PDB Short entry for 6SEI HEADER DNA BINDING PROTEIN 30-JUL-19 6SEI TITLE RECOGNITION AND PROCESSING OF BRANCHED DNA SUBSTRATES BY SLX1-SLX4 TITLE 2 NUCLEASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1; COMPND 3 CHAIN: A, C; COMPND 4 EC: 3.1.-.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX4; COMPND 9 CHAIN: B, D; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (32-MER); COMPND 13 CHAIN: E; COMPND 14 ENGINEERED: YES; COMPND 15 OTHER_DETAILS: RANDOM SEQUENCE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THIELAVIA TERRESTRIS; SOURCE 3 ORGANISM_TAXID: 35720; SOURCE 4 GENE: SLX1, THITE_2107775; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: THIELAVIA TERRESTRIS; SOURCE 9 ORGANISM_TAXID: 35720; SOURCE 10 GENE: SLX4, TT172_LOCUS87; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 16 ORGANISM_TAXID: 32630 KEYWDS RESOLVASE, STRUCTURE-SELECTIVE ENDONUCLEASE, ENDONUCLEASE, DNA KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.GAUR,W.ZAJKO,S.NIRWAL,A.SZLACHCIC,M.GAPINSKA,M.NOWOTNY REVDAT 5 24-JAN-24 6SEI 1 LINK REVDAT 4 18-DEC-19 6SEI 1 JRNL REVDAT 3 23-OCT-19 6SEI 1 AUTHOR JRNL REVDAT 2 16-OCT-19 6SEI 1 JRNL REVDAT 1 25-SEP-19 6SEI 0 JRNL AUTH V.GAUR,W.ZIAJKO,S.NIRWAL,A.SZLACHCIC,M.GAPINSKA,M.NOWOTNY JRNL TITL RECOGNITION AND PROCESSING OF BRANCHED DNA SUBSTRATES BY JRNL TITL 2 SLX1-SLX4 NUCLEASE. JRNL REF NUCLEIC ACIDS RES. V. 47 11681 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 31584081 JRNL DOI 10.1093/NAR/GKZ842 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 28286 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1451 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3600 - 5.7900 0.94 2734 144 0.2094 0.2414 REMARK 3 2 5.7900 - 4.6000 0.94 2691 142 0.1803 0.2215 REMARK 3 3 4.6000 - 4.0200 0.94 2689 142 0.1864 0.2532 REMARK 3 4 4.0200 - 3.6500 0.94 2696 141 0.1964 0.2124 REMARK 3 5 3.6500 - 3.3900 0.94 2694 142 0.2137 0.2783 REMARK 3 6 3.3900 - 3.1900 0.94 2648 140 0.2277 0.3038 REMARK 3 7 3.1900 - 3.0300 0.94 2672 140 0.2330 0.3023 REMARK 3 8 3.0300 - 2.9000 0.95 2669 141 0.2369 0.3163 REMARK 3 9 2.9000 - 2.7900 0.94 2720 143 0.2540 0.3399 REMARK 3 10 2.7900 - 2.6900 0.94 2653 140 0.2732 0.3475 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.078 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6482 REMARK 3 ANGLE : 0.637 8934 REMARK 3 CHIRALITY : 0.041 970 REMARK 3 PLANARITY : 0.005 1035 REMARK 3 DIHEDRAL : 14.070 4290 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 27 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.5832 -40.9637 2.9123 REMARK 3 T TENSOR REMARK 3 T11: 0.4348 T22: 0.1358 REMARK 3 T33: 0.0860 T12: -0.0418 REMARK 3 T13: 0.0566 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 2.1815 L22: 0.3656 REMARK 3 L33: 3.3953 L12: -0.3624 REMARK 3 L13: -0.5933 L23: 0.9454 REMARK 3 S TENSOR REMARK 3 S11: -0.0034 S12: -0.0404 S13: -0.1130 REMARK 3 S21: 0.0752 S22: -0.0918 S23: 0.1342 REMARK 3 S31: 0.1443 S32: -0.2576 S33: 0.1283 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -63.8450 -40.4231 9.0086 REMARK 3 T TENSOR REMARK 3 T11: 0.5911 T22: 0.4865 REMARK 3 T33: 0.3596 T12: -0.0158 REMARK 3 T13: 0.0254 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 4.2122 L22: 1.9721 REMARK 3 L33: 5.4724 L12: -0.0363 REMARK 3 L13: -0.2460 L23: 1.5944 REMARK 3 S TENSOR REMARK 3 S11: 0.0787 S12: -0.7773 S13: -0.7493 REMARK 3 S21: 1.0833 S22: -0.1713 S23: 0.0827 REMARK 3 S31: 1.0964 S32: -0.0683 S33: 0.1424 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.7215 -42.7622 5.0788 REMARK 3 T TENSOR REMARK 3 T11: 0.3791 T22: 0.1631 REMARK 3 T33: 0.0922 T12: -0.0366 REMARK 3 T13: 0.0235 T23: -0.0299 REMARK 3 L TENSOR REMARK 3 L11: 0.7470 L22: 0.9787 REMARK 3 L33: 2.0634 L12: 0.1361 REMARK 3 L13: -0.6052 L23: -0.0038 REMARK 3 S TENSOR REMARK 3 S11: 0.0217 S12: -0.1900 S13: -0.0262 REMARK 3 S21: 0.1801 S22: -0.1236 S23: 0.1636 REMARK 3 S31: 0.1252 S32: 0.0944 S33: 0.1317 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.3875 -45.4713 17.1323 REMARK 3 T TENSOR REMARK 3 T11: 0.7537 T22: 0.3767 REMARK 3 T33: 0.1974 T12: -0.0992 REMARK 3 T13: 0.1314 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 2.1549 L22: 1.9739 REMARK 3 L33: 2.2181 L12: -1.8099 REMARK 3 L13: -1.4933 L23: 1.1369 REMARK 3 S TENSOR REMARK 3 S11: -0.1184 S12: 0.2968 S13: -0.2628 REMARK 3 S21: 0.1194 S22: -0.1668 S23: 0.1796 REMARK 3 S31: 0.4353 S32: -0.2828 S33: 0.1312 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.7787 -32.7838 7.3747 REMARK 3 T TENSOR REMARK 3 T11: 0.4816 T22: 0.1430 REMARK 3 T33: 0.0799 T12: -0.0225 REMARK 3 T13: -0.0104 T23: -0.0520 REMARK 3 L TENSOR REMARK 3 L11: 0.2158 L22: 0.2056 REMARK 3 L33: 0.7531 L12: -0.0637 REMARK 3 L13: 0.0938 L23: 0.1382 REMARK 3 S TENSOR REMARK 3 S11: -0.1006 S12: -0.0286 S13: 0.0664 REMARK 3 S21: 0.0591 S22: -0.0073 S23: 0.0022 REMARK 3 S31: -0.0904 S32: -0.0327 S33: -0.2100 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 157 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.3316 -28.0479 -0.3292 REMARK 3 T TENSOR REMARK 3 T11: 0.4930 T22: 0.1981 REMARK 3 T33: 0.0770 T12: -0.0107 REMARK 3 T13: 0.0287 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 1.6831 L22: 1.6758 REMARK 3 L33: 1.8571 L12: 0.0300 REMARK 3 L13: -0.6996 L23: 0.5095 REMARK 3 S TENSOR REMARK 3 S11: -0.0930 S12: 0.1954 S13: 0.2082 REMARK 3 S21: -0.0372 S22: -0.0022 S23: 0.0327 REMARK 3 S31: -0.2275 S32: 0.0721 S33: 0.1353 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.5409 -46.7739 -20.7192 REMARK 3 T TENSOR REMARK 3 T11: 0.4584 T22: 0.2050 REMARK 3 T33: 0.1052 T12: 0.0076 REMARK 3 T13: 0.0015 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 1.3384 L22: 0.3260 REMARK 3 L33: 1.1599 L12: -0.3312 REMARK 3 L13: -0.9068 L23: 0.5698 REMARK 3 S TENSOR REMARK 3 S11: 0.0501 S12: 0.3226 S13: -0.0237 REMARK 3 S21: -0.0401 S22: -0.0986 S23: 0.0734 REMARK 3 S31: -0.0510 S32: -0.2148 S33: 0.0452 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 246 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.5231 -42.6297 -13.0850 REMARK 3 T TENSOR REMARK 3 T11: 0.4826 T22: 0.1077 REMARK 3 T33: 0.0829 T12: -0.0232 REMARK 3 T13: 0.0221 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.3201 L22: 1.3460 REMARK 3 L33: 2.0315 L12: -0.1299 REMARK 3 L13: -0.8314 L23: -0.1052 REMARK 3 S TENSOR REMARK 3 S11: 0.0284 S12: 0.0831 S13: 0.1246 REMARK 3 S21: 0.0020 S22: -0.0496 S23: -0.0450 REMARK 3 S31: -0.3168 S32: 0.0658 S33: -0.0555 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 286 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.2826 -47.9465 -16.3242 REMARK 3 T TENSOR REMARK 3 T11: 0.4808 T22: 0.2058 REMARK 3 T33: 0.0585 T12: -0.0157 REMARK 3 T13: -0.0314 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 1.0758 L22: 0.3807 REMARK 3 L33: 1.9634 L12: -0.1571 REMARK 3 L13: -0.6343 L23: -0.3594 REMARK 3 S TENSOR REMARK 3 S11: 0.0180 S12: 0.2669 S13: -0.0657 REMARK 3 S21: -0.2141 S22: 0.0104 S23: 0.0643 REMARK 3 S31: -0.0391 S32: -0.2909 S33: 0.1053 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 842 THROUGH 861 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6169 -54.2319 8.2852 REMARK 3 T TENSOR REMARK 3 T11: 0.6428 T22: 0.3028 REMARK 3 T33: 0.1912 T12: -0.0388 REMARK 3 T13: -0.1146 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 3.8603 L22: 1.2368 REMARK 3 L33: 1.1896 L12: -0.2728 REMARK 3 L13: -1.0516 L23: 1.1228 REMARK 3 S TENSOR REMARK 3 S11: -0.0800 S12: -0.7751 S13: 0.4162 REMARK 3 S21: 0.3910 S22: 0.0342 S23: -0.3205 REMARK 3 S31: -0.5399 S32: 0.5396 S33: 0.0023 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 862 THROUGH 872 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8528 -60.9006 -12.7073 REMARK 3 T TENSOR REMARK 3 T11: 0.4329 T22: 0.1394 REMARK 3 T33: 0.0898 T12: -0.0536 REMARK 3 T13: -0.0015 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 3.2228 L22: 0.5292 REMARK 3 L33: 4.9300 L12: -0.8956 REMARK 3 L13: 2.8397 L23: 0.0362 REMARK 3 S TENSOR REMARK 3 S11: -0.0223 S12: 0.0119 S13: -0.1207 REMARK 3 S21: -0.1123 S22: 0.0301 S23: 0.0480 REMARK 3 S31: 0.4830 S32: -0.3154 S33: -0.0650 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 873 THROUGH 899 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.0820 -60.1221 -0.3887 REMARK 3 T TENSOR REMARK 3 T11: 0.4382 T22: 0.1541 REMARK 3 T33: 0.0665 T12: 0.0099 REMARK 3 T13: 0.0087 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 0.4469 L22: 0.2255 REMARK 3 L33: 0.5127 L12: -0.2197 REMARK 3 L13: 0.2480 L23: -0.1218 REMARK 3 S TENSOR REMARK 3 S11: -0.0291 S12: -0.0698 S13: -0.0573 REMARK 3 S21: 0.0855 S22: 0.0392 S23: 0.0122 REMARK 3 S31: 0.1487 S32: 0.0014 S33: 0.0283 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 900 THROUGH 925 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.6126 -57.5328 7.7899 REMARK 3 T TENSOR REMARK 3 T11: 0.5695 T22: 0.2265 REMARK 3 T33: 0.1166 T12: 0.0197 REMARK 3 T13: 0.0036 T23: 0.0489 REMARK 3 L TENSOR REMARK 3 L11: 0.7865 L22: 0.0551 REMARK 3 L33: 0.8815 L12: 0.0343 REMARK 3 L13: -0.6737 L23: 0.0977 REMARK 3 S TENSOR REMARK 3 S11: -0.0873 S12: -0.2796 S13: -0.1790 REMARK 3 S21: 0.0273 S22: 0.0860 S23: 0.0143 REMARK 3 S31: 0.3174 S32: 0.0216 S33: -0.0007 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 4 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.7641 1.0605 40.4859 REMARK 3 T TENSOR REMARK 3 T11: 0.5059 T22: 0.1542 REMARK 3 T33: 0.1432 T12: 0.0425 REMARK 3 T13: -0.0175 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 2.0314 L22: 1.6441 REMARK 3 L33: 3.0246 L12: 1.1154 REMARK 3 L13: 0.8087 L23: 2.1110 REMARK 3 S TENSOR REMARK 3 S11: -0.2281 S12: 0.0713 S13: 0.3092 REMARK 3 S21: -0.1669 S22: -0.1282 S23: 0.3628 REMARK 3 S31: -0.3688 S32: -0.3685 S33: 0.3407 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 60 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.7590 2.9321 40.6724 REMARK 3 T TENSOR REMARK 3 T11: 0.4132 T22: 0.1457 REMARK 3 T33: 0.0691 T12: 0.0307 REMARK 3 T13: -0.0030 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.4132 L22: 0.1584 REMARK 3 L33: 1.3415 L12: 0.1448 REMARK 3 L13: 0.4008 L23: 0.1321 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: 0.0728 S13: 0.0005 REMARK 3 S21: -0.0626 S22: -0.0105 S23: 0.0176 REMARK 3 S31: -0.0417 S32: 0.0812 S33: -0.0127 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 84 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.7455 0.0859 35.2214 REMARK 3 T TENSOR REMARK 3 T11: 0.4872 T22: 0.1378 REMARK 3 T33: 0.0618 T12: -0.0309 REMARK 3 T13: 0.0001 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.4936 L22: 0.4250 REMARK 3 L33: 1.2853 L12: 0.1448 REMARK 3 L13: 0.0475 L23: 0.5221 REMARK 3 S TENSOR REMARK 3 S11: -0.0275 S12: 0.0724 S13: 0.0445 REMARK 3 S21: -0.2111 S22: 0.0192 S23: 0.0138 REMARK 3 S31: -0.1698 S32: 0.0323 S33: 0.0686 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 144 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.0996 -10.4621 44.4578 REMARK 3 T TENSOR REMARK 3 T11: 0.4724 T22: 0.1836 REMARK 3 T33: 0.0894 T12: -0.0254 REMARK 3 T13: 0.0296 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 0.5262 L22: 1.9944 REMARK 3 L33: 1.9932 L12: 0.2426 REMARK 3 L13: 0.9156 L23: 1.2110 REMARK 3 S TENSOR REMARK 3 S11: 0.0761 S12: -0.2205 S13: -0.0818 REMARK 3 S21: 0.0945 S22: -0.1370 S23: 0.0204 REMARK 3 S31: 0.2393 S32: -0.0109 S33: -0.0129 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 208 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.3807 4.7092 68.9580 REMARK 3 T TENSOR REMARK 3 T11: 0.4815 T22: 0.3108 REMARK 3 T33: 0.1075 T12: -0.0027 REMARK 3 T13: 0.0338 T23: 0.0501 REMARK 3 L TENSOR REMARK 3 L11: 3.1340 L22: 2.8789 REMARK 3 L33: 3.6289 L12: 1.9605 REMARK 3 L13: 1.5236 L23: 0.3836 REMARK 3 S TENSOR REMARK 3 S11: 0.0517 S12: -0.4679 S13: -0.0392 REMARK 3 S21: 0.1293 S22: -0.2118 S23: 0.0822 REMARK 3 S31: 0.1707 S32: -0.5012 S33: 0.0145 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 223 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.0385 6.3864 64.4714 REMARK 3 T TENSOR REMARK 3 T11: 0.4711 T22: 0.1687 REMARK 3 T33: 0.1194 T12: -0.0305 REMARK 3 T13: 0.0002 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 1.1537 L22: 1.1439 REMARK 3 L33: 2.6961 L12: -0.0994 REMARK 3 L13: 0.6725 L23: 0.4633 REMARK 3 S TENSOR REMARK 3 S11: 0.0792 S12: -0.1446 S13: 0.0069 REMARK 3 S21: 0.1258 S22: -0.0545 S23: 0.0151 REMARK 3 S31: 0.2074 S32: 0.1665 S33: -0.0434 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 286 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.8101 7.8965 61.6920 REMARK 3 T TENSOR REMARK 3 T11: 0.5134 T22: 0.1906 REMARK 3 T33: 0.1159 T12: 0.0111 REMARK 3 T13: 0.0251 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.2262 L22: 1.3108 REMARK 3 L33: 3.2514 L12: 0.6434 REMARK 3 L13: 0.4884 L23: -0.2866 REMARK 3 S TENSOR REMARK 3 S11: 0.0318 S12: -0.1582 S13: 0.1013 REMARK 3 S21: 0.1527 S22: 0.0014 S23: 0.1176 REMARK 3 S31: -0.0103 S32: -0.3560 S33: 0.0146 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 842 THROUGH 860 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.6675 14.2092 38.6334 REMARK 3 T TENSOR REMARK 3 T11: 0.6819 T22: 0.2463 REMARK 3 T33: 0.2354 T12: 0.0396 REMARK 3 T13: 0.1486 T23: -0.0425 REMARK 3 L TENSOR REMARK 3 L11: 3.7029 L22: 0.9975 REMARK 3 L33: 1.3643 L12: 0.1164 REMARK 3 L13: 0.9143 L23: 0.7145 REMARK 3 S TENSOR REMARK 3 S11: -0.0670 S12: 0.5830 S13: -0.4102 REMARK 3 S21: -0.2392 S22: 0.0679 S23: -0.2954 REMARK 3 S31: 0.2619 S32: 0.3278 S33: -0.0992 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 861 THROUGH 872 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0351 20.7854 58.9536 REMARK 3 T TENSOR REMARK 3 T11: 0.4671 T22: 0.0993 REMARK 3 T33: 0.0958 T12: -0.0157 REMARK 3 T13: -0.0143 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 0.9808 L22: 0.0745 REMARK 3 L33: 2.1761 L12: 0.2223 REMARK 3 L13: -1.2289 L23: -0.1542 REMARK 3 S TENSOR REMARK 3 S11: 0.0207 S12: -0.0004 S13: 0.0364 REMARK 3 S21: 0.0731 S22: -0.0142 S23: 0.0238 REMARK 3 S31: -0.2025 S32: -0.0242 S33: -0.0878 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 873 THROUGH 900 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9343 20.2540 47.1303 REMARK 3 T TENSOR REMARK 3 T11: 0.4137 T22: 0.1670 REMARK 3 T33: 0.0914 T12: 0.0134 REMARK 3 T13: 0.0001 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 1.1299 L22: 0.8507 REMARK 3 L33: 0.7173 L12: 0.5381 REMARK 3 L13: -0.4883 L23: -0.2734 REMARK 3 S TENSOR REMARK 3 S11: -0.1001 S12: 0.1133 S13: 0.0669 REMARK 3 S21: -0.0822 S22: 0.0620 S23: 0.0694 REMARK 3 S31: -0.1692 S32: -0.0917 S33: -0.0126 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 901 THROUGH 925 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.8816 17.5431 38.7417 REMARK 3 T TENSOR REMARK 3 T11: 0.5839 T22: 0.2013 REMARK 3 T33: 0.1296 T12: -0.0966 REMARK 3 T13: -0.0090 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.7798 L22: 0.0955 REMARK 3 L33: 1.1355 L12: 0.2415 REMARK 3 L13: 0.4305 L23: 0.2706 REMARK 3 S TENSOR REMARK 3 S11: -0.1874 S12: 0.1756 S13: 0.1772 REMARK 3 S21: -0.1825 S22: 0.1316 S23: -0.0007 REMARK 3 S31: -0.4890 S32: -0.0609 S33: 0.0173 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 2 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -58.2375 -27.9436 26.7578 REMARK 3 T TENSOR REMARK 3 T11: 1.1503 T22: 0.6099 REMARK 3 T33: 0.7942 T12: -0.0497 REMARK 3 T13: 0.1248 T23: 0.0901 REMARK 3 L TENSOR REMARK 3 L11: 3.9541 L22: 3.2386 REMARK 3 L33: 3.1456 L12: 0.8200 REMARK 3 L13: -0.5454 L23: 0.3972 REMARK 3 S TENSOR REMARK 3 S11: -0.1783 S12: -0.6092 S13: -1.1608 REMARK 3 S21: 0.5363 S22: -0.6868 S23: 0.1855 REMARK 3 S31: 0.8458 S32: 0.1267 S33: 0.7111 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 12 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -58.1001 -6.3429 18.4982 REMARK 3 T TENSOR REMARK 3 T11: 0.8982 T22: 0.5216 REMARK 3 T33: 0.4535 T12: 0.0731 REMARK 3 T13: -0.0753 T23: 0.1449 REMARK 3 L TENSOR REMARK 3 L11: 5.3886 L22: 2.8185 REMARK 3 L33: 4.0778 L12: -3.3699 REMARK 3 L13: 2.2750 L23: 0.0669 REMARK 3 S TENSOR REMARK 3 S11: -0.0669 S12: 0.8559 S13: 0.6610 REMARK 3 S21: -0.6199 S22: -0.5188 S23: -0.1109 REMARK 3 S31: -0.0914 S32: 0.2689 S33: 0.5859 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 27 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -61.6318 -30.7244 25.9030 REMARK 3 T TENSOR REMARK 3 T11: 0.9748 T22: 0.6516 REMARK 3 T33: 0.9387 T12: -0.0975 REMARK 3 T13: 0.3288 T23: 0.1441 REMARK 3 L TENSOR REMARK 3 L11: 1.0302 L22: 0.4561 REMARK 3 L33: 4.7062 L12: 0.1530 REMARK 3 L13: -0.3952 L23: 1.3326 REMARK 3 S TENSOR REMARK 3 S11: -0.2196 S12: -0.0761 S13: -0.3315 REMARK 3 S21: 0.2643 S22: -0.1530 S23: -0.1594 REMARK 3 S31: 0.4536 S32: 0.0819 S33: 0.3338 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6SEI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1292103451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28286 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 46.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.490 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.59 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.440 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6SEH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES (PH 6.0), 0.2 M CALCIUM REMARK 280 CHLORIDE DIHYDRATE, AND 20% (V/V) PEG 6000, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.35000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 VAL A 3 REMARK 465 LEU A 97 REMARK 465 THR A 98 REMARK 465 VAL A 99 REMARK 465 ALA A 100 REMARK 465 THR A 101 REMARK 465 GLN A 102 REMARK 465 THR A 103 REMARK 465 LYS A 104 REMARK 465 ALA A 105 REMARK 465 ASN A 106 REMARK 465 GLY A 107 REMARK 465 GLU A 176 REMARK 465 GLY A 177 REMARK 465 LEU A 178 REMARK 465 ALA A 179 REMARK 465 GLY A 180 REMARK 465 ALA A 181 REMARK 465 VAL A 182 REMARK 465 VAL A 183 REMARK 465 GLY A 184 REMARK 465 GLY A 185 REMARK 465 GLU A 186 REMARK 465 GLU A 187 REMARK 465 GLY A 188 REMARK 465 ARG A 189 REMARK 465 GLU A 190 REMARK 465 ARG A 191 REMARK 465 GLY A 192 REMARK 465 GLU A 193 REMARK 465 GLY A 194 REMARK 465 ALA A 195 REMARK 465 GLY A 267 REMARK 465 ALA A 268 REMARK 465 LYS A 313 REMARK 465 ARG A 314 REMARK 465 ARG A 315 REMARK 465 ARG A 316 REMARK 465 ALA A 317 REMARK 465 THR A 318 REMARK 465 LYS A 319 REMARK 465 LYS A 320 REMARK 465 THR A 321 REMARK 465 ALA A 322 REMARK 465 ASN A 323 REMARK 465 ALA A 324 REMARK 465 MET B 833 REMARK 465 GLU B 834 REMARK 465 ASP B 835 REMARK 465 THR B 836 REMARK 465 GLU B 837 REMARK 465 THR B 838 REMARK 465 SER B 839 REMARK 465 LEU B 840 REMARK 465 VAL B 841 REMARK 465 VAL B 926 REMARK 465 SER B 927 REMARK 465 LEU B 928 REMARK 465 ASN B 929 REMARK 465 GLY B 930 REMARK 465 LYS B 931 REMARK 465 GLU B 932 REMARK 465 ARG B 933 REMARK 465 LYS B 934 REMARK 465 ARG B 935 REMARK 465 PHE B 936 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 VAL C 3 REMARK 465 LEU C 97 REMARK 465 THR C 98 REMARK 465 VAL C 99 REMARK 465 ALA C 100 REMARK 465 THR C 101 REMARK 465 GLN C 102 REMARK 465 THR C 103 REMARK 465 LYS C 104 REMARK 465 ALA C 105 REMARK 465 ASN C 106 REMARK 465 GLY C 107 REMARK 465 ARG C 108 REMARK 465 SER C 175 REMARK 465 GLU C 176 REMARK 465 GLY C 177 REMARK 465 LEU C 178 REMARK 465 ALA C 179 REMARK 465 GLY C 180 REMARK 465 ALA C 181 REMARK 465 VAL C 182 REMARK 465 VAL C 183 REMARK 465 GLY C 184 REMARK 465 GLY C 185 REMARK 465 GLU C 186 REMARK 465 GLU C 187 REMARK 465 GLY C 188 REMARK 465 ARG C 189 REMARK 465 GLU C 190 REMARK 465 ARG C 191 REMARK 465 GLY C 192 REMARK 465 GLU C 193 REMARK 465 GLY C 194 REMARK 465 ALA C 195 REMARK 465 PRO C 196 REMARK 465 GLY C 267 REMARK 465 ALA C 268 REMARK 465 GLU C 269 REMARK 465 ALA C 270 REMARK 465 ARG C 312 REMARK 465 LYS C 313 REMARK 465 ARG C 314 REMARK 465 ARG C 315 REMARK 465 ARG C 316 REMARK 465 ALA C 317 REMARK 465 THR C 318 REMARK 465 LYS C 319 REMARK 465 LYS C 320 REMARK 465 THR C 321 REMARK 465 ALA C 322 REMARK 465 ASN C 323 REMARK 465 ALA C 324 REMARK 465 MET D 833 REMARK 465 GLU D 834 REMARK 465 ASP D 835 REMARK 465 THR D 836 REMARK 465 GLU D 837 REMARK 465 THR D 838 REMARK 465 SER D 839 REMARK 465 LEU D 840 REMARK 465 VAL D 841 REMARK 465 VAL D 926 REMARK 465 SER D 927 REMARK 465 LEU D 928 REMARK 465 ASN D 929 REMARK 465 GLY D 930 REMARK 465 LYS D 931 REMARK 465 GLU D 932 REMARK 465 ARG D 933 REMARK 465 LYS D 934 REMARK 465 ARG D 935 REMARK 465 PHE D 936 REMARK 465 DC E 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 4 CG CD OE1 NE2 REMARK 470 LYS A 266 CD CE NZ REMARK 470 GLU A 269 CG CD OE1 OE2 REMARK 470 LYS C 266 CG CD CE NZ REMARK 470 GLN C 277 CG CD OE1 NE2 REMARK 470 LYS C 311 CG CD CE NZ REMARK 470 GLN D 847 CG CD OE1 NE2 REMARK 470 DA E 27 C8 N7 C5 C6 N6 N1 C2 REMARK 470 DA E 27 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC E 8 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 5 -35.10 -132.41 REMARK 500 ASP A 170 78.03 -156.24 REMARK 500 ASP A 206 -159.92 -129.59 REMARK 500 VAL A 231 -62.70 -98.60 REMARK 500 ASP A 271 -5.41 79.82 REMARK 500 VAL A 276 -59.30 -123.52 REMARK 500 SER B 894 32.12 -98.11 REMARK 500 ASP C 170 80.56 -159.36 REMARK 500 ASP C 206 -165.81 -129.21 REMARK 500 VAL C 231 -62.03 -108.23 REMARK 500 VAL C 276 -74.50 -125.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 171 O REMARK 620 2 GLY A 173 O 93.3 REMARK 620 3 HOH A 544 O 78.1 160.4 REMARK 620 4 ASP B 898 OD1 75.5 158.1 2.9 REMARK 620 5 ASP B 903 OD1 75.5 160.6 3.1 3.0 REMARK 620 6 ASP B 903 OD2 75.5 161.7 3.9 4.3 1.3 REMARK 620 7 HOH B1113 O 74.8 157.9 3.5 0.8 2.9 4.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 229 SG REMARK 620 2 CYS A 232 SG 109.0 REMARK 620 3 HIS A 256 ND1 99.5 97.4 REMARK 620 4 CYS A 259 SG 116.5 111.6 120.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 246 SG REMARK 620 2 CYS A 251 SG 108.4 REMARK 620 3 CYS A 280 SG 117.3 117.2 REMARK 620 4 CYS A 283 SG 108.4 98.8 104.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE C 171 O REMARK 620 2 GLY C 173 O 100.2 REMARK 620 3 ASP D 898 OD1 74.7 164.2 REMARK 620 4 ASP D 903 OD1 74.7 168.1 4.2 REMARK 620 5 ASP D 903 OD2 73.6 166.4 3.1 1.8 REMARK 620 6 HOH D1003 O 83.2 147.6 18.9 22.8 21.9 REMARK 620 7 HOH D1004 O 101.7 79.3 116.3 112.0 113.5 131.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 229 SG REMARK 620 2 CYS C 232 SG 105.5 REMARK 620 3 HIS C 256 ND1 101.9 98.9 REMARK 620 4 CYS C 259 SG 115.2 115.9 117.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 246 SG REMARK 620 2 CYS C 251 SG 108.8 REMARK 620 3 CYS C 280 SG 107.8 120.0 REMARK 620 4 CYS C 283 SG 105.8 108.8 104.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 403 DBREF 6SEI A 1 324 UNP G2QV68 G2QV68_THITE 1 324 DBREF1 6SEI B 834 936 UNP A0A3S4CYR8_9PEZI DBREF2 6SEI B A0A3S4CYR8 573 675 DBREF 6SEI C 1 324 UNP G2QV68 G2QV68_THITE 1 324 DBREF1 6SEI D 834 936 UNP A0A3S4CYR8_9PEZI DBREF2 6SEI D A0A3S4CYR8 573 675 DBREF 6SEI E 1 33 PDB 6SEI 6SEI 1 33 SEQADV 6SEI GLN A 79 UNP G2QV68 GLU 79 ENGINEERED MUTATION SEQADV 6SEI MET B 833 UNP A0A3S4CYR INITIATING METHIONINE SEQADV 6SEI GLN C 79 UNP G2QV68 GLU 79 ENGINEERED MUTATION SEQADV 6SEI MET D 833 UNP A0A3S4CYR INITIATING METHIONINE SEQRES 1 A 324 MET THR VAL GLN CYS LYS PRO ILE PRO ALA LEU TYR THR SEQRES 2 A 324 VAL TYR VAL LEU ARG SER THR VAL ARG HIS ALA SER LEU SEQRES 3 A 324 TYR ILE GLY SER THR PRO ASN PRO PRO ARG ARG LEU LYS SEQRES 4 A 324 GLN HIS ASN GLY LEU VAL PRO GLY GLY ALA ALA ARG THR SEQRES 5 A 324 SER ARG SER SER LEU ARG PRO TRP GLU MET VAL ALA LEU SEQRES 6 A 324 VAL SER GLY PHE PRO SER MET VAL ALA ALA LEU LYS PHE SEQRES 7 A 324 GLN TRP ALA LEU THR ASN PRO HIS LEU SER VAL HIS ILE SEQRES 8 A 324 PRO SER ALA SER ARG LEU THR VAL ALA THR GLN THR LYS SEQRES 9 A 324 ALA ASN GLY ARG PRO GLN ARG PRO PRO ARG SER LEU ALA SEQRES 10 A 324 SER VAL VAL ALA ASN LEU HIS LEU LEU LEU ARG VAL PRO SEQRES 11 A 324 SER PHE ALA ARG TRP PRO LEU ARG VAL HIS PHE PHE ARG SEQRES 12 A 324 ARG ASP VAL PHE ALA ALA TRP GLU LYS TRP CYS ALA ALA SEQRES 13 A 324 ALA SER GLU ARG LEU ARG PRO SER LEU ALA VAL VAL THR SEQRES 14 A 324 ASP PHE GLU GLY GLY SER GLU GLY LEU ALA GLY ALA VAL SEQRES 15 A 324 VAL GLY GLY GLU GLU GLY ARG GLU ARG GLY GLU GLY ALA SEQRES 16 A 324 PRO CYS TRP GLY ILE HIS ALA LEU PRO LEU ASP TYR GLU SEQRES 17 A 324 PRO ILE LYS ASP TYR VAL ALA LYS GLY GLN GLU ILE PHE SEQRES 18 A 324 GLU PHE GLU ARG GLN GLY ALA CYS VAL VAL CYS ARG GLU SEQRES 19 A 324 GLU MET ALA SER GLY ASP GLY LEU GLN ALA LEU CYS THR SEQRES 20 A 324 ASN GLN GLY CYS ASP GLY VAL GLY HIS LEU SER CYS TRP SEQRES 21 A 324 SER ARG HIS PHE LEU LYS GLY ALA GLU ALA ASP SER ILE SEQRES 22 A 324 LEU PRO VAL GLN GLY GLN CYS PRO LYS CYS GLY GLY GLU SEQRES 23 A 324 MET GLU TRP GLY ASN MET MET LYS GLU LEU THR LEU ARG SEQRES 24 A 324 THR ARG GLY GLN LYS GLU VAL GLU LYS LEU LEU LYS ARG SEQRES 25 A 324 LYS ARG ARG ARG ALA THR LYS LYS THR ALA ASN ALA SEQRES 1 B 104 MET GLU ASP THR GLU THR SER LEU VAL ALA SER PRO THR SEQRES 2 B 104 ASP GLN GLN VAL SER LEU PHE ARG TYR ILE THR GLN ALA SEQRES 3 B 104 VAL VAL THR ALA PRO ARG ALA LYS ASP PRO ALA ASN PRO SEQRES 4 B 104 SER TRP HIS GLU LYS MET LEU MET TYR ASP PRO ILE ILE SEQRES 5 B 104 LEU GLU ASP LEU THR ALA TRP LEU ASN SER GLY GLN LEU SEQRES 6 B 104 ASP ARG VAL GLY TYR ASP GLY GLU VAL ALA PRO GLY ASP SEQRES 7 B 104 VAL LYS LYS TRP CYS GLU SER LYS SER VAL CYS CYS LEU SEQRES 8 B 104 TRP ARG VAL SER LEU ASN GLY LYS GLU ARG LYS ARG PHE SEQRES 1 C 324 MET THR VAL GLN CYS LYS PRO ILE PRO ALA LEU TYR THR SEQRES 2 C 324 VAL TYR VAL LEU ARG SER THR VAL ARG HIS ALA SER LEU SEQRES 3 C 324 TYR ILE GLY SER THR PRO ASN PRO PRO ARG ARG LEU LYS SEQRES 4 C 324 GLN HIS ASN GLY LEU VAL PRO GLY GLY ALA ALA ARG THR SEQRES 5 C 324 SER ARG SER SER LEU ARG PRO TRP GLU MET VAL ALA LEU SEQRES 6 C 324 VAL SER GLY PHE PRO SER MET VAL ALA ALA LEU LYS PHE SEQRES 7 C 324 GLN TRP ALA LEU THR ASN PRO HIS LEU SER VAL HIS ILE SEQRES 8 C 324 PRO SER ALA SER ARG LEU THR VAL ALA THR GLN THR LYS SEQRES 9 C 324 ALA ASN GLY ARG PRO GLN ARG PRO PRO ARG SER LEU ALA SEQRES 10 C 324 SER VAL VAL ALA ASN LEU HIS LEU LEU LEU ARG VAL PRO SEQRES 11 C 324 SER PHE ALA ARG TRP PRO LEU ARG VAL HIS PHE PHE ARG SEQRES 12 C 324 ARG ASP VAL PHE ALA ALA TRP GLU LYS TRP CYS ALA ALA SEQRES 13 C 324 ALA SER GLU ARG LEU ARG PRO SER LEU ALA VAL VAL THR SEQRES 14 C 324 ASP PHE GLU GLY GLY SER GLU GLY LEU ALA GLY ALA VAL SEQRES 15 C 324 VAL GLY GLY GLU GLU GLY ARG GLU ARG GLY GLU GLY ALA SEQRES 16 C 324 PRO CYS TRP GLY ILE HIS ALA LEU PRO LEU ASP TYR GLU SEQRES 17 C 324 PRO ILE LYS ASP TYR VAL ALA LYS GLY GLN GLU ILE PHE SEQRES 18 C 324 GLU PHE GLU ARG GLN GLY ALA CYS VAL VAL CYS ARG GLU SEQRES 19 C 324 GLU MET ALA SER GLY ASP GLY LEU GLN ALA LEU CYS THR SEQRES 20 C 324 ASN GLN GLY CYS ASP GLY VAL GLY HIS LEU SER CYS TRP SEQRES 21 C 324 SER ARG HIS PHE LEU LYS GLY ALA GLU ALA ASP SER ILE SEQRES 22 C 324 LEU PRO VAL GLN GLY GLN CYS PRO LYS CYS GLY GLY GLU SEQRES 23 C 324 MET GLU TRP GLY ASN MET MET LYS GLU LEU THR LEU ARG SEQRES 24 C 324 THR ARG GLY GLN LYS GLU VAL GLU LYS LEU LEU LYS ARG SEQRES 25 C 324 LYS ARG ARG ARG ALA THR LYS LYS THR ALA ASN ALA SEQRES 1 D 104 MET GLU ASP THR GLU THR SER LEU VAL ALA SER PRO THR SEQRES 2 D 104 ASP GLN GLN VAL SER LEU PHE ARG TYR ILE THR GLN ALA SEQRES 3 D 104 VAL VAL THR ALA PRO ARG ALA LYS ASP PRO ALA ASN PRO SEQRES 4 D 104 SER TRP HIS GLU LYS MET LEU MET TYR ASP PRO ILE ILE SEQRES 5 D 104 LEU GLU ASP LEU THR ALA TRP LEU ASN SER GLY GLN LEU SEQRES 6 D 104 ASP ARG VAL GLY TYR ASP GLY GLU VAL ALA PRO GLY ASP SEQRES 7 D 104 VAL LYS LYS TRP CYS GLU SER LYS SER VAL CYS CYS LEU SEQRES 8 D 104 TRP ARG VAL SER LEU ASN GLY LYS GLU ARG LYS ARG PHE SEQRES 1 E 33 DC DA DA DT DC DG DG DC DA DA DT DG DA SEQRES 2 E 33 DC DC DT DT DT DG DG DT DC DA DT DT DC SEQRES 3 E 33 DA DG DC DA DG DA DT HET ZN A 401 1 HET ZN A 402 1 HET CA B1001 1 HET ZN C 401 1 HET ZN C 402 1 HET CA C 403 1 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION FORMUL 6 ZN 4(ZN 2+) FORMUL 8 CA 2(CA 2+) FORMUL 12 HOH *276(H2 O) HELIX 1 AA1 ASN A 33 ASN A 42 1 10 HELIX 2 AA2 ALA A 50 ARG A 54 5 5 HELIX 3 AA3 SER A 71 ASN A 84 1 14 HELIX 4 AA4 SER A 115 LEU A 127 1 13 HELIX 5 AA5 ARG A 143 ALA A 157 1 15 HELIX 6 AA6 TRP A 198 LEU A 203 5 6 HELIX 7 AA7 TYR A 207 PRO A 209 5 3 HELIX 8 AA8 ILE A 210 PHE A 223 1 14 HELIX 9 AA9 LEU A 257 LEU A 265 1 9 HELIX 10 AB1 TRP A 289 GLY A 302 1 14 HELIX 11 AB2 GLY A 302 LYS A 311 1 10 HELIX 12 AB3 SER B 843 ALA B 862 1 20 HELIX 13 AB4 SER B 872 MET B 879 1 8 HELIX 14 AB5 LEU B 885 ASN B 893 1 9 HELIX 15 AB6 GLY B 895 VAL B 900 1 6 HELIX 16 AB7 ALA B 907 LYS B 918 1 12 HELIX 17 AB8 ASN C 33 ASN C 42 1 10 HELIX 18 AB9 ALA C 50 ARG C 58 5 9 HELIX 19 AC1 SER C 71 ASN C 84 1 14 HELIX 20 AC2 SER C 115 LEU C 127 1 13 HELIX 21 AC3 ARG C 143 ALA C 157 1 15 HELIX 22 AC4 TRP C 198 LEU C 203 5 6 HELIX 23 AC5 TYR C 207 PRO C 209 5 3 HELIX 24 AC6 ILE C 210 PHE C 223 1 14 HELIX 25 AC7 LEU C 257 LEU C 265 1 9 HELIX 26 AC8 TRP C 289 GLY C 302 1 14 HELIX 27 AC9 GLY C 302 LYS C 311 1 10 HELIX 28 AD1 SER D 843 THR D 861 1 19 HELIX 29 AD2 SER D 872 MET D 879 1 8 HELIX 30 AD3 LEU D 885 ASN D 893 1 9 HELIX 31 AD4 GLY D 895 VAL D 900 1 6 HELIX 32 AD5 ALA D 907 LYS D 918 1 12 SHEET 1 AA1 5 LEU A 26 THR A 31 0 SHEET 2 AA1 5 THR A 13 SER A 19 -1 N LEU A 17 O TYR A 27 SHEET 3 AA1 5 TRP A 60 SER A 67 -1 O VAL A 66 N VAL A 14 SHEET 4 AA1 5 ARG A 138 PHE A 141 -1 O HIS A 140 N LEU A 65 SHEET 5 AA1 5 ALA A 166 THR A 169 1 O VAL A 168 N VAL A 139 SHEET 1 AA2 2 GLN A 243 LEU A 245 0 SHEET 2 AA2 2 VAL A 254 HIS A 256 -1 O GLY A 255 N ALA A 244 SHEET 1 AA3 2 GLN A 277 GLN A 279 0 SHEET 2 AA3 2 GLU A 286 GLU A 288 -1 O MET A 287 N GLY A 278 SHEET 1 AA4 2 ILE B 883 ILE B 884 0 SHEET 2 AA4 2 CYS B 922 LEU B 923 1 O LEU B 923 N ILE B 883 SHEET 1 AA5 5 LEU C 26 THR C 31 0 SHEET 2 AA5 5 THR C 13 SER C 19 -1 N LEU C 17 O TYR C 27 SHEET 3 AA5 5 TRP C 60 SER C 67 -1 O VAL C 66 N VAL C 14 SHEET 4 AA5 5 ARG C 138 PHE C 141 -1 O ARG C 138 N SER C 67 SHEET 5 AA5 5 VAL C 167 THR C 169 1 O VAL C 168 N VAL C 139 SHEET 1 AA6 2 GLN C 243 LEU C 245 0 SHEET 2 AA6 2 VAL C 254 HIS C 256 -1 O GLY C 255 N ALA C 244 SHEET 1 AA7 2 GLN C 277 GLN C 279 0 SHEET 2 AA7 2 GLU C 286 GLU C 288 -1 O MET C 287 N GLY C 278 SHEET 1 AA8 2 ILE D 883 ILE D 884 0 SHEET 2 AA8 2 CYS D 922 LEU D 923 1 O LEU D 923 N ILE D 883 LINK O PHE A 171 CA CA B1001 1555 2455 2.44 LINK O GLY A 173 CA CA B1001 1555 2455 2.25 LINK SG CYS A 229 ZN ZN A 401 1555 1555 2.40 LINK SG CYS A 232 ZN ZN A 401 1555 1555 2.29 LINK SG CYS A 246 ZN ZN A 402 1555 1555 2.29 LINK SG CYS A 251 ZN ZN A 402 1555 1555 2.32 LINK ND1 HIS A 256 ZN ZN A 401 1555 1555 2.25 LINK SG CYS A 259 ZN ZN A 401 1555 1555 2.58 LINK SG CYS A 280 ZN ZN A 402 1555 1555 2.35 LINK SG CYS A 283 ZN ZN A 402 1555 1555 2.37 LINK O HOH A 544 CA CA B1001 2445 1555 2.54 LINK OD1 ASP B 898 CA CA B1001 1555 1555 2.59 LINK OD1 ASP B 903 CA CA B1001 1555 1555 2.39 LINK OD2 ASP B 903 CA CA B1001 1555 1555 3.16 LINK CA CA B1001 O HOH B1113 1555 1555 2.34 LINK O PHE C 171 CA CA C 403 1555 1555 2.54 LINK O GLY C 173 CA CA C 403 1555 1555 2.56 LINK SG CYS C 229 ZN ZN C 401 1555 1555 2.46 LINK SG CYS C 232 ZN ZN C 401 1555 1555 2.18 LINK SG CYS C 246 ZN ZN C 402 1555 1555 2.26 LINK SG CYS C 251 ZN ZN C 402 1555 1555 2.46 LINK ND1 HIS C 256 ZN ZN C 401 1555 1555 2.31 LINK SG CYS C 259 ZN ZN C 401 1555 1555 2.35 LINK SG CYS C 280 ZN ZN C 402 1555 1555 2.33 LINK SG CYS C 283 ZN ZN C 402 1555 1555 2.64 LINK CA CA C 403 OD1 ASP D 898 2456 1555 2.39 LINK CA CA C 403 OD1 ASP D 903 2456 1555 3.06 LINK CA CA C 403 OD2 ASP D 903 2456 1555 2.32 LINK CA CA C 403 O HOH D1003 1555 2446 2.28 LINK CA CA C 403 O HOH D1004 1555 2446 2.57 CISPEP 1 ARG A 58 PRO A 59 0 -0.57 CISPEP 2 ARG C 58 PRO C 59 0 2.24 SITE 1 AC1 4 CYS A 229 CYS A 232 HIS A 256 CYS A 259 SITE 1 AC2 4 CYS A 246 CYS A 251 CYS A 280 CYS A 283 SITE 1 AC3 3 ASP B 898 ASP B 903 HOH B1113 SITE 1 AC4 4 CYS C 229 CYS C 232 HIS C 256 CYS C 259 SITE 1 AC5 4 CYS C 246 CYS C 251 CYS C 280 CYS C 283 SITE 1 AC6 2 PHE C 171 GLY C 173 CRYST1 60.075 92.700 93.251 90.00 91.60 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016646 0.000000 0.000466 0.00000 SCALE2 0.000000 0.010787 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010728 0.00000