PDB Short entry for 6QMP HEADER TRANSCRIPTION 08-FEB-19 6QMP TITLE NF-YB/C HETERODIMER IN COMPLEX WITH NF-YA PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CAAT BOX DNA-BINDING PROTEIN SUBUNIT A,NUCLEAR TRANSCRIPTION COMPND 5 FACTOR Y SUBUNIT A,NF-YA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: CAAT BOX DNA-BINDING PROTEIN SUBUNIT B,NUCLEAR TRANSCRIPTION COMPND 11 FACTOR Y SUBUNIT B,NF-YB; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA; COMPND 15 CHAIN: C; COMPND 16 SYNONYM: CAAT BOX DNA-BINDING PROTEIN SUBUNIT C,NUCLEAR TRANSCRIPTION COMPND 17 FACTOR Y SUBUNIT C,NF-YC,TRANSACTIVATOR HSM-1/2; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 GENE: NFYB, HAP3; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 GENE: NFYC; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PEPTIDE HISTONE FOLD TRANSCRIPTION FACTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.KIEHSTALLER,S.JEGANATHAN,N.M.PEARCE,M.WENDT,T.N.GROSSMANN,S.HENNIG REVDAT 5 24-JAN-24 6QMP 1 REMARK REVDAT 4 13-JUL-22 6QMP 1 COMPND SOURCE AUTHOR REMARK REVDAT 4 2 1 DBREF SEQADV SEQRES HET REVDAT 4 3 1 HETNAM HETSYN FORMUL HELIX REVDAT 4 4 1 SHEET LINK SITE SCALE REVDAT 4 5 1 ATOM REVDAT 3 27-NOV-19 6QMP 1 JRNL REVDAT 2 30-OCT-19 6QMP 1 JRNL REVDAT 1 02-OCT-19 6QMP 0 JRNL AUTH S.JEGANATHAN,M.WENDT,S.KIEHSTALLER,D.BRANCACCIO,A.KUEPPER, JRNL AUTH 2 N.POSPIECH,A.CAROTENUTO,E.NOVELLINO,S.HENNIG,T.N.GROSSMANN JRNL TITL CONSTRAINED PEPTIDES WITH FINE-TUNED FLEXIBILITY INHIBIT JRNL TITL 2 NF-Y TRANSCRIPTION FACTOR ASSEMBLY. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 58 17351 2019 JRNL REFN ESSN 1521-3773 JRNL PMID 31539186 JRNL DOI 10.1002/ANIE.201907901 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 14573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 766 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1056 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1585 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 17 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43000 REMARK 3 B22 (A**2) : 0.43000 REMARK 3 B33 (A**2) : -1.39000 REMARK 3 B12 (A**2) : 0.21000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.179 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.162 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.147 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.636 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1607 ; 0.010 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 1621 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2156 ; 1.372 ; 1.892 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3725 ; 1.124 ; 2.714 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 190 ; 5.205 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;33.089 ;21.250 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 320 ;14.757 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;14.685 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 244 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1769 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 369 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 268 A 296 REMARK 3 ORIGIN FOR THE GROUP (A): 32.1090 -14.2060 17.3260 REMARK 3 T TENSOR REMARK 3 T11: 0.1499 T22: 0.6828 REMARK 3 T33: 0.4370 T12: 0.1309 REMARK 3 T13: 0.0367 T23: 0.0410 REMARK 3 L TENSOR REMARK 3 L11: 4.6699 L22: 8.0703 REMARK 3 L33: 5.6962 L12: -0.3776 REMARK 3 L13: 0.1432 L23: -0.5755 REMARK 3 S TENSOR REMARK 3 S11: -0.0583 S12: -0.4895 S13: -0.3776 REMARK 3 S21: 0.3132 S22: -0.0220 S23: -0.1868 REMARK 3 S31: 0.7964 S32: 0.1722 S33: 0.0803 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 54 B 143 REMARK 3 ORIGIN FOR THE GROUP (A): 22.3710 -9.2950 4.1230 REMARK 3 T TENSOR REMARK 3 T11: 0.0826 T22: 0.3535 REMARK 3 T33: 0.4901 T12: 0.1451 REMARK 3 T13: -0.0012 T23: -0.0765 REMARK 3 L TENSOR REMARK 3 L11: 5.9527 L22: 2.7764 REMARK 3 L33: 3.4068 L12: -0.5371 REMARK 3 L13: -1.3375 L23: 0.8881 REMARK 3 S TENSOR REMARK 3 S11: -0.0707 S12: -0.2966 S13: 0.1146 REMARK 3 S21: -0.1343 S22: -0.2474 S23: 0.2865 REMARK 3 S31: 0.1831 S32: -0.1182 S33: 0.3181 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 42 C 120 REMARK 3 ORIGIN FOR THE GROUP (A): 28.8740 -10.0530 3.4220 REMARK 3 T TENSOR REMARK 3 T11: 0.1352 T22: 0.3020 REMARK 3 T33: 0.4067 T12: 0.1894 REMARK 3 T13: 0.0150 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 6.6618 L22: 1.8200 REMARK 3 L33: 3.0624 L12: 0.8508 REMARK 3 L13: -2.2172 L23: 0.3124 REMARK 3 S TENSOR REMARK 3 S11: -0.0376 S12: -0.2577 S13: -0.1078 REMARK 3 S21: -0.1130 S22: -0.2228 S23: 0.1373 REMARK 3 S31: 0.0703 S32: -0.0933 S33: 0.2604 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 6QMP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100363. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978570 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15380 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 18.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 18.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.810 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4CSR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH9.0 0.2 M NAAC 30% REMARK 280 PEG4000, VAPOR DIFFUSION, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.40000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.70000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.70000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 89.40000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 206 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 49 REMARK 465 PRO B 50 REMARK 465 SER B 51 REMARK 465 PHE B 52 REMARK 465 GLN B 107 REMARK 465 GLU B 108 REMARK 465 LYS B 109 REMARK 465 ARG B 110 REMARK 465 LYS B 111 REMARK 465 GLY C 25 REMARK 465 PRO C 26 REMARK 465 MET C 27 REMARK 465 GLU C 28 REMARK 465 GLU C 29 REMARK 465 ILE C 30 REMARK 465 ARG C 31 REMARK 465 ASN C 32 REMARK 465 LEU C 33 REMARK 465 THR C 34 REMARK 465 VAL C 35 REMARK 465 LYS C 36 REMARK 465 ASP C 37 REMARK 465 PHE C 38 REMARK 465 ARG C 39 REMARK 465 VAL C 40 REMARK 465 GLN C 41 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 289 -129.00 -89.83 REMARK 500 GLU A 295 -68.92 -101.12 REMARK 500 GLU B 54 -39.88 70.32 REMARK 500 GLU B 103 44.14 -107.24 REMARK 500 REMARK 500 REMARK: NULL DBREF 6QMP A 268 296 UNP P23511 NFYA_HUMAN 267 295 DBREF 6QMP B 51 143 UNP P25208 NFYB_HUMAN 51 143 DBREF 6QMP C 27 120 UNP Q13952 NFYC_HUMAN 27 120 SEQADV 6QMP ACE A 266 UNP P23511 ACETYLATION SEQADV 6QMP NH2 A 298 UNP P23511 AMIDATION SEQADV 6QMP GLY B 49 UNP P25208 EXPRESSION TAG SEQADV 6QMP PRO B 50 UNP P25208 EXPRESSION TAG SEQADV 6QMP GLY C 25 UNP Q13952 EXPRESSION TAG SEQADV 6QMP PRO C 26 UNP Q13952 EXPRESSION TAG SEQRES 1 A 31 ACE VAL ASN ALA LYS GLN TYR HIS ARG ILE LEU LYS ARG SEQRES 2 A 31 ARG GLN ALA ARG ALA LYS LEU GLU ALA GLU GLY LYS ILE SEQRES 3 A 31 PRO LYS GLU ARG NH2 SEQRES 1 B 95 GLY PRO SER PHE ARG GLU GLN ASP ILE TYR LEU PRO ILE SEQRES 2 B 95 ALA ASN VAL ALA ARG ILE MET LYS ASN ALA ILE PRO GLN SEQRES 3 B 95 THR GLY LYS ILE ALA LYS ASP ALA LYS GLU CYS VAL GLN SEQRES 4 B 95 GLU CYS VAL SER GLU PHE ILE SER PHE ILE THR SER GLU SEQRES 5 B 95 ALA SER GLU ARG CYS HIS GLN GLU LYS ARG LYS THR ILE SEQRES 6 B 95 ASN GLY GLU ASP ILE LEU PHE ALA MET SER THR LEU GLY SEQRES 7 B 95 PHE ASP SER TYR VAL GLU PRO LEU LYS LEU TYR LEU GLN SEQRES 8 B 95 LYS PHE ARG GLU SEQRES 1 C 96 GLY PRO MET GLU GLU ILE ARG ASN LEU THR VAL LYS ASP SEQRES 2 C 96 PHE ARG VAL GLN GLU LEU PRO LEU ALA ARG ILE LYS LYS SEQRES 3 C 96 ILE MET LYS LEU ASP GLU ASP VAL LYS MET ILE SER ALA SEQRES 4 C 96 GLU ALA PRO VAL LEU PHE ALA LYS ALA ALA GLN ILE PHE SEQRES 5 C 96 ILE THR GLU LEU THR LEU ARG ALA TRP ILE HIS THR GLU SEQRES 6 C 96 ASP ASN LYS ARG ARG THR LEU GLN ARG ASN ASP ILE ALA SEQRES 7 C 96 MET ALA ILE THR LYS PHE ASP GLN PHE ASP PHE LEU ILE SEQRES 8 C 96 ASP ILE VAL PRO ARG HET ACE A 266 3 HET NH2 A 298 1 HETNAM ACE ACETYL GROUP HETNAM NH2 AMINO GROUP FORMUL 1 ACE C2 H4 O FORMUL 1 NH2 H2 N FORMUL 4 HOH *17(H2 O) HELIX 1 AA1 GLN A 272 GLU A 289 1 18 HELIX 2 AA2 PRO B 60 ILE B 72 1 13 HELIX 3 AA3 ALA B 79 GLU B 103 1 25 HELIX 4 AA4 ASN B 114 LEU B 125 1 12 HELIX 5 AA5 PHE B 127 SER B 129 5 3 HELIX 6 AA6 TYR B 130 GLU B 143 1 14 HELIX 7 AA7 PRO C 44 LYS C 53 1 10 HELIX 8 AA8 ALA C 63 ASN C 91 1 29 HELIX 9 AA9 GLN C 97 LYS C 107 1 11 HELIX 10 AB1 PHE C 108 ILE C 115 5 8 SHEET 1 AA1 2 LYS B 77 ILE B 78 0 SHEET 2 AA1 2 THR C 95 LEU C 96 1 O LEU C 96 N LYS B 77 LINK C ACE A 266 N VAL A 268 1555 1555 1.33 LINK C ARG A 296 N NH2 A 298 1555 1555 1.32 CRYST1 52.900 52.900 134.100 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018904 0.010914 0.000000 0.00000 SCALE2 0.000000 0.021828 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007457 0.00000 HETATM 1 C ACE A 266 40.976 0.842 15.554 1.00 86.24 C HETATM 2 O ACE A 266 41.242 0.228 14.565 1.00 99.73 O HETATM 3 CH3 ACE A 266 41.999 1.751 16.209 1.00 84.30 C