8636 L22: 2.8556 REMARK 3 L33: 2.7994 L12: 0.0678 REMARK 3 L13: -1.0096 L23: -0.3516 REMARK 3 S TENSOR REMARK 3 S11: 0.1302 S12: 0.0130 S13: 0.2781 REMARK 3 S21: 0.0589 S22: 0.0498 S23: 0.3292 REMARK 3 S31: -0.1897 S32: -0.3056 S33: -0.1672 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1445 -4.9806 7.2440 REMARK 3 T TENSOR REMARK 3 T11: 0.3743 T22: 0.4424 REMARK 3 T33: 0.2488 T12: 0.0594 REMARK 3 T13: 0.0246 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.3274 L22: 0.2692 REMARK 3 L33: 4.6637 L12: -0.1053 REMARK 3 L13: 1.0721 L23: -0.4036 REMARK 3 S TENSOR REMARK 3 S11: 0.1246 S12: -0.2611 S13: -0.0459 REMARK 3 S21: 0.3853 S22: 0.1878 S23: -0.1484 REMARK 3 S31: -0.2523 S32: -0.6871 S33: -0.2933 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6840 3.0525 -21.2171 REMARK 3 T TENSOR REMARK 3 T11: 0.3170 T22: 0.2598 REMARK 3 T33: 0.2496 T12: 0.0261 REMARK 3 T13: 0.0162 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 3.1486 L22: 1.3929 REMARK 3 L33: 3.2239 L12: 0.9401 REMARK 3 L13: -1.4309 L23: -0.8507 REMARK 3 S TENSOR REMARK 3 S11: -0.0424 S12: 0.2864 S13: 0.1543 REMARK 3 S21: 0.2152 S22: 0.2731 S23: -0.0692 REMARK 3 S31: -0.0715 S32: 0.0730 S33: -0.2637 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 9 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0508 2.5670 -20.0344 REMARK 3 T TENSOR REMARK 3 T11: 0.2958 T22: 0.2417 REMARK 3 T33: 0.2691 T12: -0.0007 REMARK 3 T13: 0.0064 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 3.0363 L22: 1.0885 REMARK 3 L33: 3.2437 L12: -0.0405 REMARK 3 L13: -1.0284 L23: -0.1184 REMARK 3 S TENSOR REMARK 3 S11: -0.1359 S12: 0.1901 S13: -0.0266 REMARK 3 S21: 0.0204 S22: 0.1458 S23: 0.2480 REMARK 3 S31: 0.4290 S32: 0.0932 S33: -0.0489 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 16 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6151 -4.3069 7.4707 REMARK 3 T TENSOR REMARK 3 T11: 0.3755 T22: 0.3616 REMARK 3 T33: 0.2457 T12: 0.0210 REMARK 3 T13: 0.0147 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.4534 L22: 0.3227 REMARK 3 L33: 2.2789 L12: -0.2536 REMARK 3 L13: 0.9795 L23: -0.3641 REMARK 3 S TENSOR REMARK 3 S11: -0.0588 S12: -0.0347 S13: 0.0296 REMARK 3 S21: 0.2623 S22: 0.0140 S23: 0.0287 REMARK 3 S31: -0.2880 S32: 0.2188 S33: 0.0305 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6P09 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1000241378. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99203 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53293 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.93400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1XN9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, 100 MM LITHIUM ACETATE, REMARK 280 15% (W/V) POLYETHYLENE GLYCOL 3350, PH 6.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.01950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.72500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.54150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.72500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.01950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.54150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 902 REMARK 465 ILE A 903 REMARK 465 GLN A 904 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DC B 13 O3' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 827 HH12 ARG A 859 1.55 REMARK 500 HZ1 LYS A 504 O HOH A 1109 1.56 REMARK 500 HZ3 LYS A 744 O1P AMP C 101 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG B 11 O3' DG B 11 C3' -0.046 REMARK 500 DC D 18 O3' DC D 18 C3' -0.037 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT B 8 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG D 13 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC D 15 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC D 18 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 349 -78.27 -101.81 REMARK 500 HIS A 436 -123.13 50.36 REMARK 500 ALA A 455 -147.48 -141.73 REMARK 500 GLU A 559 -119.41 56.80 REMARK 500 GLU A 645 55.01 33.39 REMARK 500 GLU A 692 -51.58 -134.17 REMARK 500 ASP A 717 33.32 -95.84 REMARK 500 ASP A 728 -34.17 -132.46 REMARK 500 HIS A 740 62.27 -111.16 REMARK 500 ASP A 827 -116.12 43.53 REMARK 500 SER A 839 -52.46 -159.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1556 DISTANCE = 5.94 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 592 OE1 REMARK 620 2 HOH A1207 O 166.2 REMARK 620 3 HOH A1285 O 87.3 85.2 REMARK 620 4 HOH A1355 O 89.4 78.6 85.8 REMARK 620 5 DG B 11 OP1 100.8 91.0 91.8 169.5 REMARK 620 6 HOH B 119 O 95.1 91.4 174.5 89.3 92.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1003 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 799 O REMARK 620 2 HOH A1192 O 94.6 REMARK 620 3 HOH A1307 O 90.1 70.1 REMARK 620 4 HOH A1323 O 88.1 166.7 96.9 REMARK 620 5 DG C 4 OP1 91.8 96.1 166.2 96.8 REMARK 620 6 HOH C 222 O 177.2 87.7 89.2 89.4 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1258 O REMARK 620 2 HOH A1308 O 96.6 REMARK 620 3 HOH A1497 O 82.0 96.7 REMARK 620 4 HOH A1498 O 78.2 174.7 81.9 REMARK 620 5 HOH A1509 O 92.2 88.1 172.8 92.9 REMARK 620 6 HOH A1529 O 175.8 85.1 93.9 100.0 91.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1004 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1216 O REMARK 620 2 HOH A1248 O 81.2 REMARK 620 3 HOH A1510 O 76.7 86.2 REMARK 620 4 HOH A1526 O 88.9 102.2 162.1 REMARK 620 5 HOH A1530 O 77.3 158.0 84.8 81.7 REMARK 620 6 HOH A1538 O 175.1 103.6 102.6 90.9 97.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1135 O REMARK 620 2 HOH A1146 O 99.2 REMARK 620 3 HOH A1149 O 107.1 152.5 REMARK 620 4 HOH A1335 O 105.6 76.0 89.0 REMARK 620 5 DG C 1 OP2 118.2 86.4 88.2 134.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 102 DBREF 6P09 A 262 904 UNP P18858 DNLI1_HUMAN 262 904 DBREF 6P09 B 3 13 PDB 6P09 6P09 3 13 DBREF 6P09 C 1 7 PDB 6P09 6P09 1 7 DBREF 6P09 D 9 26 PDB 6P09 6P09 9 26 SEQADV 6P09 SER A 260 UNP P18858 EXPRESSION TAG SEQADV 6P09 ASN A 261 UNP P18858 EXPRESSION TAG SEQRES 1 A 645 SER ASN ASP PRO SER GLY TYR ASN PRO ALA LYS ASN ASN SEQRES 2 A 645 TYR HIS PRO VAL GLU ASP ALA CYS TRP LYS PRO GLY GLN SEQRES 3 A 645 LYS VAL PRO TYR LEU ALA VAL ALA ARG THR PHE GLU LYS SEQRES 4 A 645 ILE GLU GLU VAL SER ALA ARG LEU ARG MET VAL GLU THR SEQRES 5 A 645 LEU SER ASN LEU LEU ARG SER VAL VAL ALA LEU SER PRO SEQRES 6 A 645 PRO ASP LEU LEU PRO VAL LEU TYR LEU SER LEU ASN HIS SEQRES 7 A 645 LEU GLY PRO PRO GLN GLN GLY LEU GLU LEU GLY VAL GLY SEQRES 8 A 645 ASP GLY VAL LEU LEU LYS ALA VAL ALA GLN ALA THR GLY SEQRES 9 A 645 ARG GLN LEU GLU SER VAL ARG ALA GLU ALA ALA GLU LYS SEQRES 10 A 645 GLY ASP VAL GLY LEU VAL ALA GLU ASN SER ARG SER THR SEQRES 11 A 645 GLN ARG LEU MET LEU PRO PRO PRO PRO LEU THR ALA SER SEQRES 12 A 645 GLY VAL PHE SER LYS PHE ARG ASP ILE ALA ARG LEU THR SEQRES 13 A 645 GLY SER ALA SER THR ALA LYS LYS ILE ASP ILE ILE LYS SEQRES 14 A 645 GLY LEU PHE VAL ALA CYS ARG HIS SER GLU ALA ARG PHE SEQRES 15 A 645 ILE ALA ARG SER LEU SER GLY ARG LEU ARG LEU GLY LEU SEQRES 16 A 645 ALA GLU GLN SER VAL LEU ALA ALA LEU SER GLN ALA VAL SEQRES 17 A 645 SER LEU THR PRO PRO GLY GLN GLU PHE PRO PRO ALA MET SEQRES 18 A 645 VAL ASP ALA GLY LYS GLY LYS THR ALA GLU ALA ARG LYS SEQRES 19 A 645 THR TRP LEU GLU GLU GLN GLY MET ILE LEU LYS GLN THR SEQRES 20 A 645 PHE CYS GLU VAL PRO ASP LEU ASP ARG ILE ILE PRO VAL SEQRES 21 A 645 LEU LEU GLU HIS GLY LEU GLU ARG LEU PRO GLU HIS CYS SEQRES 22 A 645 LYS LEU SER PRO GLY ILE PRO LEU LYS PRO MET LEU ALA SEQRES 23 A 645 HIS PRO THR ARG GLY ILE SER GLU VAL LEU LYS ARG PHE SEQRES 24 A 645 GLU GLU ALA ALA PHE THR CYS GLU TYR LYS TYR ASP GLY SEQRES 25 A 645 GLN ARG ALA GLN ILE HIS ALA LEU GLU GLY GLY GLU VAL SEQRES 26 A 645 LYS ILE PHE SER ARG ASN GLN GLU ASP ASN THR GLY LYS SEQRES 27 A 645 TYR PRO ASP ILE ILE SER ARG ILE PRO LYS ILE LYS LEU SEQRES 28 A 645 PRO SER VAL THR SER PHE ILE LEU ASP THR GLU ALA VAL SEQRES 29 A 645 ALA TRP ASP ARG GLU LYS LYS GLN ILE GLN PRO PHE GLN SEQRES 30 A 645 VAL LEU THR THR ARG LYS ARG LYS GLU VAL ASP ALA SER SEQRES 31 A 645 GLU ILE GLN VAL GLN VAL CYS LEU TYR ALA PHE ASP LEU SEQRES 32 A 645 ILE TYR LEU ASN GLY GLU SER LEU VAL ARG GLU PRO LEU SEQRES 33 A 645 SER ARG ARG ARG GLN LEU LEU ARG GLU ASN PHE VAL GLU SEQRES 34 A 645 THR GLU GLY GLU PHE VAL PHE ALA THR SER LEU ASP THR SEQRES 35 A 645 LYS ASP ILE GLU GLN ILE ALA GLU PHE LEU GLU GLN SER SEQRES 36 A 645 VAL LYS ASP SER CYS GLU GLY LEU MET VAL LYS THR LEU SEQRES 37 A 645 ASP VAL ASP ALA THR TYR GLU ILE ALA LYS ARG SER HIS SEQRES 38 A 645 ASN TRP LEU LYS LEU LYS LYS ASP TYR LEU ASP GLY VAL SEQRES 39 A 645 GLY ASP THR LEU ASP LEU VAL VAL ILE GLY ALA TYR LEU SEQRES 40 A 645 GLY ARG GLY LYS ARG ALA GLY ARG TYR GLY GLY PHE LEU SEQRES 41 A 645 LEU ALA SER TYR ASP GLU ASP SER GLU GLU LEU GLN ALA SEQRES 42 A 645 ILE CYS LYS LEU GLY THR GLY PHE SER ASP GLU GLU LEU SEQRES 43 A 645 GLU GLU HIS HIS GLN SER LEU LYS ALA LEU VAL LEU PRO SEQRES 44 A 645 SER PRO ARG PRO TYR VAL ARG ILE ASP GLY ALA VAL ILE SEQRES 45 A 645 PRO ASP HIS TRP LEU ASP PRO SER ALA VAL TRP GLU VAL SEQRES 46 A 645 LYS CYS ALA ASP LEU SER LEU SER PRO ILE TYR PRO ALA SEQRES 47 A 645 ALA ARG GLY LEU VAL ASP SER ASP LYS GLY ILE SER LEU SEQRES 48 A 645 ARG PHE PRO ARG PHE ILE ARG VAL ARG GLU ASP LYS GLN SEQRES 49 A 645 PRO GLU GLN ALA THR THR SER ALA GLN VAL ALA CYS LEU SEQRES 50 A 645 TYR ARG LYS GLN SER GLN ILE GLN SEQRES 1 B 11 DG DC DT DG DA DT DG DC DG DT DC SEQRES 1 C 7 DG DT DC DG DG DA DC SEQRES 1 D 18 DG DT DC DC DG DA DC DG DA DC DG DC DA SEQRES 2 D 18 DT DC DA DG DC HET MG A1001 1 HET MG A1002 1 HET MG A1003 1 HET MG A1004 1 HET PEG A1005 17 HET AMP C 101 35 HET MG C 102 1 HETNAM MG MAGNESIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 5 MG 5(MG 2+) FORMUL 9 PEG C4 H10 O3 FORMUL 10 AMP C10 H14 N5 O7 P FORMUL 12 HOH *562(H2 O) HELIX 1 AA1 ASP A 262 TYR A 266 5 5 HELIX 2 AA2 PRO A 288 GLU A 301 1 14 HELIX 3 AA3 ALA A 304 SER A 323 1 20 HELIX 4 AA4 ASP A 326 ASN A 336 1 11 HELIX 5 AA5 PRO A 340 GLY A 344 5 5 HELIX 6 AA6 VAL A 349 GLY A 363 1 15 HELIX 7 AA7 GLN A 365 GLY A 377 1 13 HELIX 8 AA8 ASP A 378 SER A 386 1 9 HELIX 9 AA9 THR A 400 LEU A 414 1 15 HELIX 10 AB1 ALA A 418 CYS A 434 1 17 HELIX 11 AB2 SER A 437 SER A 447 1 11 HELIX 12 AB3 ALA A 455 THR A 470 1 16 HELIX 13 AB4 THR A 488 VAL A 510 1 23 HELIX 14 AB5 ASP A 512 GLY A 524 1 13 HELIX 15 AB6 ARG A 527 CYS A 532 1 6 HELIX 16 AB7 GLY A 550 GLU A 559 1 10 HELIX 17 AB8 ASN A 594 LYS A 597 5 4 HELIX 18 AB9 TYR A 598 LYS A 609 1 12 HELIX 19 AC1 PRO A 634 THR A 639 1 6 HELIX 20 AC2 ASP A 647 ILE A 651 5 5 HELIX 21 AC3 PRO A 674 PHE A 686 1 13 HELIX 22 AC4 ASP A 703 ASP A 717 1 15 HELIX 23 AC5 ASP A 748 LEU A 750 5 3 HELIX 24 AC6 ARG A 768 ALA A 772 5 5 HELIX 25 AC7 SER A 801 LYS A 813 1 13 HELIX 26 AC8 GLN A 883 ALA A 887 5 5 HELIX 27 AC9 THR A 889 GLN A 900 1 12 SHEET 1 AA1 5 ALA A 545 PRO A 547 0 SHEET 2 AA1 5 TRP A 742 LYS A 746 1 O LYS A 744 N HIS A 546 SHEET 3 AA1 5 GLY A 721 THR A 726 -1 N LEU A 722 O LEU A 745 SHEET 4 AA1 5 PHE A 563 TYR A 567 -1 N GLU A 566 O MET A 723 SHEET 5 AA1 5 SER A 698 ASP A 700 -1 O LEU A 699 N CYS A 565 SHEET 1 AA2 5 VAL A 584 PHE A 587 0 SHEET 2 AA2 5 GLN A 572 ALA A 578 -1 N HIS A 577 O LYS A 585 SHEET 3 AA2 5 PHE A 616 ASP A 626 -1 O ALA A 622 N GLN A 572 SHEET 4 AA2 5 VAL A 655 LEU A 665 -1 O CYS A 656 N VAL A 623 SHEET 5 AA2 5 GLU A 668 SER A 669 -1 O GLU A 668 N LEU A 665 SHEET 1 AA3 4 GLN A 631 ILE A 632 0 SHEET 2 AA3 4 PHE A 616 ASP A 626 -1 N ASP A 626 O GLN A 631 SHEET 3 AA3 4 VAL A 655 LEU A 665 -1 O CYS A 656 N VAL A 623 SHEET 4 AA3 4 PHE A 693 PHE A 695 1 O VAL A 694 N ALA A 659 SHEET 1 AA4 6 VAL A 816 LEU A 817 0 SHEET 2 AA4 6 HIS A 834 LEU A 836 -1 O TRP A 835 N LEU A 817 SHEET 3 AA4 6 THR A 756 LEU A 766 -1 N ALA A 764 O HIS A 834 SHEET 4 AA4 6 TYR A 775 ASP A 784 -1 O ALA A 781 N VAL A 760 SHEET 5 AA4 6 GLU A 789 LEU A 796 -1 O GLU A 789 N ASP A 784 SHEET 6 AA4 6 VAL A 824 ARG A 825 1 O ARG A 825 N LEU A 790 SHEET 1 AA5 5 VAL A 816 LEU A 817 0 SHEET 2 AA5 5 HIS A 834 LEU A 836 -1 O TRP A 835 N LEU A 817 SHEET 3 AA5 5 THR A 756 LEU A 766 -1 N ALA A 764 O HIS A 834 SHEET 4 AA5 5 VAL A 841 LYS A 845 -1 O VAL A 844 N LEU A 757 SHEET 5 AA5 5 ARG A 874 VAL A 878 -1 O ARG A 877 N GLU A 843 SHEET 1 AA6 2 ASP A 848 SER A 852 0 SHEET 2 AA6 2 GLY A 867 ARG A 871 -1 O ARG A 871 N ASP A 848 LINK P DG C 1 O3P AMP C 101 1555 1555 1.56 LINK OE1 GLU A 592 MG MG A1001 1555 1555 2.09 LINK O GLY A 799 MG MG A1003 1555 1555 2.12 LINK MG MG A1001 O HOH A1207 1555 1555 2.18 LINK MG MG A1001 O HOH A1285 1555 1555 2.04 LINK MG MG A1001 O HOH A1355 1555 1555 2.11 LINK MG MG A1001 OP1 DG B 11 1555 1555 1.85 LINK MG MG A1001 O HOH B 119 1555 1555 2.07 LINK MG MG A1002 O HOH A1258 1555 1555 2.23 LINK MG MG A1002 O HOH A1308 1555 1555 2.23 LINK MG MG A1002 O HOH A1497 1555 1555 2.05 LINK MG MG A1002 O HOH A1498 1555 1555 2.36 LINK MG MG A1002 O HOH A1509 1555 1555 2.19 LINK MG MG A1002 O HOH A1529 1555 1555 2.23 LINK MG MG A1003 O HOH A1192 1555 1555 2.04 LINK MG MG A1003 O HOH A1307 1555 1555 2.18 LINK MG MG A1003 O HOH A1323 1555 1555 2.13 LINK MG MG A1003 OP1 DG C 4 1555 1555 2.10 LINK MG MG A1003 O HOH C 222 1555 1555 2.15 LINK MG MG A1004 O HOH A1216 1555 1555 2.23 LINK MG MG A1004 O HOH A1248 1555 1555 2.30 LINK MG MG A1004 O HOH A1510 1555 1555 2.34 LINK MG MG A1004 O HOH A1526 1555 1555 2.06 LINK MG MG A1004 O HOH A1530 1555 1555 2.24 LINK MG MG A1004 O HOH A1538 1555 1555 2.20 LINK O HOH A1135 MG MG C 102 1555 1555 1.90 LINK O HOH A1146 MG MG C 102 1555 1555 2.25 LINK O HOH A1149 MG MG C 102 1555 1555 2.08 LINK O HOH A1335 MG MG C 102 1555 1555 2.14 LINK OP2 DG C 1 MG MG C 102 1555 1555 2.24 CISPEP 1 PHE A 476 PRO A 477 0 -1.14 SITE 1 AC1 6 GLU A 592 HOH A1207 HOH A1285 HOH A1355 SITE 2 AC1 6 DG B 11 HOH B 119 SITE 1 AC2 6 HOH A1258 HOH A1308 HOH A1497 HOH A1498 SITE 2 AC2 6 HOH A1509 HOH A1529 SITE 1 AC3 6 GLY A 799 HOH A1192 HOH A1307 HOH A1323 SITE 2 AC3 6 DG C 4 HOH C 222 SITE 1 AC4 6 HOH A1216 HOH A1248 HOH A1510 HOH A1526 SITE 2 AC4 6 HOH A1530 HOH A1538 SITE 1 AC5 4 ALA A 483 LYS A 487 TRP A 495 HOH A1122 SITE 1 AC6 17 GLU A 566 TYR A 567 LYS A 568 TYR A 569 SITE 2 AC6 17 ARG A 573 ARG A 589 GLU A 621 PHE A 660 SITE 3 AC6 17 MET A 723 LYS A 725 TRP A 742 LYS A 744 SITE 4 AC6 17 HOH A1149 DG C 1 HOH C 202 HOH C 208 SITE 5 AC6 17 HOH C 209 SITE 1 AC7 5 HOH A1135 HOH A1146 HOH A1149 HOH A1335 SITE 2 AC7 5 DG C 1 CRYST1 72.039 101.083 115.450 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013881 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009893 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008662 0.00000