PDB Short entry for 6XAF HEADER HYDROLASE 04-JUN-20 6XAF TITLE 1.9A CRYSTAL STRUCTURE OF THE GTPASE DOMAIN OF PARKINSON'S DISEASE- TITLE 2 ASSOCIATED PROTEIN LRRK2 CARRYING R1398H COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: GTPASE DOMAIN (UNP RESIDUES 1329-1520); COMPND 5 SYNONYM: DARDARIN; COMPND 6 EC: 2.7.11.1,3.6.5.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LRRK2, PARK8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETDUET1 KEYWDS PARKINSON'S DISEASE, LRRK2, GTPASE, DIMER, INTERSWITCH, COMPLEX, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.Q.HOANG,J.LIAO,X.HUANG,Y.PARK,C.X.WU REVDAT 2 18-OCT-23 6XAF 1 REMARK REVDAT 1 09-JUN-21 6XAF 0 JRNL AUTH C.X.WU,J.LIAO,Y.PARK,N.C.HOANG,V.A.ENGEL,R.SANISHVILI, JRNL AUTH 2 Y.TAKAGI,S.M.JOHNSON,M.WANG,M.FEDERICI,R.J.NICHOLS, JRNL AUTH 3 M.R.COOKSON,Q.Q.HOANG JRNL TITL STRUCTURAL BASIS FOR CONFORMATIONAL PLASTICITY IN THE GTPASE JRNL TITL 2 DOMAIN OF THE PARKINSON'S DISEASE-ASSOCIATED PROTEIN LRRK2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 27380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.0480 - 4.7227 0.99 1834 149 0.1815 0.2171 REMARK 3 2 4.7227 - 3.7566 1.00 1810 143 0.1527 0.1713 REMARK 3 3 3.7566 - 3.2841 1.00 1834 146 0.1737 0.2104 REMARK 3 4 3.2841 - 2.9849 1.00 1807 144 0.1911 0.2437 REMARK 3 5 2.9849 - 2.7716 1.00 1821 144 0.1976 0.2256 REMARK 3 6 2.7716 - 2.6085 1.00 1831 143 0.2026 0.2654 REMARK 3 7 2.6085 - 2.4781 1.00 1805 144 0.1832 0.2428 REMARK 3 8 2.4781 - 2.3704 1.00 1836 141 0.1821 0.2314 REMARK 3 9 2.3704 - 2.2793 1.00 1823 144 0.1740 0.2452 REMARK 3 10 2.2793 - 2.2008 1.00 1820 144 0.1808 0.2185 REMARK 3 11 2.2008 - 2.1320 1.00 1787 139 0.2012 0.2591 REMARK 3 12 2.1320 - 2.0711 1.00 1842 147 0.1945 0.2470 REMARK 3 13 2.0711 - 2.0167 0.99 1778 133 0.1971 0.2561 REMARK 3 14 2.0167 - 1.9680 0.95 1754 137 0.1968 0.2513 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.64 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 10.0919 -5.4809 9.5039 REMARK 3 T TENSOR REMARK 3 T11: 0.2270 T22: 0.1809 REMARK 3 T33: 0.2086 T12: 0.0258 REMARK 3 T13: -0.0273 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 2.4513 L22: 1.0303 REMARK 3 L33: 1.9019 L12: 0.7327 REMARK 3 L13: -1.0519 L23: -0.6779 REMARK 3 S TENSOR REMARK 3 S11: 0.0081 S12: 0.1244 S13: 0.1014 REMARK 3 S21: -0.0031 S22: 0.0114 S23: 0.0007 REMARK 3 S31: -0.0103 S32: -0.1254 S33: -0.0116 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XAF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000247893. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27384 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 20.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.6400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 6OJF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM POTASSIUM THIOCYANATE, 25% REMARK 280 PEG2000 MME, 0.1 M BIS-TRIS, PH 6.5, MICROBATCH, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.89250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1315 REMARK 465 GLY A 1316 REMARK 465 SER A 1317 REMARK 465 SER A 1318 REMARK 465 HIS A 1319 REMARK 465 HIS A 1320 REMARK 465 HIS A 1321 REMARK 465 HIS A 1322 REMARK 465 HIS A 1323 REMARK 465 HIS A 1324 REMARK 465 SER A 1325 REMARK 465 GLN A 1326 REMARK 465 ASP A 1327 REMARK 465 PRO A 1328 REMARK 465 ALA A 1329 REMARK 465 VAL A 1330 REMARK 465 PRO A 1331 REMARK 465 TYR A 1332 REMARK 465 ASN A 1333 REMARK 465 ARG A 1334 REMARK 465 THR A 1357 REMARK 465 LYS A 1358 REMARK 465 LYS A 1359 REMARK 465 SER A 1360 REMARK 465 ASP A 1361 REMARK 465 LEU A 1362 REMARK 465 GLY A 1363 REMARK 465 MET A 1364 REMARK 465 ASP A 1515 REMARK 465 GLN A 1516 REMARK 465 LEU A 1517 REMARK 465 VAL A 1518 REMARK 465 VAL A 1519 REMARK 465 GLY A 1520 REMARK 465 MET B 1315 REMARK 465 GLY B 1316 REMARK 465 SER B 1317 REMARK 465 SER B 1318 REMARK 465 HIS B 1319 REMARK 465 HIS B 1320 REMARK 465 HIS B 1321 REMARK 465 HIS B 1322 REMARK 465 HIS B 1323 REMARK 465 HIS B 1324 REMARK 465 SER B 1325 REMARK 465 GLN B 1326 REMARK 465 ASP B 1327 REMARK 465 PRO B 1328 REMARK 465 ALA B 1329 REMARK 465 VAL B 1330 REMARK 465 PRO B 1331 REMARK 465 TYR B 1332 REMARK 465 ASN B 1333 REMARK 465 THR B 1357 REMARK 465 LYS B 1358 REMARK 465 LYS B 1359 REMARK 465 SER B 1360 REMARK 465 ASP B 1361 REMARK 465 LEU B 1362 REMARK 465 GLY B 1363 REMARK 465 MET B 1364 REMARK 465 GLN B 1516 REMARK 465 LEU B 1517 REMARK 465 VAL B 1518 REMARK 465 VAL B 1519 REMARK 465 GLY B 1520 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A1335 CG SD CE REMARK 470 GLN A1352 CG CD OE1 NE2 REMARK 470 GLN A1379 CG CD OE1 NE2 REMARK 470 ARG A1381 CG CD NE CZ NH1 NH2 REMARK 470 ASP A1382 CG OD1 OD2 REMARK 470 LYS A1383 CG CD CE NZ REMARK 470 ARG A1384 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1385 CG CD CE NZ REMARK 470 ARG A1386 CG CD NE CZ NH1 NH2 REMARK 470 GLN A1411 CG CD OE1 NE2 REMARK 470 ARG A1412 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1502 CG CD CE NZ REMARK 470 ARG A1514 CG CD NE CZ NH1 NH2 REMARK 470 ARG B1334 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1383 CG CD CE NZ REMARK 470 ARG B1384 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1385 CG CD CE NZ REMARK 470 ASP B1515 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A1381 57.05 -157.28 REMARK 500 ASP A1382 -60.33 -105.95 REMARK 500 ARG A1384 -131.19 -164.19 REMARK 500 LYS A1385 87.12 -171.12 REMARK 500 ARG A1386 -131.65 -120.22 REMARK 500 LYS B1383 -159.15 -71.48 REMARK 500 ARG B1384 14.26 57.60 REMARK 500 LYS B1385 77.66 -162.03 REMARK 500 ASN B1475 66.12 34.84 REMARK 500 LYS B1512 31.01 -67.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1766 DISTANCE = 5.85 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A1348 OG1 REMARK 620 2 GDP A1602 O3B 95.3 REMARK 620 3 HOH A1713 O 175.4 89.2 REMARK 620 4 HOH A1720 O 92.6 90.8 88.3 REMARK 620 5 HOH A1741 O 87.2 177.5 88.3 89.3 REMARK 620 6 HOH B1707 O 88.6 88.0 90.6 178.4 91.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1704 O REMARK 620 2 THR B1348 OG1 89.4 REMARK 620 3 GDP B1602 O1B 90.7 90.5 REMARK 620 4 HOH B1721 O 179.4 90.9 88.8 REMARK 620 5 HOH B1725 O 88.6 177.4 91.1 91.2 REMARK 620 6 HOH B1745 O 90.5 92.4 176.9 90.1 86.0 REMARK 620 N 1 2 3 4 5 DBREF 6XAF A 1329 1520 UNP Q5S007 LRRK2_HUMAN 1329 1520 DBREF 6XAF B 1329 1520 UNP Q5S007 LRRK2_HUMAN 1329 1520 SEQADV 6XAF MET A 1315 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF GLY A 1316 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF SER A 1317 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF SER A 1318 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS A 1319 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS A 1320 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS A 1321 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS A 1322 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS A 1323 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS A 1324 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF SER A 1325 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF GLN A 1326 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF ASP A 1327 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF PRO A 1328 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS A 1398 UNP Q5S007 ARG 1398 ENGINEERED MUTATION SEQADV 6XAF ALA A 1460 UNP Q5S007 LYS 1460 ENGINEERED MUTATION SEQADV 6XAF ALA A 1463 UNP Q5S007 LYS 1463 ENGINEERED MUTATION SEQADV 6XAF MET B 1315 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF GLY B 1316 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF SER B 1317 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF SER B 1318 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS B 1319 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS B 1320 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS B 1321 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS B 1322 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS B 1323 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS B 1324 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF SER B 1325 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF GLN B 1326 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF ASP B 1327 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF PRO B 1328 UNP Q5S007 EXPRESSION TAG SEQADV 6XAF HIS B 1398 UNP Q5S007 ARG 1398 ENGINEERED MUTATION SEQADV 6XAF ALA B 1460 UNP Q5S007 LYS 1460 ENGINEERED MUTATION SEQADV 6XAF ALA B 1463 UNP Q5S007 LYS 1463 ENGINEERED MUTATION SEQRES 1 A 206 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 206 PRO ALA VAL PRO TYR ASN ARG MET LYS LEU MET ILE VAL SEQRES 3 A 206 GLY ASN THR GLY SER GLY LYS THR THR LEU LEU GLN GLN SEQRES 4 A 206 LEU MET LYS THR LYS LYS SER ASP LEU GLY MET GLN SER SEQRES 5 A 206 ALA THR VAL GLY ILE ASP VAL LYS ASP TRP PRO ILE GLN SEQRES 6 A 206 ILE ARG ASP LYS ARG LYS ARG ASP LEU VAL LEU ASN VAL SEQRES 7 A 206 TRP ASP PHE ALA GLY HIS GLU GLU PHE TYR SER THR HIS SEQRES 8 A 206 PRO HIS PHE MET THR GLN ARG ALA LEU TYR LEU ALA VAL SEQRES 9 A 206 TYR ASP LEU SER LYS GLY GLN ALA GLU VAL ASP ALA MET SEQRES 10 A 206 LYS PRO TRP LEU PHE ASN ILE LYS ALA ARG ALA SER SER SEQRES 11 A 206 SER PRO VAL ILE LEU VAL GLY THR HIS LEU ASP VAL SER SEQRES 12 A 206 ASP GLU ALA GLN ARG ALA ALA CYS MET SER LYS ILE THR SEQRES 13 A 206 LYS GLU LEU LEU ASN LYS ARG GLY PHE PRO ALA ILE ARG SEQRES 14 A 206 ASP TYR HIS PHE VAL ASN ALA THR GLU GLU SER ASP ALA SEQRES 15 A 206 LEU ALA LYS LEU ARG LYS THR ILE ILE ASN GLU SER LEU SEQRES 16 A 206 ASN PHE LYS ILE ARG ASP GLN LEU VAL VAL GLY SEQRES 1 B 206 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 B 206 PRO ALA VAL PRO TYR ASN ARG MET LYS LEU MET ILE VAL SEQRES 3 B 206 GLY ASN THR GLY SER GLY LYS THR THR LEU LEU GLN GLN SEQRES 4 B 206 LEU MET LYS THR LYS LYS SER ASP LEU GLY MET GLN SER SEQRES 5 B 206 ALA THR VAL GLY ILE ASP VAL LYS ASP TRP PRO ILE GLN SEQRES 6 B 206 ILE ARG ASP LYS ARG LYS ARG ASP LEU VAL LEU ASN VAL SEQRES 7 B 206 TRP ASP PHE ALA GLY HIS GLU GLU PHE TYR SER THR HIS SEQRES 8 B 206 PRO HIS PHE MET THR GLN ARG ALA LEU TYR LEU ALA VAL SEQRES 9 B 206 TYR ASP LEU SER LYS GLY GLN ALA GLU VAL ASP ALA MET SEQRES 10 B 206 LYS PRO TRP LEU PHE ASN ILE LYS ALA ARG ALA SER SER SEQRES 11 B 206 SER PRO VAL ILE LEU VAL GLY THR HIS LEU ASP VAL SER SEQRES 12 B 206 ASP GLU ALA GLN ARG ALA ALA CYS MET SER LYS ILE THR SEQRES 13 B 206 LYS GLU LEU LEU ASN LYS ARG GLY PHE PRO ALA ILE ARG SEQRES 14 B 206 ASP TYR HIS PHE VAL ASN ALA THR GLU GLU SER ASP ALA SEQRES 15 B 206 LEU ALA LYS LEU ARG LYS THR ILE ILE ASN GLU SER LEU SEQRES 16 B 206 ASN PHE LYS ILE ARG ASP GLN LEU VAL VAL GLY HET MG A1601 1 HET GDP A1602 28 HET MG B1601 1 HET GDP B1602 28 HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 3 MG 2(MG 2+) FORMUL 4 GDP 2(C10 H15 N5 O11 P2) FORMUL 7 HOH *134(H2 O) HELIX 1 AA1 GLY A 1346 MET A 1355 1 10 HELIX 2 AA2 GLY A 1397 SER A 1403 1 7 HELIX 3 AA3 HIS A 1405 GLN A 1411 1 7 HELIX 4 AA4 GLY A 1424 ALA A 1442 1 19 HELIX 5 AA5 HIS A 1453 SER A 1457 5 5 HELIX 6 AA6 ASP A 1458 LEU A 1473 1 16 HELIX 7 AA7 SER A 1494 ARG A 1514 1 21 HELIX 8 AA8 GLY B 1346 MET B 1355 1 10 HELIX 9 AA9 GLY B 1397 SER B 1403 1 7 HELIX 10 AB1 HIS B 1405 ARG B 1412 1 8 HELIX 11 AB2 GLY B 1424 ALA B 1430 1 7 HELIX 12 AB3 ALA B 1430 ALA B 1442 1 13 HELIX 13 AB4 HIS B 1453 SER B 1457 5 5 HELIX 14 AB5 ASP B 1458 LEU B 1473 1 16 HELIX 15 AB6 SER B 1494 ASN B 1510 1 17 SHEET 1 AA1 6 ILE A1482 PHE A1487 0 SHEET 2 AA1 6 VAL A1447 THR A1452 1 N GLY A1451 O HIS A1486 SHEET 3 AA1 6 ALA A1413 ASP A1420 1 N TYR A1419 O THR A1452 SHEET 4 AA1 6 LYS A1336 GLY A1341 1 N MET A1338 O LEU A1414 SHEET 5 AA1 6 VAL B1389 PHE B1395 1 O TRP B1393 N ILE A1339 SHEET 6 AA1 6 ILE B1371 PRO B1377 -1 N LYS B1374 O VAL B1392 SHEET 1 AA2 6 ILE A1371 GLN A1379 0 SHEET 2 AA2 6 ASP A1387 PHE A1395 -1 O LEU A1388 N ILE A1378 SHEET 3 AA2 6 LYS B1336 GLY B1341 1 O ILE B1339 N TRP A1393 SHEET 4 AA2 6 ALA B1413 ASP B1420 1 O LEU B1416 N MET B1338 SHEET 5 AA2 6 PRO B1446 THR B1452 1 O THR B1452 N TYR B1419 SHEET 6 AA2 6 ALA B1481 PHE B1487 1 O HIS B1486 N GLY B1451 LINK OG1 THR A1348 MG MG A1601 1555 1555 2.04 LINK MG MG A1601 O3B GDP A1602 1555 1555 2.02 LINK MG MG A1601 O HOH A1713 1555 1555 2.12 LINK MG MG A1601 O HOH A1720 1555 1555 2.07 LINK MG MG A1601 O HOH A1741 1555 1555 2.13 LINK MG MG A1601 O HOH B1707 1555 1555 2.13 LINK O HOH A1704 MG MG B1601 1555 1555 2.22 LINK OG1 THR B1348 MG MG B1601 1555 1555 2.02 LINK MG MG B1601 O1B GDP B1602 1555 1555 2.05 LINK MG MG B1601 O HOH B1721 1555 1555 2.06 LINK MG MG B1601 O HOH B1725 1555 1555 2.05 LINK MG MG B1601 O HOH B1745 1555 1555 2.01 CRYST1 44.497 101.785 44.527 90.00 101.38 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022473 0.000000 0.004523 0.00000 SCALE2 0.000000 0.009825 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022909 0.00000