PDB Short entry for 6RAR
HEADER    DNA BINDING PROTEIN                     07-APR-19   6RAR              
TITLE     PMAR-LIG_PRES3-MN                                                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA (5'-                                                   
COMPND   3 D(*TP*TP*CP*CP*GP*AP*CP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-   
COMPND   4 3');                                                                 
COMPND   5 CHAIN: B;                                                            
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MOL_ID: 2;                                                           
COMPND   8 MOLECULE: DNA/RNA (5'-D(*AP*TP*TP*GP*CP*GP*AP*C)-R(P*(OMC))-D(P*C)-  
COMPND   9 3');                                                                 
COMPND  10 CHAIN: C;                                                            
COMPND  11 ENGINEERED: YES;                                                     
COMPND  12 MOL_ID: 3;                                                           
COMPND  13 MOLECULE: DNA (5'-D(P*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*A)-3');          
COMPND  14 CHAIN: D;                                                            
COMPND  15 ENGINEERED: YES;                                                     
COMPND  16 MOL_ID: 4;                                                           
COMPND  17 MOLECULE: ATP-DEPENDENT DNA LIGASE;                                  
COMPND  18 CHAIN: I;                                                            
COMPND  19 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE   4 ORGANISM_TAXID: 32630;                                               
SOURCE   5 MOL_ID: 2;                                                           
SOURCE   6 SYNTHETIC: YES;                                                      
SOURCE   7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE   8 ORGANISM_TAXID: 32630;                                               
SOURCE   9 MOL_ID: 3;                                                           
SOURCE  10 SYNTHETIC: YES;                                                      
SOURCE  11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  12 ORGANISM_TAXID: 32630;                                               
SOURCE  13 MOL_ID: 4;                                                           
SOURCE  14 ORGANISM_SCIENTIFIC: PROCHLOROCOCCUS MARINUS STR. MIT 9302;          
SOURCE  15 ORGANISM_TAXID: 74545;                                               
SOURCE  16 GENE: EU96_0746;                                                     
SOURCE  17 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  18 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    DNA LIGASE, ATP-DEPENDENT, LIGASE-DNA CO-CRYSTAL STRUCTURE,           
KEYWDS   2 DETERMINANTS IN DNA BINDING, DNA BINDING PROTEIN                     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    H.K.S.LEIROS,A.WILLIAMSON                                             
REVDAT   2   29-JAN-20 6RAR    1       JRNL                                     
REVDAT   1   10-JUL-19 6RAR    0                                                
JRNL        AUTH   A.WILLIAMSON,H.S.LEIROS                                      
JRNL        TITL   STRUCTURAL INTERMEDIATES OF A DNA-LIGASE COMPLEX ILLUMINATE  
JRNL        TITL 2 THE ROLE OF THE CATALYTIC METAL ION AND MECHANISM OF         
JRNL        TITL 3 PHOSPHODIESTER BOND FORMATION.                               
JRNL        REF    NUCLEIC ACIDS RES.            V.  47  7147 2019              
JRNL        REFN                   ESSN 1362-4962                               
JRNL        PMID   31312841                                                     
JRNL        DOI    10.1093/NAR/GKZ596                                           
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.79 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (1.14_3260: ???)                              
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 24.29                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.340                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 88.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 57870                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.234                           
REMARK   3   R VALUE            (WORKING SET) : 0.233                           
REMARK   3   FREE R VALUE                     : 0.264                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.970                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2875                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 24.2935 -  4.9117    0.96     3923   244  0.2173 0.2367        
REMARK   3     2  4.9117 -  3.9038    0.97     3923   234  0.1847 0.2161        
REMARK   3     3  3.9038 -  3.4118    0.95     3845   191  0.2038 0.2465        
REMARK   3     4  3.4118 -  3.1006    0.96     3873   185  0.2239 0.2614        
REMARK   3     5  3.1006 -  2.8787    0.98     3944   199  0.2577 0.3100        
REMARK   3     6  2.8787 -  2.7092    0.98     3937   200  0.2663 0.2949        
REMARK   3     7  2.7092 -  2.5737    0.97     3954   151  0.2592 0.2789        
REMARK   3     8  2.5737 -  2.4618    0.98     3904   243  0.2643 0.3219        
REMARK   3     9  2.4618 -  2.3671    0.98     3881   263  0.2629 0.3024        
REMARK   3    10  2.3671 -  2.2855    0.94     3781   159  0.2605 0.3158        
REMARK   3    11  2.2855 -  2.2141    0.85     3403   184  0.2737 0.3042        
REMARK   3    12  2.2141 -  2.1508    0.77     3126   139  0.2731 0.2819        
REMARK   3    13  2.1508 -  2.0942    0.64     2553   164  0.2901 0.2995        
REMARK   3    14  2.0942 -  2.0432    0.48     1933    86  0.3014 0.3099        
REMARK   3    15  2.0432 -  1.9967    0.39     1552    79  0.2909 0.3344        
REMARK   3    16  1.9967 -  1.9543    0.32     1290    56  0.3103 0.2991        
REMARK   3    17  1.9543 -  1.9152    0.24      953    45  0.3055 0.3401        
REMARK   3    18  1.9152 -  1.8791    0.15      588    23  0.3140 0.3778        
REMARK   3    19  1.8791 -  1.8455    0.09      346    12  0.3385 0.4421        
REMARK   3    20  1.8455 -  1.8142    0.05      198     8  0.3578 0.3602        
REMARK   3    21  1.8142 -  1.7850    0.02       88    10  0.3588 0.3855        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.280            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.430           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 29.10                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.018           4583                                  
REMARK   3   ANGLE     :  1.180           6341                                  
REMARK   3   CHIRALITY :  0.055            686                                  
REMARK   3   PLANARITY :  0.005            663                                  
REMARK   3   DIHEDRAL  : 11.512           3513                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 6RAR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-APR-19.                  
REMARK 100 THE DEPOSITION ID IS D_1292101699.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 25-AUG-18                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ESRF                               
REMARK 200  BEAMLINE                       : ID23-1                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.991872                           
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS3 S 6M              
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : AIMLESS                            
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 57936                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.785                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 68.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 88.6                               
REMARK 200  DATA REDUNDANCY                : 3.100                              
REMARK 200  R MERGE                    (I) : 0.09600                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 3.1000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.98                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 59.7                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.56000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.400                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 6RAU                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 67.03                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.73                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 17-18% PEG 8K, 100 MM AMMONIUM           
REMARK 280  SULFATE, 100 MM BIS-TRIS PH 5.5., VAPOR DIFFUSION, TEMPERATURE      
REMARK 280  277K                                                                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       51.65750            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC                 
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 8950 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 25240 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -80.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, D, I                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470      DC B   7    C1'                                                 
REMARK 470     HIS I  18    CE1                                                 
REMARK 470     GLU I  62    CD   OE1  OE2                                       
REMARK 470     LYS I  65    CD   CE   NZ                                        
REMARK 470     GLU I  72    CD                                                  
REMARK 470     LYS I  76    CE   NZ                                             
REMARK 470     LYS I 133    CD   CE   NZ                                        
REMARK 470     LYS I 134    NZ                                                  
REMARK 470     GLU I 155    CD   OE1  OE2                                       
REMARK 470     LYS I 156    CE   NZ                                             
REMARK 470     LYS I 181    NZ                                                  
REMARK 470     GLU I 208    CD   OE1  OE2                                       
REMARK 470     GLN I 227    CD                                                  
REMARK 470     ASP I 228    CB   CG   OD1  OD2                                  
REMARK 470     LYS I 231    CE   NZ                                             
REMARK 470     LYS I 239    CD   CE   NZ                                        
REMARK 470     LYS I 259    CG   CD   CE   NZ                                   
REMARK 470     LYS I 275    CG   CD   CE   NZ                                   
REMARK 470     LYS I 279    NZ                                                  
REMARK 470     LEU I 282    CB   CG   CD1  CD2                                  
REMARK 470     LYS I 285    CD   CE   NZ                                        
REMARK 470     ASN I 294    ND2                                                 
REMARK 470     ASN I 310    ND2                                                 
REMARK 470     LYS I 311    CD   CE   NZ                                        
REMARK 470     LYS I 350    CG   CD   CE   NZ                                   
REMARK 470     GLU I 393    CD                                                  
REMARK 470     LYS I 398    CD                                                  
REMARK 470     LYS I 400    CD   CE   NZ                                        
REMARK 470     LYS I 418    NZ                                                  
REMARK 470     ARG I 434    CZ   NH1  NH2                                       
REMARK 470     PHE I 436    CG   CD1  CD2  CE1  CE2  CZ                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   H42   DC B     7     H61   DA D    36              1.33            
REMARK 500   HB2  GLU I   371     O    HOH I   610              1.39            
REMARK 500  HH12  ARG I   261     OE2  GLU I   331              1.50            
REMARK 500   O    GLU I    62     HZ2  LYS I   104              1.58            
REMARK 500   O    HOH B   140     O    HOH B   153              1.84            
REMARK 500   O    HOH B   106     O    HOH B   144              1.88            
REMARK 500   OP1   DA D    36     O    HOH D   401              1.90            
REMARK 500   O    HOH I   800     O    HOH I   863              1.92            
REMARK 500   O    HOH I   750     O    HOH I   850              1.99            
REMARK 500   OE1  GLU I    16     O    HOH I   601              2.02            
REMARK 500   O    ASP I   243     O    HOH I   602              2.02            
REMARK 500   O    HOH B   107     O    HOH B   138              2.03            
REMARK 500   O    HOH I   730     O    HOH I   750              2.05            
REMARK 500   O    HOH I   806     O    HOH I   867              2.05            
REMARK 500   O    HOH D   425     O    HOH I   758              2.05            
REMARK 500   O    HOH B   129     O    HOH B   152              2.05            
REMARK 500   O    HOH I   695     O    HOH I   861              2.05            
REMARK 500   OP1   DC D    32     O2P  AMP D   300              2.06            
REMARK 500   CB   GLU I   371     O    HOH I   610              2.06            
REMARK 500   OE2  GLU I   125     O    HOH I   603              2.08            
REMARK 500   O    HOH I   804     O    HOH I   853              2.08            
REMARK 500   OG1  THR I    87     O    HOH I   604              2.11            
REMARK 500   O    HOH I   795     O    HOH I   850              2.12            
REMARK 500   O    HOH B   134     O    HOH I   616              2.12            
REMARK 500   O    HOH B   104     O    HOH B   148              2.12            
REMARK 500   OE1  GLU I   293     O    HOH I   605              2.13            
REMARK 500   C    GLU I   371     O    HOH I   610              2.14            
REMARK 500   O    HOH I   822     O    HOH I   826              2.14            
REMARK 500   O2    DT B    10     O    HOH B   101              2.16            
REMARK 500   O    HOH I   674     O    HOH I   864              2.16            
REMARK 500   NH1  ARG I   261     OE2  GLU I   331              2.17            
REMARK 500   O    HOH B   124     O    HOH B   126              2.18            
REMARK 500   O    HOH C   209     O    HOH C   214              2.19            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500     DT B   2   C5     DT B   2   C7     -0.038                       
REMARK 500     DG B  11   O3'    DG B  11   C3'    -0.047                       
REMARK 500     DT B  21   C5     DT B  21   C7     -0.038                       
REMARK 500     DT C  23   C5     DT C  23   C7     -0.040                       
REMARK 500     DC D  32   P      DC D  32   OP3    -0.122                       
REMARK 500     DT D  35   C5     DT D  35   C7     -0.036                       
REMARK 500     DT D  37   C5     DT D  37   C7     -0.044                       
REMARK 500    GLN I 179   CG    GLN I 179   CD     -0.224                       
REMARK 500    GLN I 179   CD    GLN I 179   OE1     0.338                       
REMARK 500    GLN I 179   CD    GLN I 179   NE2    -0.397                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DC B   3   O4' -  C4' -  C3' ANGL. DEV. =  -2.7 DEGREES          
REMARK 500     DG B  12   O4' -  C1' -  N9  ANGL. DEV. =   1.8 DEGREES          
REMARK 500     DG B  14   O4' -  C1' -  N9  ANGL. DEV. =   1.8 DEGREES          
REMARK 500     DC C  29   O4' -  C1' -  N1  ANGL. DEV. =   4.2 DEGREES          
REMARK 500    GLN I 179   CG  -  CD  -  OE1 ANGL. DEV. = -19.8 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    GLN I  67     -127.05   -112.77                                   
REMARK 500    PHE I 110      -64.59   -155.18                                   
REMARK 500    SER I 124     -164.51   -127.36                                   
REMARK 500    ALA I 132       -5.92    -58.83                                   
REMARK 500    HIS I 154       49.29   -144.85                                   
REMARK 500    SER I 223     -158.91   -140.38                                   
REMARK 500    ASN I 263       35.80    -85.93                                   
REMARK 500    SER I 281      -12.23    -40.80                                   
REMARK 500    LYS I 431      -60.47   -105.89                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH I 889        DISTANCE =  5.87 ANGSTROMS                       
REMARK 525    HOH I 890        DISTANCE =  5.91 ANGSTROMS                       
REMARK 525    HOH I 891        DISTANCE =  6.00 ANGSTROMS                       
REMARK 525    HOH I 892        DISTANCE =  6.22 ANGSTROMS                       
REMARK 525    HOH I 893        DISTANCE =  6.46 ANGSTROMS                       
REMARK 525    HOH I 894        DISTANCE =  6.48 ANGSTROMS                       
REMARK 525    HOH I 895        DISTANCE =  8.12 ANGSTROMS                       
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN C 101  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1  DC C  31   O3'                                                    
REMARK 620 2  DC D  32   OP3  64.5                                              
REMARK 620 3 HOH I 613   O    97.2  78.6                                        
REMARK 620 4 HOH I 611   O    84.7 148.6 100.1                                  
REMARK 620 5 HOH I 680   O   162.8  98.5  81.3 112.4                            
REMARK 620 N                    1     2     3     4                             
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MN C 101                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue AMP D 300                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 I 501                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 6RAU   RELATED DB: PDB                                   
REMARK 900 IN THE SAME PAPER                                                    
REMARK 900 RELATED ID: 6RCE   RELATED DB: PDB                                   
REMARK 900 IN THE SAME PAPER                                                    
REMARK 900 RELATED ID: 6RAS   RELATED DB: PDB                                   
REMARK 900 IN THE SAME PAPER                                                    
DBREF  6RAR B    1    21  PDB    6RAR     6RAR             1     21             
DBREF  6RAR C   22    31  PDB    6RAR     6RAR            22     31             
DBREF  6RAR D   32    42  PDB    6RAR     6RAR            32     42             
DBREF1 6RAR I    5   436  UNP                  A0A0A2ACP7_PROMR                 
DBREF2 6RAR I     A0A0A2ACP7                          5         436             
SEQRES   1 B   21   DT  DT  DC  DC  DG  DA  DC  DA  DG  DT  DG  DG  DG          
SEQRES   2 B   21   DG  DT  DC  DG  DC  DA  DA  DT                              
SEQRES   1 C   10   DA  DT  DT  DG  DC  DG  DA  DC OMC  DC                      
SEQRES   1 D   11   DC  DA  DC  DT  DA  DT  DC  DG  DG  DA  DA                  
SEQRES   1 I  432  GLU LEU PHE LYS GLU GLU ILE ILE HIS GLN LEU GLU LEU          
SEQRES   2 I  432  HIS PRO SER ARG LEU ASP LYS GLU LYS ILE ILE SER GLU          
SEQRES   3 I  432  ALA MET GLU ASP GLY ILE ASP ASP PHE PHE GLU GLY ILE          
SEQRES   4 I  432  ARG MET ALA LEU ASP PRO LEU VAL THR PHE GLY VAL LYS          
SEQRES   5 I  432  ILE VAL PRO GLU LYS GLU SER GLU LYS SER GLN ASN PHE          
SEQRES   6 I  432  LEU TRP GLU ASP PHE ARG LYS LEU ALA ASN LYS LEU MET          
SEQRES   7 I  432  GLN ARG GLU LEU THR GLY HIS ALA ALA ARG ASP ALA ILE          
SEQRES   8 I  432  LEU THR ALA MET GLU SER ALA THR LYS GLU GLU TRP ASN          
SEQRES   9 I  432  GLY PHE TYR ARG ARG VAL LEU ILE LYS ASP LEU ARG CYS          
SEQRES  10 I  432  GLY VAL SER GLU LYS THR ILE ASN LYS ILE ALA LYS LYS          
SEQRES  11 I  432  PHE PRO LYS TYR ALA ILE PRO ILE PHE SER CYS PRO LEU          
SEQRES  12 I  432  ALA HIS ASP SER ALA ASN HIS GLU LYS LYS MET ILE GLY          
SEQRES  13 I  432  LYS LYS GLN ILE GLU ILE LYS LEU ASP GLY VAL ARG VAL          
SEQRES  14 I  432  LEU THR ILE ILE ARG GLN ASN LYS VAL GLU MET PHE SER          
SEQRES  15 I  432  ARG ASN GLY LYS GLN PHE HIS ASN PHE GLY HIS ILE ILE          
SEQRES  16 I  432  LEU GLU ILE GLU ASN VAL LEU LYS GLU ASP PRO ALA PRO          
SEQRES  17 I  432  TYR ASP LEU VAL LEU ASP GLY GLU VAL MET SER ALA ASN          
SEQRES  18 I  432  PHE GLN ASP LEU MET LYS GLN VAL HIS ARG LYS ASP GLY          
SEQRES  19 I  432  LYS GLN THR LYS ASP ALA VAL LEU HIS LEU PHE ASP LEU          
SEQRES  20 I  432  CYS PRO LEU GLU ASN PHE GLN LYS GLY ARG TRP ASN THR          
SEQRES  21 I  432  LYS GLN THR ALA ARG SER LEU LEU VAL LYS LYS TRP VAL          
SEQRES  22 I  432  ALA LYS HIS SER LEU LEU LEU LYS HIS ILE GLN THR LEU          
SEQRES  23 I  432  GLU TRP GLU ASN VAL ASP LEU ASP THR ILE GLN GLY GLN          
SEQRES  24 I  432  LYS ARG PHE VAL GLU LEU ASN LYS SER ALA VAL GLU GLY          
SEQRES  25 I  432  GLY TYR GLU GLY VAL MET ILE LYS ASP PRO ASP GLY MET          
SEQRES  26 I  432  TYR GLU CYS LYS ARG THR HIS SER TRP LEU LYS ALA LYS          
SEQRES  27 I  432  PRO PHE ILE GLU VAL THR LEU LYS VAL VAL SER VAL GLU          
SEQRES  28 I  432  GLU GLY THR GLY ARG ASN LYS GLY ARG LEU GLY ALA ILE          
SEQRES  29 I  432  LEU VAL GLU GLY GLU ASP ASP GLY TYR GLU TYR SER LEU          
SEQRES  30 I  432  SER CYS GLY SER GLY PHE SER ASP ILE GLN ARG GLU GLU          
SEQRES  31 I  432  TYR TRP SER LYS ARG LYS HIS LEU LEU GLY GLN LEU VAL          
SEQRES  32 I  432  GLU ILE ARG ALA ASP ALA LYS THR LYS SER LYS ASP GLY          
SEQRES  33 I  432  VAL ALA PHE SER LEU ARG PHE PRO ARG PHE LYS CYS PHE          
SEQRES  34 I  432  ARG GLY PHE                                                  
HET    OMC  C  30      34                                                       
HET     MN  C 101       1                                                       
HET    AMP  D 300      34                                                       
HET    SO4  I 501       5                                                       
HETNAM     OMC O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE                             
HETNAM      MN MANGANESE (II) ION                                               
HETNAM     AMP ADENOSINE MONOPHOSPHATE                                          
HETNAM     SO4 SULFATE ION                                                      
FORMUL   2  OMC    C10 H16 N3 O8 P                                              
FORMUL   5   MN    MN 2+                                                        
FORMUL   6  AMP    C10 H14 N5 O7 P                                              
FORMUL   7  SO4    O4 S 2-                                                      
FORMUL   8  HOH   *398(H2 O)                                                    
HELIX    1 AA1 PHE I    7  HIS I   18  1                                  12    
HELIX    2 AA2 SER I   20  ASP I   34  1                                  15    
HELIX    3 AA3 ILE I   36  ASP I   48  1                                  13    
HELIX    4 AA4 LEU I   70  GLN I   83  1                                  14    
HELIX    5 AA5 THR I   87  ALA I  102  1                                  16    
HELIX    6 AA6 THR I  103  PHE I  110  1                                   8    
HELIX    7 AA7 PHE I  110  ILE I  116  1                                   7    
HELIX    8 AA8 SER I  124  ALA I  132  1                                   9    
HELIX    9 AA9 LYS I  133  ALA I  139  5                                   7    
HELIX   10 AB1 ALA I  152  MET I  158  5                                   7    
HELIX   11 AB2 PHE I  195  ASP I  209  1                                  15    
HELIX   12 AB3 ASN I  225  HIS I  234  1                                  10    
HELIX   13 AB4 LEU I  254  GLY I  260  1                                   7    
HELIX   14 AB5 LYS I  265  LYS I  279  1                                  15    
HELIX   15 AB6 THR I  299  GLY I  316  1                                  18    
HELIX   16 AB7 THR I  358  LYS I  362  5                                   5    
HELIX   17 AB8 SER I  388  LYS I  398  1                                  11    
HELIX   18 AB9 LYS I  398  LEU I  403  1                                   6    
SHEET    1 AA1 5 LEU I 147  ASP I 150  0                                        
SHEET    2 AA1 5 ARG I 334  ALA I 341  1  O  TRP I 338   N  HIS I 149           
SHEET    3 AA1 5 GLY I 320  LYS I 324 -1  N  ILE I 323   O  LEU I 339           
SHEET    4 AA1 5 LYS I 161  LYS I 167 -1  N  GLN I 163   O  LYS I 324           
SHEET    5 AA1 5 GLU I 293  ASP I 296 -1  O  VAL I 295   N  LYS I 162           
SHEET    1 AA2 6 GLN I 191  PHE I 192  0                                        
SHEET    2 AA2 6 LYS I 181  PHE I 185 -1  N  MET I 184   O  PHE I 192           
SHEET    3 AA2 6 VAL I 171  ARG I 178 -1  N  ILE I 176   O  GLU I 183           
SHEET    4 AA2 6 LEU I 215  MET I 222 -1  O  LEU I 215   N  ILE I 177           
SHEET    5 AA2 6 VAL I 245  PRO I 253 -1  O  CYS I 252   N  VAL I 216           
SHEET    6 AA2 6 ILE I 287  THR I 289  1  O  GLN I 288   N  LEU I 248           
SHEET    1 AA3 2 ARG I 261  TRP I 262  0                                        
SHEET    2 AA3 2 TYR I 330  GLU I 331 -1  O  TYR I 330   N  TRP I 262           
SHEET    1 AA4 5 TYR I 377  CYS I 383  0                                        
SHEET    2 AA4 5 LEU I 365  ASP I 374 -1  N  GLY I 372   O  TYR I 379           
SHEET    3 AA4 5 ILE I 345  GLU I 356 -1  N  LYS I 350   O  GLU I 371           
SHEET    4 AA4 5 LEU I 406  ALA I 411 -1  O  ALA I 411   N  ILE I 345           
SHEET    5 AA4 5 ARG I 429  PHE I 433 -1  O  ARG I 429   N  ARG I 410           
SHEET    1 AA5 2 ALA I 413  THR I 415  0                                        
SHEET    2 AA5 2 SER I 424  ARG I 426 -1  O  ARG I 426   N  ALA I 413           
LINK         O3'  DC C  29                 P   OMC C  30     1555   1555  1.61  
LINK         O3' OMC C  30                 P    DC C  31     1555   1555  1.61  
LINK         O3'  DC C  31                MN    MN C 101     1555   1555  2.16  
LINK         OP3  DC D  32                MN    MN C 101     1555   1555  2.54  
LINK         OP1  DC D  32                 P   AMP D 300     1555   1555  1.56  
LINK        MN    MN C 101                 O   HOH I 613     1555   1555  2.50  
LINK        MN    MN C 101                 O   HOH I 611     1555   1555  2.33  
LINK        MN    MN C 101                 O   HOH I 680     1555   1555  1.99  
SITE     1 AC1  7  DC C  31   DC D  32  LYS I 167  GLU I 319                    
SITE     2 AC1  7 HOH I 611  HOH I 613  HOH I 680                               
SITE     1 AC2 15  DC D  32  HOH D 403  HOH D 414  GLU I 165                    
SITE     2 AC2 15 ILE I 166  LYS I 167  LEU I 168  ARG I 172                    
SITE     3 AC2 15 GLU I 220  PHE I 249  LEU I 290  MET I 322                    
SITE     4 AC2 15 LYS I 324  LYS I 340  HOH I 613                               
SITE     1 AC3  4 HIS I 149  ASP I 150  ASN I 153  HIS I 154                    
CRYST1   67.304  103.315   68.543  90.00  90.79  90.00 P 1 21 1      2          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.014858  0.000000  0.000204        0.00000                         
SCALE2      0.000000  0.009679  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.014591        0.00000