PDB Short entry for 6QI4 HEADER METAL BINDING PROTEIN 17-JAN-19 6QI4 TITLE NCS-1 BOUND TO A LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURONAL CALCIUM SENSOR 1; COMPND 3 CHAIN: B, C; COMPND 4 SYNONYM: NCS-1,FREQUENIN HOMOLOG,FREQUENIN-LIKE PROTEIN,FREQUENIN- COMPND 5 LIKE UBIQUITOUS PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NCS1, FLUP, FREQ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CALCIUM SENSOR, SYNAPSE REGULATION, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.J.SANCHEZ-BARRENA,P.BLANCO-GABELLA REVDAT 3 24-JAN-24 6QI4 1 REMARK REVDAT 2 04-OCT-23 6QI4 1 LINK REVDAT 1 17-JUL-19 6QI4 0 JRNL AUTH A.CANAL-MARTIN,J.SASTRE,M.J.SANCHEZ-BARRENA,A.CANALES, JRNL AUTH 2 S.BALDOMINOS,N.PASCUAL,L.MARTINEZ-GONZALEZ,D.MOLERO, JRNL AUTH 3 M.E.FERNANDEZ-VALLE,E.SAEZ,P.BLANCO-GABELLA,E.GOMEZ-RUBIO, JRNL AUTH 4 S.MARTIN-SANTAMARIA,A.SAIZ,A.MANSILLA,F.J.CANADA, JRNL AUTH 5 J.JIMENEZ-BARBERO,A.MARTINEZ,R.PEREZ-FERNANDEZ JRNL TITL INSIGHTS INTO REAL-TIME CHEMICAL PROCESSES IN A CALCIUM JRNL TITL 2 SENSOR PROTEIN-DIRECTED DYNAMIC LIBRARY. JRNL REF NAT COMMUN V. 10 2798 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31243268 JRNL DOI 10.1038/S41467-019-10627-W REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: 000) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 83021 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.250 REMARK 3 FREE R VALUE TEST SET COUNT : 4356 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.3590 - 5.5270 0.98 2647 136 0.1887 0.2086 REMARK 3 2 5.5270 - 4.3884 0.98 2672 175 0.1761 0.1504 REMARK 3 3 4.3884 - 3.8341 0.95 2549 151 0.1692 0.2035 REMARK 3 4 3.8341 - 3.4837 0.97 2624 155 0.1876 0.2357 REMARK 3 5 3.4837 - 3.2341 0.99 2673 140 0.2008 0.2479 REMARK 3 6 3.2341 - 3.0435 0.97 2664 157 0.2190 0.2076 REMARK 3 7 3.0435 - 2.8911 0.97 2593 166 0.2098 0.1975 REMARK 3 8 2.8911 - 2.7653 0.96 2632 112 0.1984 0.2462 REMARK 3 9 2.7653 - 2.6588 0.95 2549 130 0.2096 0.2665 REMARK 3 10 2.6588 - 2.5671 0.97 2650 139 0.2002 0.2251 REMARK 3 11 2.5671 - 2.4868 0.98 2687 175 0.2134 0.2384 REMARK 3 12 2.4868 - 2.4158 0.98 2619 146 0.2049 0.2535 REMARK 3 13 2.4158 - 2.3522 0.97 2659 134 0.2121 0.1936 REMARK 3 14 2.3522 - 2.2948 0.97 2680 151 0.2120 0.2439 REMARK 3 15 2.2948 - 2.2426 0.97 2593 150 0.2142 0.2042 REMARK 3 16 2.2426 - 2.1949 0.97 2695 136 0.2262 0.2874 REMARK 3 17 2.1949 - 2.1510 0.93 2454 168 0.2266 0.2794 REMARK 3 18 2.1510 - 2.1104 0.95 2583 166 0.2579 0.2516 REMARK 3 19 2.1104 - 2.0727 0.97 2626 160 0.2660 0.3029 REMARK 3 20 2.0727 - 2.0376 0.97 2578 146 0.2763 0.3295 REMARK 3 21 2.0376 - 2.0047 0.98 2710 138 0.2902 0.2884 REMARK 3 22 2.0047 - 1.9739 0.98 2650 135 0.3133 0.3364 REMARK 3 23 1.9739 - 1.9448 0.96 2598 143 0.3123 0.3555 REMARK 3 24 1.9448 - 1.9174 0.97 2613 123 0.3299 0.3480 REMARK 3 25 1.9174 - 1.8915 0.97 2646 138 0.3361 0.3582 REMARK 3 26 1.8915 - 1.8670 0.96 2651 141 0.3538 0.3984 REMARK 3 27 1.8670 - 1.8436 0.97 2579 137 0.3580 0.3907 REMARK 3 28 1.8436 - 1.8214 0.94 2621 127 0.3697 0.4046 REMARK 3 29 1.8214 - 1.8002 0.94 2502 152 0.3806 0.4170 REMARK 3 30 1.8002 - 1.7800 0.96 2668 129 0.3890 0.4084 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3229 REMARK 3 ANGLE : 1.303 4318 REMARK 3 CHIRALITY : 0.063 445 REMARK 3 PLANARITY : 0.010 581 REMARK 3 DIHEDRAL : 17.764 1955 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 3 THROUGH 189) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3556 -13.1534 -3.1939 REMARK 3 T TENSOR REMARK 3 T11: 0.1424 T22: 0.2437 REMARK 3 T33: 0.2650 T12: 0.0137 REMARK 3 T13: 0.0303 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 0.4209 L22: 3.3455 REMARK 3 L33: 0.4292 L12: -0.3412 REMARK 3 L13: 0.0293 L23: 0.6610 REMARK 3 S TENSOR REMARK 3 S11: 0.0825 S12: 0.1108 S13: 0.0632 REMARK 3 S21: -0.2612 S22: -0.0945 S23: -0.3770 REMARK 3 S31: -0.0500 S32: 0.0107 S33: 0.0156 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 3 THROUGH 188) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1926 -23.3002 25.4847 REMARK 3 T TENSOR REMARK 3 T11: 0.5144 T22: 0.2449 REMARK 3 T33: 0.2297 T12: -0.0181 REMARK 3 T13: -0.0626 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.7063 L22: 2.6940 REMARK 3 L33: 1.5040 L12: 0.2369 REMARK 3 L13: 0.1391 L23: -0.3555 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: -0.0074 S13: -0.0283 REMARK 3 S21: -0.0702 S22: 0.0409 S23: 0.2402 REMARK 3 S31: 0.3497 S32: -0.0136 S33: 0.0027 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6QI4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1292100207. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43813 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 42.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1G8I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CACODYLATE TRIHYDRATE PH REMARK 280 6.5, 0.2 M SODIUM ACETATE TRIHYDRATE, 30% (V/V) POLYETHYLENE REMARK 280 GLYCOL 8000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.80150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 VAL B 190 REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 LEU C 189 REMARK 465 VAL C 190 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE21 GLN B 170 O HOH B 305 1.56 REMARK 500 HD22 ASN B 5 O HOH B 311 1.56 REMARK 500 OD1 ASP C 60 HG1 THR C 62 1.58 REMARK 500 OH5 1PE B 209 O HOH B 301 2.13 REMARK 500 OH TYR C 108 O HOH C 301 2.16 REMARK 500 OD2 ASP B 157 O HOH B 302 2.17 REMARK 500 OG SER B 40 O HOH B 303 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 P6G B 204 REMARK 610 1PE B 208 REMARK 610 1PE B 209 REMARK 610 1PE B 211 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 205 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 17 O REMARK 620 2 THR B 20 O 80.1 REMARK 620 3 PHE B 22 O 107.5 119.1 REMARK 620 4 ALA B 175 O 116.9 37.9 112.0 REMARK 620 5 HOH B 355 O 85.0 127.7 113.2 119.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 73 OD1 REMARK 620 2 ASN B 75 OD1 74.5 REMARK 620 3 ASP B 77 OD1 79.1 86.7 REMARK 620 4 ARG B 79 O 96.6 166.9 82.2 REMARK 620 5 GLU B 84 OE1 109.9 110.4 162.1 81.5 REMARK 620 6 GLU B 84 OE2 87.7 58.9 145.4 131.4 52.2 REMARK 620 7 HOH B 334 O 154.7 82.4 89.8 104.3 87.4 88.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 109 OD1 REMARK 620 2 ASP B 111 OD1 81.2 REMARK 620 3 ASP B 113 OD1 84.5 76.8 REMARK 620 4 TYR B 115 O 78.4 151.9 82.2 REMARK 620 5 GLU B 120 OE1 112.3 127.2 151.2 78.8 REMARK 620 6 GLU B 120 OE2 99.7 75.1 150.6 127.2 52.8 REMARK 620 7 HOH B 380 O 166.3 85.8 88.2 112.2 79.3 81.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 157 OD1 REMARK 620 2 ASN B 159 OD1 80.3 REMARK 620 3 ASP B 161 OD1 79.0 72.0 REMARK 620 4 LYS B 163 O 86.3 149.1 78.2 REMARK 620 5 GLU B 168 OE1 112.4 128.8 156.6 82.1 REMARK 620 6 GLU B 168 OE2 93.3 80.5 152.3 128.2 50.5 REMARK 620 7 HOH B 315 O 153.7 87.7 75.1 92.5 93.4 107.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 205 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 17 O REMARK 620 2 THR C 20 O 84.2 REMARK 620 3 PHE C 22 O 104.3 111.9 REMARK 620 4 ALA C 175 O 117.9 34.3 106.5 REMARK 620 5 HOH C 332 O 89.6 124.9 122.7 115.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 73 OD1 REMARK 620 2 ASN C 75 OD1 74.2 REMARK 620 3 ASP C 77 OD1 85.5 85.9 REMARK 620 4 ARG C 79 O 95.3 163.0 79.9 REMARK 620 5 GLU C 84 OE1 102.4 123.3 150.7 71.4 REMARK 620 6 GLU C 84 OE2 85.4 72.2 157.9 121.1 51.3 REMARK 620 7 HOH C 306 O 166.8 96.5 84.5 91.4 90.5 100.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 109 OD1 REMARK 620 2 ASP C 111 OD1 77.9 REMARK 620 3 ASP C 113 OD1 79.7 71.2 REMARK 620 4 TYR C 115 O 84.0 147.6 79.4 REMARK 620 5 GLU C 120 OE1 111.2 137.1 150.2 74.6 REMARK 620 6 GLU C 120 OE2 101.1 82.3 152.8 127.8 54.9 REMARK 620 7 HOH C 320 O 161.1 84.5 88.4 108.3 86.3 82.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 157 OD1 REMARK 620 2 ASN C 159 OD1 87.8 REMARK 620 3 ASP C 161 OD1 76.6 90.0 REMARK 620 4 LYS C 163 O 82.5 169.1 82.8 REMARK 620 5 GLU C 168 OE1 115.0 109.9 156.6 79.0 REMARK 620 6 GLU C 168 OE2 82.4 67.9 150.1 115.6 53.0 REMARK 620 7 HOH C 323 O 161.9 96.8 85.8 90.9 80.0 115.6 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE B 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE B 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE B 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE B 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FKW B 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE C 206 DBREF 6QI4 B 1 190 UNP P62166 NCS1_HUMAN 1 190 DBREF 6QI4 C 1 190 UNP P62166 NCS1_HUMAN 1 190 SEQRES 1 B 190 MET GLY LYS SER ASN SER LYS LEU LYS PRO GLU VAL VAL SEQRES 2 B 190 GLU GLU LEU THR ARG LYS THR TYR PHE THR GLU LYS GLU SEQRES 3 B 190 VAL GLN GLN TRP TYR LYS GLY PHE ILE LYS ASP CYS PRO SEQRES 4 B 190 SER GLY GLN LEU ASP ALA ALA GLY PHE GLN LYS ILE TYR SEQRES 5 B 190 LYS GLN PHE PHE PRO PHE GLY ASP PRO THR LYS PHE ALA SEQRES 6 B 190 THR PHE VAL PHE ASN VAL PHE ASP GLU ASN LYS ASP GLY SEQRES 7 B 190 ARG ILE GLU PHE SER GLU PHE ILE GLN ALA LEU SER VAL SEQRES 8 B 190 THR SER ARG GLY THR LEU ASP GLU LYS LEU ARG TRP ALA SEQRES 9 B 190 PHE LYS LEU TYR ASP LEU ASP ASN ASP GLY TYR ILE THR SEQRES 10 B 190 ARG ASN GLU MET LEU ASP ILE VAL ASP ALA ILE TYR GLN SEQRES 11 B 190 MET VAL GLY ASN THR VAL GLU LEU PRO GLU GLU GLU ASN SEQRES 12 B 190 THR PRO GLU LYS ARG VAL ASP ARG ILE PHE ALA MET MET SEQRES 13 B 190 ASP LYS ASN ALA ASP GLY LYS LEU THR LEU GLN GLU PHE SEQRES 14 B 190 GLN GLU GLY SER LYS ALA ASP PRO SER ILE VAL GLN ALA SEQRES 15 B 190 LEU SER LEU TYR ASP GLY LEU VAL SEQRES 1 C 190 MET GLY LYS SER ASN SER LYS LEU LYS PRO GLU VAL VAL SEQRES 2 C 190 GLU GLU LEU THR ARG LYS THR TYR PHE THR GLU LYS GLU SEQRES 3 C 190 VAL GLN GLN TRP TYR LYS GLY PHE ILE LYS ASP CYS PRO SEQRES 4 C 190 SER GLY GLN LEU ASP ALA ALA GLY PHE GLN LYS ILE TYR SEQRES 5 C 190 LYS GLN PHE PHE PRO PHE GLY ASP PRO THR LYS PHE ALA SEQRES 6 C 190 THR PHE VAL PHE ASN VAL PHE ASP GLU ASN LYS ASP GLY SEQRES 7 C 190 ARG ILE GLU PHE SER GLU PHE ILE GLN ALA LEU SER VAL SEQRES 8 C 190 THR SER ARG GLY THR LEU ASP GLU LYS LEU ARG TRP ALA SEQRES 9 C 190 PHE LYS LEU TYR ASP LEU ASP ASN ASP GLY TYR ILE THR SEQRES 10 C 190 ARG ASN GLU MET LEU ASP ILE VAL ASP ALA ILE TYR GLN SEQRES 11 C 190 MET VAL GLY ASN THR VAL GLU LEU PRO GLU GLU GLU ASN SEQRES 12 C 190 THR PRO GLU LYS ARG VAL ASP ARG ILE PHE ALA MET MET SEQRES 13 C 190 ASP LYS ASN ALA ASP GLY LYS LEU THR LEU GLN GLU PHE SEQRES 14 C 190 GLN GLU GLY SER LYS ALA ASP PRO SER ILE VAL GLN ALA SEQRES 15 C 190 LEU SER LEU TYR ASP GLY LEU VAL HET CA B 201 1 HET CA B 202 1 HET CA B 203 1 HET P6G B 204 30 HET NA B 205 1 HET DMS B 206 10 HET ACT B 207 7 HET 1PE B 208 11 HET 1PE B 209 13 HET 1PE B 210 38 HET 1PE B 211 11 HET FKW B 212 39 HET P6G C 201 45 HET CA C 202 1 HET CA C 203 1 HET CA C 204 1 HET NA C 205 1 HET 1PE C 206 38 HETNAM CA CALCIUM ION HETNAM P6G HEXAETHYLENE GLYCOL HETNAM NA SODIUM ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM ACT ACETATE ION HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM FKW 2-(1~{H}-INDOL-3-YL)-~{N}-[(~{E})-(4-NITRO-3-OXIDANYL- HETNAM 2 FKW PHENYL)METHYLIDENEAMINO]ETHANAMIDE HETSYN P6G POLYETHYLENE GLYCOL PEG400 HETSYN 1PE PEG400 FORMUL 3 CA 6(CA 2+) FORMUL 6 P6G 2(C12 H26 O7) FORMUL 7 NA 2(NA 1+) FORMUL 8 DMS C2 H6 O S FORMUL 9 ACT C2 H3 O2 1- FORMUL 10 1PE 5(C10 H22 O6) FORMUL 14 FKW C17 H14 N4 O4 FORMUL 21 HOH *171(H2 O) HELIX 1 AA1 LYS B 9 LYS B 19 1 11 HELIX 2 AA2 THR B 23 CYS B 38 1 16 HELIX 3 AA3 ASP B 44 PHE B 56 1 13 HELIX 4 AA4 PRO B 61 ASP B 73 1 13 HELIX 5 AA5 PHE B 82 GLY B 95 1 14 HELIX 6 AA6 THR B 96 ASP B 109 1 14 HELIX 7 AA7 ARG B 118 GLY B 133 1 16 HELIX 8 AA8 ASN B 134 VAL B 136 5 3 HELIX 9 AA9 PRO B 139 ASN B 143 5 5 HELIX 10 AB1 THR B 144 ASP B 157 1 14 HELIX 11 AB2 LEU B 166 ASP B 176 1 11 HELIX 12 AB3 ASP B 176 SER B 184 1 9 HELIX 13 AB4 LYS C 9 THR C 20 1 12 HELIX 14 AB5 THR C 23 CYS C 38 1 16 HELIX 15 AB6 ASP C 44 PHE C 56 1 13 HELIX 16 AB7 PRO C 61 ASP C 73 1 13 HELIX 17 AB8 PHE C 82 GLY C 95 1 14 HELIX 18 AB9 THR C 96 ASP C 109 1 14 HELIX 19 AC1 ARG C 118 GLY C 133 1 16 HELIX 20 AC2 PRO C 139 ASN C 143 5 5 HELIX 21 AC3 THR C 144 ASP C 157 1 14 HELIX 22 AC4 THR C 165 ASP C 176 1 12 HELIX 23 AC5 ASP C 176 SER C 184 1 9 SHEET 1 AA1 2 GLN B 42 LEU B 43 0 SHEET 2 AA1 2 ILE B 80 GLU B 81 -1 O ILE B 80 N LEU B 43 SHEET 1 AA2 2 TYR B 115 THR B 117 0 SHEET 2 AA2 2 LYS B 163 THR B 165 -1 O LEU B 164 N ILE B 116 SHEET 1 AA3 2 GLN C 42 LEU C 43 0 SHEET 2 AA3 2 ILE C 80 GLU C 81 -1 O ILE C 80 N LEU C 43 SHEET 1 AA4 2 ILE C 116 THR C 117 0 SHEET 2 AA4 2 LYS C 163 LEU C 164 -1 O LEU C 164 N ILE C 116 LINK O THR B 17 NA NA B 205 1555 1555 2.37 LINK O THR B 20 NA NA B 205 1555 1555 2.29 LINK O PHE B 22 NA NA B 205 1555 1555 2.20 LINK OD1 ASP B 73 CA CA B 201 1555 1555 2.48 LINK OD1 ASN B 75 CA CA B 201 1555 1555 1.98 LINK OD1 ASP B 77 CA CA B 201 1555 1555 2.39 LINK O ARG B 79 CA CA B 201 1555 1555 2.02 LINK OE1 GLU B 84 CA CA B 201 1555 1555 2.43 LINK OE2 GLU B 84 CA CA B 201 1555 1555 2.62 LINK OD1 ASP B 109 CA CA B 202 1555 1555 2.30 LINK OD1 ASP B 111 CA CA B 202 1555 1555 2.35 LINK OD1 ASP B 113 CA CA B 202 1555 1555 2.30 LINK O TYR B 115 CA CA B 202 1555 1555 2.35 LINK OE1 GLU B 120 CA CA B 202 1555 1555 2.42 LINK OE2 GLU B 120 CA CA B 202 1555 1555 2.59 LINK OD1 ASP B 157 CA CA B 203 1555 1555 2.36 LINK OD1 ASN B 159 CA CA B 203 1555 1555 2.32 LINK OD1 ASP B 161 CA CA B 203 1555 1555 2.41 LINK O LYS B 163 CA CA B 203 1555 1555 2.22 LINK OE1 GLU B 168 CA CA B 203 1555 1555 2.51 LINK OE2 GLU B 168 CA CA B 203 1555 1555 2.71 LINK O ALA B 175 NA NA B 205 1555 2455 2.38 LINK CA CA B 201 O HOH B 334 1555 1555 2.49 LINK CA CA B 202 O HOH B 380 1555 1555 2.27 LINK CA CA B 203 O HOH B 315 1555 1555 2.47 LINK NA NA B 205 O HOH B 355 1555 2445 2.44 LINK O THR C 17 NA NA C 205 1555 1555 2.18 LINK O THR C 20 NA NA C 205 1555 1555 2.44 LINK O PHE C 22 NA NA C 205 1555 1555 2.41 LINK OD1 ASP C 73 CA CA C 202 1555 1555 2.37 LINK OD1 ASN C 75 CA CA C 202 1555 1555 2.07 LINK OD1 ASP C 77 CA CA C 202 1555 1555 2.32 LINK O ARG C 79 CA CA C 202 1555 1555 2.19 LINK OE1 GLU C 84 CA CA C 202 1555 1555 2.68 LINK OE2 GLU C 84 CA CA C 202 1555 1555 2.43 LINK OD1 ASP C 109 CA CA C 203 1555 1555 2.36 LINK OD1 ASP C 111 CA CA C 203 1555 1555 2.38 LINK OD1 ASP C 113 CA CA C 203 1555 1555 2.03 LINK O TYR C 115 CA CA C 203 1555 1555 2.32 LINK OE1 GLU C 120 CA CA C 203 1555 1555 2.45 LINK OE2 GLU C 120 CA CA C 203 1555 1555 2.35 LINK OD1 ASP C 157 CA CA C 204 1555 1555 2.46 LINK OD1 ASN C 159 CA CA C 204 1555 1555 2.21 LINK OD1 ASP C 161 CA CA C 204 1555 1555 2.24 LINK O LYS C 163 CA CA C 204 1555 1555 2.30 LINK OE1 GLU C 168 CA CA C 204 1555 1555 2.48 LINK OE2 GLU C 168 CA CA C 204 1555 1555 2.46 LINK O ALA C 175 NA NA C 205 1555 2556 2.53 LINK CA CA C 202 O HOH C 306 1555 1555 2.47 LINK CA CA C 203 O HOH C 320 1555 1555 2.41 LINK CA CA C 204 O HOH C 323 1555 1555 2.34 LINK NA NA C 205 O HOH C 332 1555 2546 2.37 SITE 1 AC1 6 ASP B 73 ASN B 75 ASP B 77 ARG B 79 SITE 2 AC1 6 GLU B 84 HOH B 334 SITE 1 AC2 6 ASP B 109 ASP B 111 ASP B 113 TYR B 115 SITE 2 AC2 6 GLU B 120 HOH B 380 SITE 1 AC3 6 ASP B 157 ASN B 159 ASP B 161 LYS B 163 SITE 2 AC3 6 GLU B 168 HOH B 315 SITE 1 AC4 7 PHE B 22 GLN B 29 TRP B 30 SER B 93 SITE 2 AC4 7 ARG B 94 ASP B 187 HOH B 391 SITE 1 AC5 3 THR B 17 THR B 20 PHE B 22 SITE 1 AC6 6 MET B 155 LYS B 158 GLU B 171 GLY B 172 SITE 2 AC6 6 HOH B 310 HOH B 367 SITE 1 AC7 3 LYS B 19 THR B 20 TYR B 21 SITE 1 AC8 3 THR B 92 LEU B 183 FKW B 212 SITE 1 AC9 4 ASP B 111 ASN B 112 HOH B 301 ASP C 123 SITE 1 AD1 9 TYR B 108 ARG B 148 ILE B 152 PHE B 169 SITE 2 AD1 9 SER B 173 LEU B 183 1PE B 211 HOH B 317 SITE 3 AD1 9 HOH B 319 SITE 1 AD2 4 ARG B 148 ASP B 176 SER B 178 1PE B 210 SITE 1 AD3 8 TYR B 52 VAL B 68 PHE B 72 PHE B 85 SITE 2 AD3 8 TRP B 103 1PE B 208 HOH B 345 HOH B 398 SITE 1 AD4 8 TYR C 108 TYR C 129 ARG C 148 PHE C 169 SITE 2 AD4 8 SER C 173 ILE C 179 HOH C 301 HOH C 338 SITE 1 AD5 6 ASP C 73 ASN C 75 ASP C 77 ARG C 79 SITE 2 AD5 6 GLU C 84 HOH C 306 SITE 1 AD6 6 ASP C 109 ASP C 111 ASP C 113 TYR C 115 SITE 2 AD6 6 GLU C 120 HOH C 320 SITE 1 AD7 6 ASP C 157 ASN C 159 ASP C 161 LYS C 163 SITE 2 AD7 6 GLU C 168 HOH C 323 SITE 1 AD8 3 THR C 17 THR C 20 PHE C 22 SITE 1 AD9 4 TYR C 52 PHE C 64 THR C 92 HOH C 307 CRYST1 53.729 55.603 77.725 90.00 94.97 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018612 0.000000 0.001619 0.00000 SCALE2 0.000000 0.017985 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012914 0.00000