PDB Short entry for 6VBF HEADER TRANSCRIPTION 18-DEC-19 6VBF TITLE 1.85 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF N-TERMINAL DOMAIN OF TITLE 2 TWO-COMPONENT SYSTEM RESPONSE REGULATOR FROM ACINETOBACTER BAUMANNII COMPND MOL_ID: 1; COMPND 2 MOLECULE: TWO-COMPONENT REGULATORY SYSTEM RESPONSE REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: RSTA, NCTC13305_01717; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: MAGIC; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, TWO-COMPONENT SYSTEM RESPONSE REGULATOR, KEYWDS 3 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,G.WIERSUM,K.J.F.SATCHELL,CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 1 25-DEC-19 6VBF 0 JRNL AUTH G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,G.WIERSUM,K.J.F.SATCHELL, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL 1.85 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF N-TERMINAL JRNL TITL 2 DOMAIN OF TWO-COMPONENT SYSTEM RESPONSE REGULATOR FROM JRNL TITL 3 ACINETOBACTER BAUMANNII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.39 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 25072 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.006 REMARK 3 FREE R VALUE TEST SET COUNT : 1255 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1726 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1908 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 141 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.66200 REMARK 3 B22 (A**2) : 0.66200 REMARK 3 B33 (A**2) : -2.14600 REMARK 3 B12 (A**2) : 0.33100 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.047 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2025 ; 0.005 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2004 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2727 ; 1.424 ; 1.661 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4619 ; 0.380 ; 1.579 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 254 ; 3.546 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;27.862 ;19.839 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 356 ; 9.719 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;11.526 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 262 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2263 ; 0.053 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 416 ; 0.049 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 393 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 40 ; 0.214 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 946 ; 0.156 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 137 ; 0.138 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1014 ; 2.027 ; 2.233 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1003 ; 1.926 ; 2.207 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1258 ; 2.758 ; 3.289 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1259 ; 2.758 ; 3.291 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1011 ; 2.458 ; 2.573 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1012 ; 2.457 ; 2.574 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1469 ; 3.560 ; 3.724 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1470 ; 3.559 ; 3.726 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : AA 6 AA 20 REMARK 3 ORIGIN FOR THE GROUP (A): 27.6546 33.5871 16.8457 REMARK 3 T TENSOR REMARK 3 T11: 0.2121 T22: 0.0639 REMARK 3 T33: 0.0790 T12: 0.1111 REMARK 3 T13: -0.0070 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 5.3203 L22: 2.8176 REMARK 3 L33: 5.8860 L12: -0.1306 REMARK 3 L13: 0.3686 L23: -0.4473 REMARK 3 S TENSOR REMARK 3 S11: -0.0522 S12: 0.0187 S13: -0.2894 REMARK 3 S21: -0.0060 S22: -0.0541 S23: -0.2156 REMARK 3 S31: 0.4502 S32: 0.2039 S33: 0.1063 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : AA 21 AA 33 REMARK 3 ORIGIN FOR THE GROUP (A): 30.5270 35.2768 23.4091 REMARK 3 T TENSOR REMARK 3 T11: 0.1548 T22: 0.0867 REMARK 3 T33: 0.0672 T12: 0.1049 REMARK 3 T13: -0.0351 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 4.4787 L22: 3.3651 REMARK 3 L33: 6.5764 L12: 1.1401 REMARK 3 L13: 1.2017 L23: -1.0497 REMARK 3 S TENSOR REMARK 3 S11: -0.0971 S12: -0.1542 S13: 0.0377 REMARK 3 S21: 0.2838 S22: -0.0187 S23: -0.1997 REMARK 3 S31: 0.2671 S32: 0.3125 S33: 0.1158 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : AA 34 AA 71 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7802 32.2580 7.4192 REMARK 3 T TENSOR REMARK 3 T11: 0.2295 T22: 0.0404 REMARK 3 T33: 0.0315 T12: 0.0684 REMARK 3 T13: 0.0082 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 2.3561 L22: 1.2042 REMARK 3 L33: 3.6116 L12: -0.1044 REMARK 3 L13: 0.8574 L23: 0.5346 REMARK 3 S TENSOR REMARK 3 S11: 0.0718 S12: 0.1455 S13: -0.1214 REMARK 3 S21: -0.1176 S22: 0.0385 S23: -0.0346 REMARK 3 S31: 0.5548 S32: 0.1485 S33: -0.1103 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : AA 72 AA 105 REMARK 3 ORIGIN FOR THE GROUP (A): 20.5059 42.8005 6.1019 REMARK 3 T TENSOR REMARK 3 T11: 0.1189 T22: 0.0382 REMARK 3 T33: 0.0086 T12: 0.0403 REMARK 3 T13: -0.0054 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 2.4314 L22: 1.4569 REMARK 3 L33: 4.3517 L12: 0.0540 REMARK 3 L13: 0.4050 L23: -0.7449 REMARK 3 S TENSOR REMARK 3 S11: 0.0064 S12: 0.1634 S13: -0.0343 REMARK 3 S21: -0.0938 S22: 0.0432 S23: -0.0541 REMARK 3 S31: -0.0857 S32: 0.1056 S33: -0.0496 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : AA 106 AA 125 REMARK 3 ORIGIN FOR THE GROUP (A): 23.4904 44.6655 19.8446 REMARK 3 T TENSOR REMARK 3 T11: 0.1249 T22: 0.0519 REMARK 3 T33: 0.0426 T12: 0.0589 REMARK 3 T13: -0.0234 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 2.3578 L22: 2.6083 REMARK 3 L33: 4.2064 L12: 0.5800 REMARK 3 L13: 0.5727 L23: 0.4890 REMARK 3 S TENSOR REMARK 3 S11: 0.0564 S12: -0.1075 S13: -0.0412 REMARK 3 S21: -0.0247 S22: 0.0174 S23: -0.0652 REMARK 3 S31: 0.0930 S32: 0.2629 S33: -0.0738 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : BB 6 BB 20 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0690 64.1853 11.6272 REMARK 3 T TENSOR REMARK 3 T11: 0.2210 T22: 0.1179 REMARK 3 T33: 0.1792 T12: 0.1155 REMARK 3 T13: -0.0387 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 7.4614 L22: 2.1193 REMARK 3 L33: 4.9438 L12: -0.3886 REMARK 3 L13: 3.4394 L23: -0.0330 REMARK 3 S TENSOR REMARK 3 S11: -0.0785 S12: 0.2245 S13: 0.6151 REMARK 3 S21: 0.2452 S22: -0.1022 S23: 0.1942 REMARK 3 S31: -0.3933 S32: -0.2656 S33: 0.1807 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : BB 21 BB 42 REMARK 3 ORIGIN FOR THE GROUP (A): 8.7000 65.6355 9.9535 REMARK 3 T TENSOR REMARK 3 T11: 0.2167 T22: 0.0721 REMARK 3 T33: 0.0945 T12: 0.1005 REMARK 3 T13: -0.0294 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 2.0674 L22: 2.3230 REMARK 3 L33: 6.8341 L12: -1.8600 REMARK 3 L13: 0.3278 L23: 0.0120 REMARK 3 S TENSOR REMARK 3 S11: 0.0248 S12: 0.1160 S13: 0.2359 REMARK 3 S21: -0.2509 S22: -0.1214 S23: -0.1104 REMARK 3 S31: -0.3644 S32: -0.0882 S33: 0.0966 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : BB 43 BB 88 REMARK 3 ORIGIN FOR THE GROUP (A): 11.2808 59.9713 22.5698 REMARK 3 T TENSOR REMARK 3 T11: 0.2370 T22: 0.1115 REMARK 3 T33: 0.0362 T12: 0.1509 REMARK 3 T13: -0.0259 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 3.6467 L22: 3.2908 REMARK 3 L33: 3.5881 L12: -2.0812 REMARK 3 L13: 0.1792 L23: -0.4837 REMARK 3 S TENSOR REMARK 3 S11: -0.3407 S12: -0.3913 S13: 0.1207 REMARK 3 S21: 0.4509 S22: 0.2912 S23: -0.0476 REMARK 3 S31: -0.4750 S32: -0.2633 S33: 0.0495 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : BB 89 BB 109 REMARK 3 ORIGIN FOR THE GROUP (A): 22.3369 55.2130 20.6785 REMARK 3 T TENSOR REMARK 3 T11: 0.1547 T22: 0.0643 REMARK 3 T33: 0.0643 T12: 0.0387 REMARK 3 T13: -0.0017 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 2.8687 L22: 1.1883 REMARK 3 L33: 4.4486 L12: -0.3065 REMARK 3 L13: 2.0415 L23: -1.5805 REMARK 3 S TENSOR REMARK 3 S11: -0.0141 S12: 0.0204 S13: 0.2268 REMARK 3 S21: 0.1360 S22: -0.1266 S23: -0.0455 REMARK 3 S31: -0.3269 S32: 0.2919 S33: 0.1408 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : BB 110 BB 125 REMARK 3 ORIGIN FOR THE GROUP (A): 13.5439 52.1261 7.8445 REMARK 3 T TENSOR REMARK 3 T11: 0.1080 T22: 0.0451 REMARK 3 T33: 0.0292 T12: 0.0649 REMARK 3 T13: -0.0120 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 3.4090 L22: 8.1723 REMARK 3 L33: 2.4158 L12: 0.5799 REMARK 3 L13: -0.5056 L23: -0.6659 REMARK 3 S TENSOR REMARK 3 S11: 0.0690 S12: 0.1726 S13: 0.0300 REMARK 3 S21: -0.3262 S22: -0.1018 S23: 0.1859 REMARK 3 S31: -0.2554 S32: -0.1555 S33: 0.0328 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 6VBF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1000246130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : BE REMARK 200 OPTICS : C(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25198 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : 0.07100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.77600 REMARK 200 R SYM FOR SHELL (I) : 0.77600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 7.6 MG/ML, 0.01M TRIS PH 8.3; REMARK 280 SCREEN: PEGS II (H8), 0.2M CALCIUM ACETATE, 0.1M HEPES PH 7.5, REMARK 280 10% (W/V) PEG 8000. CRYO: 0.2M CALCIUM CHLORIDE, 0.1M HEPES PH REMARK 280 7.5, 30 %(W/V) PEG 4000., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 129.66933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.83467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 97.25200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.41733 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 162.08667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -25.90950 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 44.87657 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 32.41733 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 ASN A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 GLU A 4 REMARK 465 GLU A 5 REMARK 465 SER B 0 REMARK 465 ASN B 1 REMARK 465 ALA B 2 REMARK 465 GLN B 3 REMARK 465 GLU B 4 REMARK 465 GLU B 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 87 108.81 -162.21 REMARK 500 MSE A 91 -1.75 73.63 REMARK 500 MSE A 91 -1.75 73.75 REMARK 500 ARG B 124 53.18 -109.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 15 OD1 REMARK 620 2 ASP A 58 OD2 87.5 REMARK 620 3 MSE A 60 O 94.0 83.8 REMARK 620 4 HOH A 328 O 82.6 164.5 85.0 REMARK 620 5 HOH A 310 O 86.3 68.1 151.9 122.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 61 O REMARK 620 2 GLY A 63 O 78.5 REMARK 620 3 HOH A 355 O 155.9 80.6 REMARK 620 4 HOH A 335 O 72.4 103.7 101.3 REMARK 620 5 HOH A 308 O 105.0 167.8 97.9 88.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 15 OD1 REMARK 620 2 ASP B 15 OD2 44.5 REMARK 620 3 ASP B 58 OD2 80.7 122.6 REMARK 620 4 MSE B 60 O 103.1 89.6 87.6 REMARK 620 5 HOH B 304 O 65.0 94.2 70.7 156.3 REMARK 620 6 HOH B 352 O 150.5 137.3 97.9 106.3 86.5 REMARK 620 7 HOH B 312 O 95.3 54.3 175.1 96.0 105.2 84.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 61 O REMARK 620 2 GLY B 63 O 80.8 REMARK 620 3 ASP B 65 OD1 79.4 92.8 REMARK 620 4 HOH B 328 O 73.2 153.4 87.8 REMARK 620 5 HOH B 357 O 115.2 102.5 160.2 84.2 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP95894 RELATED DB: TARGETTRACK DBREF1 6VBF A 3 125 UNP A0A380UY17_ACIBA DBREF2 6VBF A A0A380UY17 3 125 DBREF1 6VBF B 3 125 UNP A0A380UY17_ACIBA DBREF2 6VBF B A0A380UY17 3 125 SEQADV 6VBF SER A 0 UNP A0A380UY1 EXPRESSION TAG SEQADV 6VBF ASN A 1 UNP A0A380UY1 EXPRESSION TAG SEQADV 6VBF ALA A 2 UNP A0A380UY1 EXPRESSION TAG SEQADV 6VBF SER B 0 UNP A0A380UY1 EXPRESSION TAG SEQADV 6VBF ASN B 1 UNP A0A380UY1 EXPRESSION TAG SEQADV 6VBF ALA B 2 UNP A0A380UY1 EXPRESSION TAG SEQRES 1 A 126 SER ASN ALA GLN GLU GLU LYS LEU PRO LYS ILE LEU ILE SEQRES 2 A 126 VAL GLU ASP ASP GLU ARG LEU ALA ARG LEU THR GLN GLU SEQRES 3 A 126 TYR LEU ILE ARG ASN GLY LEU GLU VAL GLY VAL GLU THR SEQRES 4 A 126 ASP GLY ASN ARG ALA ILE ARG ARG ILE ILE SER GLU GLN SEQRES 5 A 126 PRO ASP LEU VAL VAL LEU ASP VAL MSE LEU PRO GLY ALA SEQRES 6 A 126 ASP GLY LEU THR VAL CYS ARG GLU VAL ARG PRO HIS TYR SEQRES 7 A 126 HIS GLN PRO ILE LEU MSE LEU THR ALA ARG THR GLU ASP SEQRES 8 A 126 MSE ASP GLN VAL LEU GLY LEU GLU MSE GLY ALA ASP ASP SEQRES 9 A 126 TYR VAL ALA LYS PRO VAL GLN PRO ARG VAL LEU LEU ALA SEQRES 10 A 126 ARG ILE ARG ALA LEU LEU ARG ARG THR SEQRES 1 B 126 SER ASN ALA GLN GLU GLU LYS LEU PRO LYS ILE LEU ILE SEQRES 2 B 126 VAL GLU ASP ASP GLU ARG LEU ALA ARG LEU THR GLN GLU SEQRES 3 B 126 TYR LEU ILE ARG ASN GLY LEU GLU VAL GLY VAL GLU THR SEQRES 4 B 126 ASP GLY ASN ARG ALA ILE ARG ARG ILE ILE SER GLU GLN SEQRES 5 B 126 PRO ASP LEU VAL VAL LEU ASP VAL MSE LEU PRO GLY ALA SEQRES 6 B 126 ASP GLY LEU THR VAL CYS ARG GLU VAL ARG PRO HIS TYR SEQRES 7 B 126 HIS GLN PRO ILE LEU MSE LEU THR ALA ARG THR GLU ASP SEQRES 8 B 126 MSE ASP GLN VAL LEU GLY LEU GLU MSE GLY ALA ASP ASP SEQRES 9 B 126 TYR VAL ALA LYS PRO VAL GLN PRO ARG VAL LEU LEU ALA SEQRES 10 B 126 ARG ILE ARG ALA LEU LEU ARG ARG THR MODRES 6VBF MSE A 60 MET MODIFIED RESIDUE MODRES 6VBF MSE A 83 MET MODIFIED RESIDUE MODRES 6VBF MSE A 91 MET MODIFIED RESIDUE MODRES 6VBF MSE A 99 MET MODIFIED RESIDUE MODRES 6VBF MSE B 60 MET MODIFIED RESIDUE MODRES 6VBF MSE B 83 MET MODIFIED RESIDUE MODRES 6VBF MSE B 91 MET MODIFIED RESIDUE MODRES 6VBF MSE B 99 MET MODIFIED RESIDUE HET MSE A 60 8 HET MSE A 83 8 HET MSE A 91 8 HET MSE A 99 8 HET MSE B 60 8 HET MSE B 83 8 HET MSE B 91 8 HET MSE B 99 8 HET CA A 201 1 HET CA A 202 1 HET CL B 201 1 HET CA B 202 1 HET CA B 203 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 CA 4(CA 2+) FORMUL 5 CL CL 1- FORMUL 8 HOH *141(H2 O) HELIX 1 AA1 ASP A 16 ASN A 30 1 15 HELIX 2 AA2 ASP A 39 GLN A 51 1 13 HELIX 3 AA3 ASP A 65 ARG A 74 1 10 HELIX 4 AA4 MSE A 91 MSE A 99 1 9 HELIX 5 AA5 GLN A 110 ARG A 124 1 15 HELIX 6 AA6 ASP B 16 ARG B 29 1 14 HELIX 7 AA7 ASP B 39 GLN B 51 1 13 HELIX 8 AA8 ASP B 65 ARG B 74 1 10 HELIX 9 AA9 GLU B 89 GLY B 100 1 12 HELIX 10 AB1 GLN B 110 ARG B 124 1 15 SHEET 1 AA1 5 GLU A 33 GLU A 37 0 SHEET 2 AA1 5 LYS A 9 VAL A 13 1 N ILE A 10 O GLU A 33 SHEET 3 AA1 5 LEU A 54 ASP A 58 1 O VAL A 56 N VAL A 13 SHEET 4 AA1 5 ILE A 81 THR A 85 1 O LEU A 82 N VAL A 55 SHEET 5 AA1 5 ASP A 103 ALA A 106 1 O VAL A 105 N MSE A 83 SHEET 1 AA2 5 GLU B 33 GLU B 37 0 SHEET 2 AA2 5 LYS B 9 VAL B 13 1 N ILE B 10 O GLU B 33 SHEET 3 AA2 5 LEU B 54 ASP B 58 1 O VAL B 56 N VAL B 13 SHEET 4 AA2 5 ILE B 81 THR B 85 1 O LEU B 82 N VAL B 55 SHEET 5 AA2 5 ASP B 103 ALA B 106 1 O VAL B 105 N MSE B 83 LINK OD1 ASP A 15 CA CA A 201 1555 1555 2.33 LINK OD2 ASP A 58 CA CA A 201 1555 1555 2.34 LINK C VAL A 59 N MSE A 60 1555 1555 1.34 LINK C MSE A 60 N LEU A 61 1555 1555 1.34 LINK O MSE A 60 CA CA A 201 1555 1555 2.37 LINK O LEU A 61 CA CA A 202 1555 1555 2.33 LINK O GLY A 63 CA CA A 202 1555 1555 2.36 LINK C LEU A 82 N MSE A 83 1555 1555 1.34 LINK C MSE A 83 N LEU A 84 1555 1555 1.34 LINK C AASP A 90 N MSE A 91 1555 1555 1.35 LINK C BASP A 90 N MSE A 91 1555 1555 1.34 LINK C MSE A 91 N ASP A 92 1555 1555 1.34 LINK C GLU A 98 N MSE A 99 1555 1555 1.34 LINK C MSE A 99 N GLY A 100 1555 1555 1.34 LINK OD1 ASP B 15 CA CA B 202 1555 1555 2.35 LINK OD2 ASP B 15 CA CA B 202 1555 1555 3.14 LINK OD2 ASP B 58 CA CA B 202 1555 1555 2.34 LINK C VAL B 59 N MSE B 60 1555 1555 1.34 LINK C MSE B 60 N LEU B 61 1555 1555 1.34 LINK O MSE B 60 CA CA B 202 1555 1555 2.35 LINK O LEU B 61 CA CA B 203 1555 1555 2.34 LINK O GLY B 63 CA CA B 203 1555 1555 2.35 LINK OD1 ASP B 65 CA CA B 203 1555 1555 2.35 LINK C LEU B 82 N MSE B 83 1555 1555 1.34 LINK C MSE B 83 N LEU B 84 1555 1555 1.35 LINK C ASP B 90 N MSE B 91 1555 1555 1.34 LINK C MSE B 91 N ASP B 92 1555 1555 1.34 LINK C GLU B 98 N MSE B 99 1555 1555 1.34 LINK C MSE B 99 N GLY B 100 1555 1555 1.34 LINK CA CA A 201 O HOH A 328 1555 1555 2.35 LINK CA CA A 201 O HOH A 310 1555 1555 2.35 LINK CA CA A 202 O HOH A 355 1555 1555 2.35 LINK CA CA A 202 O HOH A 335 1555 1555 2.36 LINK CA CA B 202 O HOH B 304 1555 1555 2.35 LINK CA CA B 202 O HOH B 352 1555 1555 2.35 LINK CA CA B 202 O HOH B 312 1555 1555 2.35 LINK CA CA B 203 O HOH B 328 1555 1555 2.35 LINK CA CA B 203 O HOH B 357 1555 1555 2.35 LINK CA CA A 202 O HOH A 308 1555 6654 2.35 CISPEP 1 LYS A 107 PRO A 108 0 0.25 CISPEP 2 LYS B 107 PRO B 108 0 -0.86 CRYST1 51.819 51.819 194.504 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019298 0.011142 0.000000 0.00000 SCALE2 0.000000 0.022283 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005141 0.00000