PDB Short entry for 6Z1A HEADER ISOMERASE 13-MAY-20 6Z1A TITLE TERNARY COMPLEX OF STAPHYLOCOCCUS AUREUS DNA GYRASE WITH AMK12 AND DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA GYRASE SUBUNIT B,DNA GYRASE SUBUNIT A; COMPND 3 CHAIN: B, D; COMPND 4 EC: 5.6.2.2,5.6.2.2; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: FUSION OF FRAGMENTS TAKEN FROM C-TERMINAL DOMAIN OF COMPND 8 GYRB (RESIDUES 410-543 AND 580-644) TO N-TERMINAL DOMAIN OF GYRA COMPND 9 (RESIDUES 2-491). FOR THE GYRB COMPONENT, DELETION OF RESIDUES 544- COMPND 10 579 REMOVES A GREEK KEY MOTIF. THE DELETED SEQUENCE IS REPLACED BY 2 COMPND 11 RESIDUES: TG. FOR THE GYRA COMPONENT, THE SEQUENCE NUMBERING IS COMPND 12 ADVANCED BY 1000 IN THE COORDINATE FILE.,FUSION OF FRAGMENTS TAKEN COMPND 13 FROM C-TERMINAL DOMAIN OF GYRB (RESIDUES 410-543 AND 580-644) TO N- COMPND 14 TERMINAL DOMAIN OF GYRA (RESIDUES 2-491). FOR THE GYRB COMPONENT, COMPND 15 DELETION OF RESIDUES 544-579 REMOVES A GREEK KEY MOTIF. THE DELETED COMPND 16 SEQUENCE IS REPLACED BY 2 RESIDUES: TG. FOR THE GYRA COMPONENT, THE COMPND 17 SEQUENCE NUMBERING IS ADVANCED BY 1000 IN THE COORDINATE FILE.,FUSION COMPND 18 OF FRAGMENTS TAKEN FROM C-TERMINAL DOMAIN OF GYRB (RESIDUES 410-543 COMPND 19 AND 580-644) TO N-TERMINAL DOMAIN OF GYRA (RESIDUES 2-491). FOR THE COMPND 20 GYRB COMPONENT, DELETION OF RESIDUES 544-579 REMOVES A GREEK KEY COMPND 21 MOTIF. THE DELETED SEQUENCE IS REPLACED BY 2 RESIDUES: TG. FOR THE COMPND 22 GYRA COMPONENT, THE SEQUENCE NUMBERING IS ADVANCED BY 1000 IN THE COMPND 23 COORDINATE FILE.,FUSION OF FRAGMENTS TAKEN FROM C-TERMINAL DOMAIN OF COMPND 24 GYRB (RESIDUES 410-543 AND 580-644) TO N-TERMINAL DOMAIN OF GYRA COMPND 25 (RESIDUES 2-491). FOR THE GYRB COMPONENT, DELETION OF RESIDUES 544- COMPND 26 579 REMOVES A GREEK KEY MOTIF. THE DELETED SEQUENCE IS REPLACED BY 2 COMPND 27 RESIDUES: TG. FOR THE GYRA COMPONENT, THE SEQUENCE NUMBERING IS COMPND 28 ADVANCED BY 1000 IN THE COORDINATE FILE.; COMPND 29 MOL_ID: 2; COMPND 30 MOLECULE: DNA (5'-D(*AP*GP*CP*CP*GP*TP*AP*G)-3'); COMPND 31 CHAIN: E, F; COMPND 32 ENGINEERED: YES; COMPND 33 MOL_ID: 3; COMPND 34 MOLECULE: DNA (5'-D(P*GP*TP*AP*CP*CP*TP*AP*CP*GP*GP*CP*T)-3'); COMPND 35 CHAIN: G, H; COMPND 36 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: GYRB, GYRA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS N315; SOURCE 10 ORGANISM_TAXID: 158879; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS N315; SOURCE 14 ORGANISM_TAXID: 158879 KEYWDS TYPE IIA TOPOISOMERASE, ANTIBACTERIAL, INHIBITOR, ISOMERASE, FUSION KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.KOLARIC,T.GERME,M.HRAST,C.E.M.STEVENSON,D.M.LAWSON,N.BURTON, AUTHOR 2 J.VOROS,A.MAXWELL,N.MINOVSKI,M.ANDERLUH REVDAT 3 24-JAN-24 6Z1A 1 REMARK REVDAT 2 20-JAN-21 6Z1A 1 JRNL REVDAT 1 11-NOV-20 6Z1A 0 JRNL AUTH A.KOLARIC,T.GERME,M.HRAST,C.E.M.STEVENSON,D.M.LAWSON, JRNL AUTH 2 N.P.BURTON,J.VOROS,A.MAXWELL,N.MINOVSKI,M.ANDERLUH JRNL TITL POTENT DNA GYRASE INHIBITORS BIND ASYMMETRICALLY TO THEIR JRNL TITL 2 TARGET USING SYMMETRICAL BIFURCATED HALOGEN BONDS. JRNL REF NAT COMMUN V. 12 150 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33420011 JRNL DOI 10.1038/S41467-020-20405-8 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 82229 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 4484 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6047 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 348 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10548 REMARK 3 NUCLEIC ACID ATOMS : 801 REMARK 3 HETEROGEN ATOMS : 76 REMARK 3 SOLVENT ATOMS : 343 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.53000 REMARK 3 B22 (A**2) : -0.53000 REMARK 3 B33 (A**2) : 1.72000 REMARK 3 B12 (A**2) : -0.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.243 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.192 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.287 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11714 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 10747 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15936 ; 1.636 ; 1.606 REMARK 3 BOND ANGLES OTHERS (DEGREES): 24834 ; 1.358 ; 1.639 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1344 ; 6.675 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 642 ;31.192 ;21.184 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1971 ;15.068 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 116 ;17.822 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1544 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12626 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2510 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 B 417 1489 D 417 1489 21108 0.090 0.050 REMARK 3 2 G 2009 2020 H 2009 2020 822 0.130 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 417 B 537 REMARK 3 ORIGIN FOR THE GROUP (A): 15.0499 57.4915 62.4937 REMARK 3 T TENSOR REMARK 3 T11: 0.1780 T22: 0.1822 REMARK 3 T33: 0.1422 T12: 0.0025 REMARK 3 T13: 0.0444 T23: -0.0817 REMARK 3 L TENSOR REMARK 3 L11: 3.0916 L22: 1.5509 REMARK 3 L33: 1.8877 L12: -0.2469 REMARK 3 L13: -2.0431 L23: -0.1918 REMARK 3 S TENSOR REMARK 3 S11: 0.1665 S12: -0.1500 S13: 0.3519 REMARK 3 S21: 0.1383 S22: 0.0117 S23: 0.1853 REMARK 3 S31: -0.2751 S32: -0.1532 S33: -0.1782 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 538 B 1018 REMARK 3 ORIGIN FOR THE GROUP (A): 22.9858 46.2795 65.5033 REMARK 3 T TENSOR REMARK 3 T11: 0.2421 T22: 0.1837 REMARK 3 T33: 0.1109 T12: -0.0102 REMARK 3 T13: -0.0269 T23: -0.0235 REMARK 3 L TENSOR REMARK 3 L11: 6.0186 L22: 0.5902 REMARK 3 L33: 2.0701 L12: -0.2314 REMARK 3 L13: -2.0467 L23: -0.4210 REMARK 3 S TENSOR REMARK 3 S11: -0.0749 S12: -0.4039 S13: -0.4593 REMARK 3 S21: 0.2486 S22: 0.0199 S23: -0.0354 REMARK 3 S31: 0.1223 S32: 0.1267 S33: 0.0550 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1019 B 1365 REMARK 3 ORIGIN FOR THE GROUP (A): 29.5029 36.8711 31.1267 REMARK 3 T TENSOR REMARK 3 T11: 0.0308 T22: 0.0103 REMARK 3 T33: 0.0568 T12: -0.0056 REMARK 3 T13: 0.0215 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 0.6534 L22: 0.8720 REMARK 3 L33: 1.5940 L12: -0.0617 REMARK 3 L13: -0.0597 L23: -0.2761 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: 0.0290 S13: -0.1037 REMARK 3 S21: 0.0052 S22: 0.0139 S23: 0.0489 REMARK 3 S31: -0.1106 S32: -0.0130 S33: -0.0277 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1366 B 1491 REMARK 3 ORIGIN FOR THE GROUP (A): 21.5064 -2.1060 40.2625 REMARK 3 T TENSOR REMARK 3 T11: 0.1616 T22: 0.1033 REMARK 3 T33: 0.2502 T12: 0.0199 REMARK 3 T13: -0.0222 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 2.0834 L22: 3.2183 REMARK 3 L33: 1.0414 L12: 2.2999 REMARK 3 L13: -1.0032 L23: -1.5468 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: -0.0778 S13: -0.4752 REMARK 3 S21: -0.0059 S22: -0.0308 S23: -0.4557 REMARK 3 S31: 0.0862 S32: -0.0801 S33: 0.0628 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 416 D 1022 REMARK 3 ORIGIN FOR THE GROUP (A): -4.6054 53.1692 16.6427 REMARK 3 T TENSOR REMARK 3 T11: 0.2758 T22: 0.2364 REMARK 3 T33: 0.0968 T12: 0.0692 REMARK 3 T13: 0.0275 T23: 0.1204 REMARK 3 L TENSOR REMARK 3 L11: 4.0839 L22: 1.0996 REMARK 3 L33: 1.6520 L12: -0.4230 REMARK 3 L13: -1.1526 L23: 0.4651 REMARK 3 S TENSOR REMARK 3 S11: 0.0917 S12: 0.5249 S13: 0.3165 REMARK 3 S21: -0.2000 S22: 0.0238 S23: -0.0215 REMARK 3 S31: -0.2425 S32: -0.1108 S33: -0.1155 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1023 D 1213 REMARK 3 ORIGIN FOR THE GROUP (A): -14.4173 32.8560 44.8264 REMARK 3 T TENSOR REMARK 3 T11: 0.0679 T22: 0.0221 REMARK 3 T33: 0.0496 T12: 0.0247 REMARK 3 T13: 0.0138 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 1.7648 L22: 0.7978 REMARK 3 L33: 1.3172 L12: 0.3343 REMARK 3 L13: -0.3674 L23: -0.0192 REMARK 3 S TENSOR REMARK 3 S11: -0.0122 S12: -0.0207 S13: -0.2078 REMARK 3 S21: -0.0711 S22: 0.0197 S23: -0.0950 REMARK 3 S31: 0.0790 S32: 0.1446 S33: -0.0075 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1214 D 1333 REMARK 3 ORIGIN FOR THE GROUP (A): -20.4470 57.7407 61.5296 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.0340 REMARK 3 T33: 0.0564 T12: 0.0131 REMARK 3 T13: 0.0270 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 1.8480 L22: 2.3078 REMARK 3 L33: 3.8731 L12: 0.7060 REMARK 3 L13: 1.4162 L23: 1.4456 REMARK 3 S TENSOR REMARK 3 S11: -0.0788 S12: -0.0803 S13: 0.2063 REMARK 3 S21: -0.1637 S22: -0.1052 S23: 0.0676 REMARK 3 S31: -0.5243 S32: 0.0549 S33: 0.1840 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1334 D 1490 REMARK 3 ORIGIN FOR THE GROUP (A): -17.9520 6.8154 43.9860 REMARK 3 T TENSOR REMARK 3 T11: 0.1193 T22: 0.0784 REMARK 3 T33: 0.1270 T12: -0.0174 REMARK 3 T13: 0.0205 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 0.3804 L22: 2.5750 REMARK 3 L33: 0.0782 L12: -0.8521 REMARK 3 L13: -0.0586 L23: 0.2705 REMARK 3 S TENSOR REMARK 3 S11: 0.0407 S12: 0.0507 S13: -0.1639 REMARK 3 S21: -0.0661 S22: -0.0678 S23: 0.2349 REMARK 3 S31: 0.0654 S32: -0.0032 S33: 0.0271 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 8 REMARK 3 ORIGIN FOR THE GROUP (A): 24.7173 48.8751 40.0682 REMARK 3 T TENSOR REMARK 3 T11: 0.1467 T22: 0.1057 REMARK 3 T33: 0.1204 T12: -0.0725 REMARK 3 T13: -0.0336 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 4.4258 L22: 4.4087 REMARK 3 L33: 0.0595 L12: 1.7170 REMARK 3 L13: 0.3586 L23: 0.4238 REMARK 3 S TENSOR REMARK 3 S11: -0.2270 S12: 0.2099 S13: 0.4847 REMARK 3 S21: -0.7356 S22: 0.1847 S23: 0.4027 REMARK 3 S31: -0.0814 S32: 0.0534 S33: 0.0423 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 8 REMARK 3 ORIGIN FOR THE GROUP (A): -11.6695 52.1101 39.9643 REMARK 3 T TENSOR REMARK 3 T11: 0.1158 T22: 0.1352 REMARK 3 T33: 0.2009 T12: 0.0436 REMARK 3 T13: -0.0354 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 5.8979 L22: 6.9820 REMARK 3 L33: 5.0117 L12: -2.1488 REMARK 3 L13: -2.2377 L23: 1.3625 REMARK 3 S TENSOR REMARK 3 S11: -0.0712 S12: -0.1602 S13: 0.9307 REMARK 3 S21: 0.5821 S22: 0.0581 S23: -0.2540 REMARK 3 S31: -0.3898 S32: -0.0415 S33: 0.0131 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 2009 G 2012 REMARK 3 ORIGIN FOR THE GROUP (A): 6.1723 51.6042 44.1723 REMARK 3 T TENSOR REMARK 3 T11: 0.1683 T22: 0.1849 REMARK 3 T33: 0.2602 T12: -0.0152 REMARK 3 T13: 0.0086 T23: -0.0267 REMARK 3 L TENSOR REMARK 3 L11: 9.4483 L22: 4.9087 REMARK 3 L33: 13.5137 L12: -2.9659 REMARK 3 L13: 4.4375 L23: 0.5620 REMARK 3 S TENSOR REMARK 3 S11: -0.2553 S12: -0.5464 S13: 0.1633 REMARK 3 S21: -0.2320 S22: 0.4316 S23: -0.0764 REMARK 3 S31: -0.4496 S32: -0.7522 S33: -0.1763 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 2013 G 2020 REMARK 3 ORIGIN FOR THE GROUP (A): -15.8029 55.0081 37.0145 REMARK 3 T TENSOR REMARK 3 T11: 0.1637 T22: 0.1003 REMARK 3 T33: 0.1009 T12: 0.0532 REMARK 3 T13: 0.0073 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 6.3523 L22: 3.3393 REMARK 3 L33: 2.0236 L12: -0.0817 REMARK 3 L13: -0.8286 L23: -0.4201 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: -0.5063 S13: 0.5734 REMARK 3 S21: 0.2765 S22: -0.0063 S23: 0.0484 REMARK 3 S31: -0.3358 S32: 0.0649 S33: 0.0211 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 2009 H 2012 REMARK 3 ORIGIN FOR THE GROUP (A): 7.0666 52.1847 35.0416 REMARK 3 T TENSOR REMARK 3 T11: 0.5320 T22: 0.3415 REMARK 3 T33: 0.2865 T12: 0.0066 REMARK 3 T13: 0.0258 T23: -0.0645 REMARK 3 L TENSOR REMARK 3 L11: 1.1579 L22: 4.7760 REMARK 3 L33: 5.8729 L12: -2.3401 REMARK 3 L13: 2.4570 L23: -5.1403 REMARK 3 S TENSOR REMARK 3 S11: -0.0295 S12: 0.1694 S13: 0.1846 REMARK 3 S21: 0.2079 S22: -0.3093 S23: -0.3631 REMARK 3 S31: -0.6366 S32: 0.2599 S33: 0.3388 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 2013 H 2020 REMARK 3 ORIGIN FOR THE GROUP (A): 28.3514 51.3087 43.9242 REMARK 3 T TENSOR REMARK 3 T11: 0.1418 T22: 0.0209 REMARK 3 T33: 0.0416 T12: -0.0315 REMARK 3 T13: 0.0039 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 7.7940 L22: 5.0066 REMARK 3 L33: 4.8207 L12: -2.2404 REMARK 3 L13: -0.9250 L23: 0.2550 REMARK 3 S TENSOR REMARK 3 S11: 0.2142 S12: 0.2232 S13: 0.3526 REMARK 3 S21: -0.4894 S22: -0.0253 S23: -0.0457 REMARK 3 S31: -0.3291 S32: 0.0707 S33: -0.1888 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6Z1A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108648. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86845 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 81.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.20 REMARK 200 R MERGE (I) : 0.19300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 15.60 REMARK 200 R MERGE FOR SHELL (I) : 2.01700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC 5.8.0258 REMARK 200 STARTING MODEL: 2XCS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL, PH 7.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 135.15467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 270.30933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 202.73200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 337.88667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.57733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 409 REMARK 465 ASP B 410 REMARK 465 VAL B 411 REMARK 465 ALA B 412 REMARK 465 SER B 413 REMARK 465 LEU B 414 REMARK 465 PRO B 415 REMARK 465 GLY B 416 REMARK 465 ALA B 997 REMARK 465 ASN B 998 REMARK 465 LEU B 999 REMARK 465 ASP B 1000 REMARK 465 PHE B 1001 REMARK 465 ALA B 1002 REMARK 465 GLU B 1003 REMARK 465 LEU B 1004 REMARK 465 PRO B 1005 REMARK 465 GLN B 1006 REMARK 465 SER B 1007 REMARK 465 ARG B 1008 REMARK 465 ILE B 1009 REMARK 465 MET D 409 REMARK 465 ASP D 410 REMARK 465 VAL D 411 REMARK 465 ALA D 412 REMARK 465 SER D 413 REMARK 465 LEU D 414 REMARK 465 PRO D 415 REMARK 465 ALA D 997 REMARK 465 ASN D 998 REMARK 465 LEU D 999 REMARK 465 ASP D 1000 REMARK 465 PHE D 1001 REMARK 465 ALA D 1002 REMARK 465 GLU D 1003 REMARK 465 LEU D 1004 REMARK 465 PRO D 1005 REMARK 465 GLN D 1006 REMARK 465 SER D 1007 REMARK 465 ARG D 1008 REMARK 465 ILE D 1009 REMARK 465 GLY D 1491 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 417 CG CD CE NZ REMARK 470 GLU B 427 CG CD OE1 OE2 REMARK 470 LYS B 581 CG CD CE NZ REMARK 470 GLU B 585 CG CD OE1 OE2 REMARK 470 ASN B1010 CG OD1 ND2 REMARK 470 GLU B1275 CG CD OE1 OE2 REMARK 470 ARG B1299 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1440 CG CD CE NZ REMARK 470 GLU B1447 CG CD OE1 OE2 REMARK 470 LYS D 417 CG CD CE NZ REMARK 470 GLU D 427 CG CD OE1 OE2 REMARK 470 ARG D 468 CZ NH1 NH2 REMARK 470 LYS D 497 CG CD CE NZ REMARK 470 LYS D 581 CG CD CE NZ REMARK 470 LYS D 607 CG CD CE NZ REMARK 470 ASN D1010 CG OD1 ND2 REMARK 470 LYS D1065 CG CD CE NZ REMARK 470 LYS D1066 CG CD CE NZ REMARK 470 ARG D1299 CG CD NE CZ NH1 NH2 REMARK 470 ARG D1342 CG CD NE CZ NH1 NH2 REMARK 470 DT H2020 C4' O4' C3' O3' C2' C1' N1 REMARK 470 DT H2020 C2 O2 N3 C4 O4 C5 C7 REMARK 470 DT H2020 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 435 O HOH B 1801 2.06 REMARK 500 OD2 ASP B 1404 NH2 ARG D 1431 2.10 REMARK 500 O HOH D 1840 O HOH D 1853 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 1853 O HOH E 1702 1445 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG G2009 P DG G2009 OP3 -0.077 REMARK 500 DG H2009 P DG H2009 OP3 -0.114 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B1092 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG D1432 CG - CD - NE ANGL. DEV. = 12.8 DEGREES REMARK 500 DG F 5 O5' - P - OP2 ANGL. DEV. = -8.0 DEGREES REMARK 500 DA G2011 O5' - P - OP1 ANGL. DEV. = -11.0 DEGREES REMARK 500 DC H2019 C1' - O4' - C4' ANGL. DEV. = -6.1 DEGREES REMARK 500 DT H2020 O5' - P - OP1 ANGL. DEV. = -9.9 DEGREES REMARK 500 DT H2020 O5' - P - OP2 ANGL. DEV. = 9.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET B 528 38.14 -145.10 REMARK 500 LYS B 581 -104.66 -12.13 REMARK 500 ALA B1032 36.72 -146.61 REMARK 500 ARG B1033 -67.08 -161.27 REMARK 500 MET B1058 59.28 -91.87 REMARK 500 ASP B1138 11.58 80.18 REMARK 500 ASN B1149 -175.52 -66.45 REMARK 500 ALA B1162 71.77 54.63 REMARK 500 PRO B1165 79.17 -69.25 REMARK 500 ALA B1176 -136.90 -104.88 REMARK 500 ASN B1201 85.50 -161.44 REMARK 500 ALA B1221 -118.67 63.64 REMARK 500 PRO B1326 5.38 -66.44 REMARK 500 ASN B1334 76.49 -157.58 REMARK 500 LEU D 457 -155.93 -93.13 REMARK 500 MET D 528 41.09 -144.03 REMARK 500 GLN D 541 72.80 -119.37 REMARK 500 ALA D1032 35.70 -145.94 REMARK 500 ARG D1033 -67.70 -160.56 REMARK 500 MET D1058 59.62 -91.42 REMARK 500 ASP D1138 10.18 80.62 REMARK 500 ASN D1149 -176.85 -67.51 REMARK 500 PRO D1165 76.00 -68.93 REMARK 500 ALA D1176 -138.28 -104.02 REMARK 500 ASN D1201 87.14 -162.78 REMARK 500 ALA D1221 -121.49 68.78 REMARK 500 ASP D1311 -0.98 79.79 REMARK 500 PRO D1326 5.75 -66.20 REMARK 500 ASN D1334 78.78 -157.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1702 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 508 OD2 REMARK 620 2 ASP B 510 OD2 108.7 REMARK 620 3 HOH B1815 O 164.4 81.0 REMARK 620 4 HOH B1834 O 103.6 87.7 88.6 REMARK 620 5 HOH B1861 O 85.4 165.6 84.5 91.9 REMARK 620 6 HOH B1869 O 92.5 89.6 75.1 163.7 86.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1605 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 435 OE2 REMARK 620 2 ASP D 508 OD2 92.1 REMARK 620 3 HOH D1705 O 74.4 101.5 REMARK 620 4 HOH D1777 O 152.1 89.1 78.0 REMARK 620 5 DG H2009 OP2 86.1 102.3 149.6 120.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1606 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D1390 NE2 REMARK 620 2 HOH D1836 O 102.0 REMARK 620 3 HOH D1840 O 104.5 93.1 REMARK 620 4 HOH D1853 O 167.5 75.6 63.7 REMARK 620 5 HOH E1702 O 117.3 139.5 68.7 63.9 REMARK 620 6 HOH E1707 O 103.1 87.1 151.7 89.1 93.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN G2102 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH E1704 O REMARK 620 2 HOH E1708 O 84.9 REMARK 620 3 DG G2009 N7 105.3 100.8 REMARK 620 4 HOH G2201 O 82.4 158.5 99.3 REMARK 620 5 HOH G2204 O 153.2 115.4 88.6 72.7 REMARK 620 6 HOH G2208 O 70.4 73.4 172.8 86.0 97.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE B 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 1702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS D 1601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS D 1602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE D 1603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL D 1604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN D 1605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN D 1606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS E 1601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q52 G 2101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN G 2102 DBREF 6Z1A B 410 1001 UNP P0A0K8 GYRB_STAAU 410 644 DBREF 6Z1A B 1002 1491 UNP P20831 GYRA_STAAU 2 491 DBREF 6Z1A D 410 1001 UNP P0A0K8 GYRB_STAAU 410 644 DBREF 6Z1A D 1002 1491 UNP P20831 GYRA_STAAU 2 491 DBREF 6Z1A E 1 8 PDB 6Z1A 6Z1A 1 8 DBREF 6Z1A F 1 8 PDB 6Z1A 6Z1A 1 8 DBREF 6Z1A G 2009 2020 PDB 6Z1A 6Z1A 2009 2020 DBREF 6Z1A H 2009 2020 PDB 6Z1A 6Z1A 2009 2020 SEQADV 6Z1A MET B 409 UNP P0A0K8 INITIATING METHIONINE SEQADV 6Z1A B UNP P0A0K8 LEU 544 DELETION SEQADV 6Z1A B UNP P0A0K8 TYR 545 DELETION SEQADV 6Z1A B UNP P0A0K8 LYS 546 DELETION SEQADV 6Z1A B UNP P0A0K8 LEU 547 DELETION SEQADV 6Z1A B UNP P0A0K8 THR 548 DELETION SEQADV 6Z1A B UNP P0A0K8 GLN 549 DELETION SEQADV 6Z1A B UNP P0A0K8 GLY 550 DELETION SEQADV 6Z1A B UNP P0A0K8 LYS 551 DELETION SEQADV 6Z1A B UNP P0A0K8 GLN 552 DELETION SEQADV 6Z1A B UNP P0A0K8 LYS 553 DELETION SEQADV 6Z1A B UNP P0A0K8 TYR 554 DELETION SEQADV 6Z1A B UNP P0A0K8 TYR 555 DELETION SEQADV 6Z1A B UNP P0A0K8 VAL 556 DELETION SEQADV 6Z1A B UNP P0A0K8 TYR 557 DELETION SEQADV 6Z1A B UNP P0A0K8 ASN 558 DELETION SEQADV 6Z1A B UNP P0A0K8 ASP 559 DELETION SEQADV 6Z1A B UNP P0A0K8 ARG 560 DELETION SEQADV 6Z1A B UNP P0A0K8 GLU 561 DELETION SEQADV 6Z1A B UNP P0A0K8 LEU 562 DELETION SEQADV 6Z1A B UNP P0A0K8 ASP 563 DELETION SEQADV 6Z1A B UNP P0A0K8 LYS 564 DELETION SEQADV 6Z1A B UNP P0A0K8 LEU 565 DELETION SEQADV 6Z1A B UNP P0A0K8 LYS 566 DELETION SEQADV 6Z1A B UNP P0A0K8 SER 567 DELETION SEQADV 6Z1A B UNP P0A0K8 GLU 568 DELETION SEQADV 6Z1A B UNP P0A0K8 LEU 569 DELETION SEQADV 6Z1A B UNP P0A0K8 ASN 570 DELETION SEQADV 6Z1A B UNP P0A0K8 PRO 571 DELETION SEQADV 6Z1A B UNP P0A0K8 THR 572 DELETION SEQADV 6Z1A B UNP P0A0K8 PRO 573 DELETION SEQADV 6Z1A B UNP P0A0K8 LYS 574 DELETION SEQADV 6Z1A B UNP P0A0K8 TRP 575 DELETION SEQADV 6Z1A B UNP P0A0K8 SER 576 DELETION SEQADV 6Z1A B UNP P0A0K8 ILE 577 DELETION SEQADV 6Z1A THR B 544 UNP P0A0K8 ALA 578 CONFLICT SEQADV 6Z1A GLY B 545 UNP P0A0K8 ARG 579 CONFLICT SEQADV 6Z1A PHE B 1123 UNP P20831 TYR 123 ENGINEERED MUTATION SEQADV 6Z1A MET D 409 UNP P0A0K8 INITIATING METHIONINE SEQADV 6Z1A D UNP P0A0K8 LEU 544 DELETION SEQADV 6Z1A D UNP P0A0K8 TYR 545 DELETION SEQADV 6Z1A D UNP P0A0K8 LYS 546 DELETION SEQADV 6Z1A D UNP P0A0K8 LEU 547 DELETION SEQADV 6Z1A D UNP P0A0K8 THR 548 DELETION SEQADV 6Z1A D UNP P0A0K8 GLN 549 DELETION SEQADV 6Z1A D UNP P0A0K8 GLY 550 DELETION SEQADV 6Z1A D UNP P0A0K8 LYS 551 DELETION SEQADV 6Z1A D UNP P0A0K8 GLN 552 DELETION SEQADV 6Z1A D UNP P0A0K8 LYS 553 DELETION SEQADV 6Z1A D UNP P0A0K8 TYR 554 DELETION SEQADV 6Z1A D UNP P0A0K8 TYR 555 DELETION SEQADV 6Z1A D UNP P0A0K8 VAL 556 DELETION SEQADV 6Z1A D UNP P0A0K8 TYR 557 DELETION SEQADV 6Z1A D UNP P0A0K8 ASN 558 DELETION SEQADV 6Z1A D UNP P0A0K8 ASP 559 DELETION SEQADV 6Z1A D UNP P0A0K8 ARG 560 DELETION SEQADV 6Z1A D UNP P0A0K8 GLU 561 DELETION SEQADV 6Z1A D UNP P0A0K8 LEU 562 DELETION SEQADV 6Z1A D UNP P0A0K8 ASP 563 DELETION SEQADV 6Z1A D UNP P0A0K8 LYS 564 DELETION SEQADV 6Z1A D UNP P0A0K8 LEU 565 DELETION SEQADV 6Z1A D UNP P0A0K8 LYS 566 DELETION SEQADV 6Z1A D UNP P0A0K8 SER 567 DELETION SEQADV 6Z1A D UNP P0A0K8 GLU 568 DELETION SEQADV 6Z1A D UNP P0A0K8 LEU 569 DELETION SEQADV 6Z1A D UNP P0A0K8 ASN 570 DELETION SEQADV 6Z1A D UNP P0A0K8 PRO 571 DELETION SEQADV 6Z1A D UNP P0A0K8 THR 572 DELETION SEQADV 6Z1A D UNP P0A0K8 PRO 573 DELETION SEQADV 6Z1A D UNP P0A0K8 LYS 574 DELETION SEQADV 6Z1A D UNP P0A0K8 TRP 575 DELETION SEQADV 6Z1A D UNP P0A0K8 SER 576 DELETION SEQADV 6Z1A D UNP P0A0K8 ILE 577 DELETION SEQADV 6Z1A THR D 544 UNP P0A0K8 ALA 578 CONFLICT SEQADV 6Z1A GLY D 545 UNP P0A0K8 ARG 579 CONFLICT SEQADV 6Z1A PHE D 1123 UNP P20831 TYR 123 ENGINEERED MUTATION SEQRES 1 B 692 MET ASP VAL ALA SER LEU PRO GLY LYS LEU ALA ASP CYS SEQRES 2 B 692 SER SER LYS SER PRO GLU GLU CYS GLU ILE PHE LEU VAL SEQRES 3 B 692 GLU GLY ASP SER ALA GLY GLY SER THR LYS SER GLY ARG SEQRES 4 B 692 ASP SER ARG THR GLN ALA ILE LEU PRO LEU ARG GLY LYS SEQRES 5 B 692 ILE LEU ASN VAL GLU LYS ALA ARG LEU ASP ARG ILE LEU SEQRES 6 B 692 ASN ASN ASN GLU ILE ARG GLN MET ILE THR ALA PHE GLY SEQRES 7 B 692 THR GLY ILE GLY GLY ASP PHE ASP LEU ALA LYS ALA ARG SEQRES 8 B 692 TYR HIS LYS ILE VAL ILE MET THR ASP ALA ASP VAL ASP SEQRES 9 B 692 GLY ALA HIS ILE ARG THR LEU LEU LEU THR PHE PHE TYR SEQRES 10 B 692 ARG PHE MET ARG PRO LEU ILE GLU ALA GLY TYR VAL TYR SEQRES 11 B 692 ILE ALA GLN PRO PRO THR GLY TYR LYS GLY LEU GLY GLU SEQRES 12 B 692 MET ASN ALA ASP GLN LEU TRP GLU THR THR MET ASN PRO SEQRES 13 B 692 GLU HIS ARG ALA LEU LEU GLN VAL LYS LEU GLU ASP ALA SEQRES 14 B 692 ILE GLU ALA ASP GLN THR PHE GLU MET LEU MET GLY ASP SEQRES 15 B 692 VAL VAL GLU ASN ARG ARG GLN PHE ILE GLU ASP ASN ALA SEQRES 16 B 692 VAL TYR ALA ASN LEU ASP PHE ALA GLU LEU PRO GLN SER SEQRES 17 B 692 ARG ILE ASN GLU ARG ASN ILE THR SER GLU MET ARG GLU SEQRES 18 B 692 SER PHE LEU ASP TYR ALA MET SER VAL ILE VAL ALA ARG SEQRES 19 B 692 ALA LEU PRO ASP VAL ARG ASP GLY LEU LYS PRO VAL HIS SEQRES 20 B 692 ARG ARG ILE LEU TYR GLY LEU ASN GLU GLN GLY MET THR SEQRES 21 B 692 PRO ASP LYS SER TYR LYS LYS SER ALA ARG ILE VAL GLY SEQRES 22 B 692 ASP VAL MET GLY LYS TYR HIS PRO HIS GLY ASP SER SER SEQRES 23 B 692 ILE TYR GLU ALA MET VAL ARG MET ALA GLN ASP PHE SER SEQRES 24 B 692 TYR ARG TYR PRO LEU VAL ASP GLY GLN GLY ASN PHE GLY SEQRES 25 B 692 SER MET ASP GLY ASP GLY ALA ALA ALA MET ARG PHE THR SEQRES 26 B 692 GLU ALA ARG MET THR LYS ILE THR LEU GLU LEU LEU ARG SEQRES 27 B 692 ASP ILE ASN LYS ASP THR ILE ASP PHE ILE ASP ASN TYR SEQRES 28 B 692 ASP GLY ASN GLU ARG GLU PRO SER VAL LEU PRO ALA ARG SEQRES 29 B 692 PHE PRO ASN LEU LEU ALA ASN GLY ALA SER GLY ILE ALA SEQRES 30 B 692 VAL GLY MET ALA THR ASN ILE PRO PRO HIS ASN LEU THR SEQRES 31 B 692 GLU LEU ILE ASN GLY VAL LEU SER LEU SER LYS ASN PRO SEQRES 32 B 692 ASP ILE SER ILE ALA GLU LEU MET GLU ASP ILE GLU GLY SEQRES 33 B 692 PRO ASP PHE PRO THR ALA GLY LEU ILE LEU GLY LYS SER SEQRES 34 B 692 GLY ILE ARG ARG ALA TYR GLU THR GLY ARG GLY SER ILE SEQRES 35 B 692 GLN MET ARG SER ARG ALA VAL ILE GLU GLU ARG GLY GLY SEQRES 36 B 692 GLY ARG GLN ARG ILE VAL VAL THR GLU ILE PRO PHE GLN SEQRES 37 B 692 VAL ASN LYS ALA ARG MET ILE GLU LYS ILE ALA GLU LEU SEQRES 38 B 692 VAL ARG ASP LYS LYS ILE ASP GLY ILE THR ASP LEU ARG SEQRES 39 B 692 ASP GLU THR SER LEU ARG THR GLY VAL ARG VAL VAL ILE SEQRES 40 B 692 ASP VAL ARG LYS ASP ALA ASN ALA SER VAL ILE LEU ASN SEQRES 41 B 692 ASN LEU TYR LYS GLN THR PRO LEU GLN THR SER PHE GLY SEQRES 42 B 692 VAL ASN MET ILE ALA LEU VAL ASN GLY ARG PRO LYS LEU SEQRES 43 B 692 ILE ASN LEU LYS GLU ALA LEU VAL HIS TYR LEU GLU HIS SEQRES 44 B 692 GLN LYS THR VAL VAL ARG ARG ARG THR GLN TYR ASN LEU SEQRES 45 B 692 ARG LYS ALA LYS ASP ARG ALA HIS ILE LEU GLU GLY LEU SEQRES 46 B 692 ARG ILE ALA LEU ASP HIS ILE ASP GLU ILE ILE SER THR SEQRES 47 B 692 ILE ARG GLU SER ASP THR ASP LYS VAL ALA MET GLU SER SEQRES 48 B 692 LEU GLN GLN ARG PHE LYS LEU SER GLU LYS GLN ALA GLN SEQRES 49 B 692 ALA ILE LEU ASP MET ARG LEU ARG ARG LEU THR GLY LEU SEQRES 50 B 692 GLU ARG ASP LYS ILE GLU ALA GLU TYR ASN GLU LEU LEU SEQRES 51 B 692 ASN TYR ILE SER GLU LEU GLU ALA ILE LEU ALA ASP GLU SEQRES 52 B 692 GLU VAL LEU LEU GLN LEU VAL ARG ASP GLU LEU THR GLU SEQRES 53 B 692 ILE ARG ASP ARG PHE GLY ASP ASP ARG ARG THR GLU ILE SEQRES 54 B 692 GLN LEU GLY SEQRES 1 D 692 MET ASP VAL ALA SER LEU PRO GLY LYS LEU ALA ASP CYS SEQRES 2 D 692 SER SER LYS SER PRO GLU GLU CYS GLU ILE PHE LEU VAL SEQRES 3 D 692 GLU GLY ASP SER ALA GLY GLY SER THR LYS SER GLY ARG SEQRES 4 D 692 ASP SER ARG THR GLN ALA ILE LEU PRO LEU ARG GLY LYS SEQRES 5 D 692 ILE LEU ASN VAL GLU LYS ALA ARG LEU ASP ARG ILE LEU SEQRES 6 D 692 ASN ASN ASN GLU ILE ARG GLN MET ILE THR ALA PHE GLY SEQRES 7 D 692 THR GLY ILE GLY GLY ASP PHE ASP LEU ALA LYS ALA ARG SEQRES 8 D 692 TYR HIS LYS ILE VAL ILE MET THR ASP ALA ASP VAL ASP SEQRES 9 D 692 GLY ALA HIS ILE ARG THR LEU LEU LEU THR PHE PHE TYR SEQRES 10 D 692 ARG PHE MET ARG PRO LEU ILE GLU ALA GLY TYR VAL TYR SEQRES 11 D 692 ILE ALA GLN PRO PRO THR GLY TYR LYS GLY LEU GLY GLU SEQRES 12 D 692 MET ASN ALA ASP GLN LEU TRP GLU THR THR MET ASN PRO SEQRES 13 D 692 GLU HIS ARG ALA LEU LEU GLN VAL LYS LEU GLU ASP ALA SEQRES 14 D 692 ILE GLU ALA ASP GLN THR PHE GLU MET LEU MET GLY ASP SEQRES 15 D 692 VAL VAL GLU ASN ARG ARG GLN PHE ILE GLU ASP ASN ALA SEQRES 16 D 692 VAL TYR ALA ASN LEU ASP PHE ALA GLU LEU PRO GLN SER SEQRES 17 D 692 ARG ILE ASN GLU ARG ASN ILE THR SER GLU MET ARG GLU SEQRES 18 D 692 SER PHE LEU ASP TYR ALA MET SER VAL ILE VAL ALA ARG SEQRES 19 D 692 ALA LEU PRO ASP VAL ARG ASP GLY LEU LYS PRO VAL HIS SEQRES 20 D 692 ARG ARG ILE LEU TYR GLY LEU ASN GLU GLN GLY MET THR SEQRES 21 D 692 PRO ASP LYS SER TYR LYS LYS SER ALA ARG ILE VAL GLY SEQRES 22 D 692 ASP VAL MET GLY LYS TYR HIS PRO HIS GLY ASP SER SER SEQRES 23 D 692 ILE TYR GLU ALA MET VAL ARG MET ALA GLN ASP PHE SER SEQRES 24 D 692 TYR ARG TYR PRO LEU VAL ASP GLY GLN GLY ASN PHE GLY SEQRES 25 D 692 SER MET ASP GLY ASP GLY ALA ALA ALA MET ARG PHE THR SEQRES 26 D 692 GLU ALA ARG MET THR LYS ILE THR LEU GLU LEU LEU ARG SEQRES 27 D 692 ASP ILE ASN LYS ASP THR ILE ASP PHE ILE ASP ASN TYR SEQRES 28 D 692 ASP GLY ASN GLU ARG GLU PRO SER VAL LEU PRO ALA ARG SEQRES 29 D 692 PHE PRO ASN LEU LEU ALA ASN GLY ALA SER GLY ILE ALA SEQRES 30 D 692 VAL GLY MET ALA THR ASN ILE PRO PRO HIS ASN LEU THR SEQRES 31 D 692 GLU LEU ILE ASN GLY VAL LEU SER LEU SER LYS ASN PRO SEQRES 32 D 692 ASP ILE SER ILE ALA GLU LEU MET GLU ASP ILE GLU GLY SEQRES 33 D 692 PRO ASP PHE PRO THR ALA GLY LEU ILE LEU GLY LYS SER SEQRES 34 D 692 GLY ILE ARG ARG ALA TYR GLU THR GLY ARG GLY SER ILE SEQRES 35 D 692 GLN MET ARG SER ARG ALA VAL ILE GLU GLU ARG GLY GLY SEQRES 36 D 692 GLY ARG GLN ARG ILE VAL VAL THR GLU ILE PRO PHE GLN SEQRES 37 D 692 VAL ASN LYS ALA ARG MET ILE GLU LYS ILE ALA GLU LEU SEQRES 38 D 692 VAL ARG ASP LYS LYS ILE ASP GLY ILE THR ASP LEU ARG SEQRES 39 D 692 ASP GLU THR SER LEU ARG THR GLY VAL ARG VAL VAL ILE SEQRES 40 D 692 ASP VAL ARG LYS ASP ALA ASN ALA SER VAL ILE LEU ASN SEQRES 41 D 692 ASN LEU TYR LYS GLN THR PRO LEU GLN THR SER PHE GLY SEQRES 42 D 692 VAL ASN MET ILE ALA LEU VAL ASN GLY ARG PRO LYS LEU SEQRES 43 D 692 ILE ASN LEU LYS GLU ALA LEU VAL HIS TYR LEU GLU HIS SEQRES 44 D 692 GLN LYS THR VAL VAL ARG ARG ARG THR GLN TYR ASN LEU SEQRES 45 D 692 ARG LYS ALA LYS ASP ARG ALA HIS ILE LEU GLU GLY LEU SEQRES 46 D 692 ARG ILE ALA LEU ASP HIS ILE ASP GLU ILE ILE SER THR SEQRES 47 D 692 ILE ARG GLU SER ASP THR ASP LYS VAL ALA MET GLU SER SEQRES 48 D 692 LEU GLN GLN ARG PHE LYS LEU SER GLU LYS GLN ALA GLN SEQRES 49 D 692 ALA ILE LEU ASP MET ARG LEU ARG ARG LEU THR GLY LEU SEQRES 50 D 692 GLU ARG ASP LYS ILE GLU ALA GLU TYR ASN GLU LEU LEU SEQRES 51 D 692 ASN TYR ILE SER GLU LEU GLU ALA ILE LEU ALA ASP GLU SEQRES 52 D 692 GLU VAL LEU LEU GLN LEU VAL ARG ASP GLU LEU THR GLU SEQRES 53 D 692 ILE ARG ASP ARG PHE GLY ASP ASP ARG ARG THR GLU ILE SEQRES 54 D 692 GLN LEU GLY SEQRES 1 E 8 DA DG DC DC DG DT DA DG SEQRES 1 F 8 DA DG DC DC DG DT DA DG SEQRES 1 G 12 DG DT DA DC DC DT DA DC DG DG DC DT SEQRES 1 H 12 DG DT DA DC DC DT DA DC DG DG DC DT HET EPE B1701 15 HET MN B1702 1 HET DMS D1601 4 HET DMS D1602 4 HET EPE D1603 15 HET CL D1604 1 HET MN D1605 1 HET MN D1606 1 HET DMS E1601 4 HET Q52 G2101 29 HET MN G2102 1 HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM MN MANGANESE (II) ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM CL CHLORIDE ION HETNAM Q52 ~{N}-[(4-CHLOROPHENYL)METHYL]-1-[2-(6-METHOXY-1,5- HETNAM 2 Q52 NAPHTHYRIDIN-4-YL)ETHYL]PIPERIDIN-4-AMINE HETSYN EPE HEPES FORMUL 7 EPE 2(C8 H18 N2 O4 S) FORMUL 8 MN 4(MN 2+) FORMUL 9 DMS 3(C2 H6 O S) FORMUL 12 CL CL 1- FORMUL 16 Q52 C23 H27 CL N4 O FORMUL 18 HOH *343(H2 O) HELIX 1 AA1 SER B 425 GLU B 428 5 4 HELIX 2 AA2 GLY B 436 ARG B 447 1 12 HELIX 3 AA3 ARG B 468 ASN B 474 1 7 HELIX 4 AA4 ASN B 475 GLY B 486 1 12 HELIX 5 AA5 ILE B 489 PHE B 493 5 5 HELIX 6 AA6 ASP B 494 ALA B 498 5 5 HELIX 7 AA7 ASP B 510 MET B 528 1 19 HELIX 8 AA8 MET B 528 ALA B 534 1 7 HELIX 9 AA9 GLY B 582 MET B 586 5 5 HELIX 10 AB1 ASN B 587 MET B 596 1 10 HELIX 11 AB2 ASP B 610 GLY B 623 1 14 HELIX 12 AB3 VAL B 625 ALA B 637 1 13 HELIX 13 AB4 ILE B 1014 ARG B 1033 1 20 HELIX 14 AB5 LYS B 1043 GLN B 1056 1 14 HELIX 15 AB6 SER B 1067 TYR B 1078 1 12 HELIX 16 AB7 GLY B 1082 ALA B 1094 1 13 HELIX 17 AB8 THR B 1129 ARG B 1137 1 9 HELIX 18 AB9 PRO B 1165 GLY B 1171 1 7 HELIX 19 AC1 ASN B 1187 LYS B 1200 1 14 HELIX 20 AC2 SER B 1205 MET B 1210 1 6 HELIX 21 AC3 LYS B 1227 GLY B 1237 1 11 HELIX 22 AC4 ASN B 1269 ASP B 1283 1 15 HELIX 23 AC5 ASN B 1313 THR B 1325 1 13 HELIX 24 AC6 ASN B 1347 HIS B 1390 1 44 HELIX 25 AC7 HIS B 1390 GLU B 1400 1 11 HELIX 26 AC8 THR B 1403 LYS B 1416 1 14 HELIX 27 AC9 SER B 1418 MET B 1428 1 11 HELIX 28 AD1 ARG B 1429 THR B 1434 5 6 HELIX 29 AD2 LEU B 1436 ALA B 1460 1 25 HELIX 30 AD3 ASP B 1461 GLY B 1481 1 21 HELIX 31 AD4 SER D 425 GLU D 428 5 4 HELIX 32 AD5 GLY D 436 ARG D 447 1 12 HELIX 33 AD6 ARG D 468 ASN D 474 1 7 HELIX 34 AD7 ASN D 475 GLY D 486 1 12 HELIX 35 AD8 ILE D 489 PHE D 493 5 5 HELIX 36 AD9 ASP D 494 ALA D 498 5 5 HELIX 37 AE1 ASP D 510 MET D 528 1 19 HELIX 38 AE2 MET D 528 ALA D 534 1 7 HELIX 39 AE3 GLY D 582 MET D 586 5 5 HELIX 40 AE4 ASN D 587 MET D 596 1 10 HELIX 41 AE5 ASP D 610 GLY D 623 1 14 HELIX 42 AE6 VAL D 625 ALA D 637 1 13 HELIX 43 AE7 ILE D 1014 ARG D 1033 1 20 HELIX 44 AE8 LYS D 1043 GLN D 1056 1 14 HELIX 45 AE9 SER D 1067 TYR D 1078 1 12 HELIX 46 AF1 GLY D 1082 ALA D 1094 1 13 HELIX 47 AF2 THR D 1129 ARG D 1137 1 9 HELIX 48 AF3 PRO D 1165 GLY D 1171 1 7 HELIX 49 AF4 ASN D 1187 ASN D 1201 1 15 HELIX 50 AF5 SER D 1205 MET D 1210 1 6 HELIX 51 AF6 LYS D 1227 GLY D 1237 1 11 HELIX 52 AF7 ASN D 1269 ASP D 1283 1 15 HELIX 53 AF8 ASN D 1313 THR D 1325 1 13 HELIX 54 AF9 ASN D 1347 HIS D 1390 1 44 HELIX 55 AG1 HIS D 1390 GLU D 1400 1 11 HELIX 56 AG2 THR D 1403 LYS D 1416 1 14 HELIX 57 AG3 SER D 1418 MET D 1428 1 11 HELIX 58 AG4 ARG D 1429 LEU D 1433 5 5 HELIX 59 AG5 THR D 1434 ASP D 1461 1 28 HELIX 60 AG6 ASP D 1461 GLY D 1481 1 21 SHEET 1 AA1 6 GLN B 452 LEU B 457 0 SHEET 2 AA1 6 GLU B 430 GLU B 435 1 N GLU B 430 O ALA B 453 SHEET 3 AA1 6 LYS B 502 MET B 506 1 O VAL B 504 N ILE B 431 SHEET 4 AA1 6 VAL B 537 ILE B 539 1 O TYR B 538 N ILE B 505 SHEET 5 AA1 6 LEU B 604 LYS B 607 -1 O VAL B 606 N VAL B 537 SHEET 6 AA1 6 GLU B1011 ASN B1013 1 O ARG B1012 N GLN B 605 SHEET 1 AA2 3 LYS B1065 LYS B1066 0 SHEET 2 AA2 3 GLU B1125 MET B1128 -1 O ALA B1126 N LYS B1065 SHEET 3 AA2 3 VAL B1104 GLN B1107 -1 N ASP B1105 O ARG B1127 SHEET 1 AA3 2 PHE B1146 ASP B1148 0 SHEET 2 AA3 2 ARG B1155 PRO B1157 -1 O GLU B1156 N ILE B1147 SHEET 1 AA4 2 ALA B1172 ILE B1175 0 SHEET 2 AA4 2 ALA B1180 ILE B1183 -1 O ILE B1183 N ALA B1172 SHEET 1 AA5 4 GLN B1328 ASN B1334 0 SHEET 2 AA5 4 ARG B1238 ARG B1244 -1 N GLY B1239 O VAL B1333 SHEET 3 AA5 4 LEU B1223 LEU B1225 -1 N LEU B1223 O ARG B1244 SHEET 4 AA5 4 GLU B1487 GLN B1489 1 O GLN B1489 N ILE B1224 SHEET 1 AA6 4 ARG B1246 GLY B1253 0 SHEET 2 AA6 4 ARG B1256 GLU B1263 -1 O ARG B1258 N GLU B1250 SHEET 3 AA6 4 VAL B1304 VAL B1308 -1 O VAL B1304 N VAL B1261 SHEET 4 AA6 4 ILE B1289 ASP B1294 -1 N ARG B1293 O VAL B1305 SHEET 1 AA7 2 ILE B1336 VAL B1339 0 SHEET 2 AA7 2 ARG B1342 LEU B1345 -1 O ARG B1342 N VAL B1339 SHEET 1 AA8 6 GLN D 452 PRO D 456 0 SHEET 2 AA8 6 GLU D 430 VAL D 434 1 N GLU D 430 O ALA D 453 SHEET 3 AA8 6 LYS D 502 ILE D 505 1 O VAL D 504 N LEU D 433 SHEET 4 AA8 6 VAL D 537 ILE D 539 1 O TYR D 538 N ILE D 503 SHEET 5 AA8 6 LEU D 604 LYS D 607 -1 O VAL D 606 N VAL D 537 SHEET 6 AA8 6 GLU D1011 ASN D1013 1 O ARG D1012 N GLN D 605 SHEET 1 AA9 3 LYS D1065 LYS D1066 0 SHEET 2 AA9 3 GLU D1125 MET D1128 -1 O ALA D1126 N LYS D1065 SHEET 3 AA9 3 VAL D1104 GLN D1107 -1 N ASP D1105 O ARG D1127 SHEET 1 AB1 2 PHE D1146 ASP D1148 0 SHEET 2 AB1 2 ARG D1155 PRO D1157 -1 O GLU D1156 N ILE D1147 SHEET 1 AB2 2 ALA D1172 ILE D1175 0 SHEET 2 AB2 2 ALA D1180 ILE D1183 -1 O ILE D1183 N ALA D1172 SHEET 1 AB3 4 GLN D1328 ASN D1334 0 SHEET 2 AB3 4 ARG D1238 ARG D1244 -1 N ILE D1241 O PHE D1331 SHEET 3 AB3 4 LEU D1223 LEU D1225 -1 N LEU D1223 O ARG D1244 SHEET 4 AB3 4 GLU D1487 GLN D1489 1 O GLN D1489 N ILE D1224 SHEET 1 AB4 4 ARG D1246 GLY D1253 0 SHEET 2 AB4 4 ARG D1256 GLU D1263 -1 O ARG D1258 N GLU D1250 SHEET 3 AB4 4 VAL D1304 VAL D1308 -1 O VAL D1304 N VAL D1261 SHEET 4 AB4 4 ILE D1289 ASP D1294 -1 N ARG D1293 O VAL D1305 SHEET 1 AB5 2 ILE D1336 VAL D1339 0 SHEET 2 AB5 2 ARG D1342 LEU D1345 -1 O ARG D1342 N VAL D1339 LINK OD2 ASP B 508 MN MN B1702 1555 1555 2.06 LINK OD2 ASP B 510 MN MN B1702 1555 1555 1.97 LINK MN MN B1702 O HOH B1815 1555 1555 1.99 LINK MN MN B1702 O HOH B1834 1555 1555 2.00 LINK MN MN B1702 O HOH B1861 1555 1555 2.01 LINK MN MN B1702 O HOH B1869 1555 1555 1.98 LINK OE2 GLU D 435 MN MN D1605 1555 1555 2.00 LINK OD2 ASP D 508 MN MN D1605 1555 1555 1.98 LINK NE2 HIS D1390 MN MN D1606 1555 1555 2.04 LINK MN MN D1605 O HOH D1705 1555 1555 2.02 LINK MN MN D1605 O HOH D1777 1555 1555 2.01 LINK MN MN D1605 OP2 DG H2009 1555 1555 1.98 LINK MN MN D1606 O HOH D1836 1555 1555 1.98 LINK MN MN D1606 O HOH D1840 1555 1555 2.00 LINK MN MN D1606 O HOH D1853 1555 1555 1.99 LINK MN MN D1606 O HOH E1702 1555 1445 2.01 LINK MN MN D1606 O HOH E1707 1555 1445 1.98 LINK O HOH E1704 MN MN G2102 1555 1555 1.99 LINK O HOH E1708 MN MN G2102 1555 1555 2.02 LINK N7 DG G2009 MN MN G2102 1555 1555 2.10 LINK MN MN G2102 O HOH G2201 1555 1555 1.99 LINK MN MN G2102 O HOH G2204 1555 1555 1.98 LINK MN MN G2102 O HOH G2208 1555 1555 1.99 SITE 1 AC1 8 ASN B1182 GLN B1267 VAL B1268 ASN B1269 SITE 2 AC1 8 ARG B1272 PRO B1326 DC E 3 DC E 4 SITE 1 AC2 6 ASP B 508 ASP B 510 HOH B1815 HOH B1834 SITE 2 AC2 6 HOH B1861 HOH B1869 SITE 1 AC3 2 GLN D1267 DC F 4 SITE 1 AC4 4 ARG D 630 MET D1179 PRO D1343 HOH D1791 SITE 1 AC5 9 ASN D1182 GLN D1267 VAL D1268 ASN D1269 SITE 2 AC5 9 ARG D1272 PRO D1326 HOH D1792 DC F 3 SITE 3 AC5 9 DC F 4 SITE 1 AC6 1 ARG D1429 SITE 1 AC7 6 GLU D 435 ASP D 508 HOH D1705 HOH D1777 SITE 2 AC7 6 DG F 8 DG H2009 SITE 1 AC8 7 HIS D1390 HOH D1836 HOH D1840 HOH D1853 SITE 2 AC8 7 DA E 1 HOH E1702 HOH E1707 SITE 1 AC9 1 DC E 4 SITE 1 AD1 8 ASP B1083 MET B1121 ALA D1068 ASP D1083 SITE 2 AD1 8 DT G2010 DA G2011 DT H2010 DA H2011 SITE 1 AD2 6 HOH E1704 HOH E1708 DG G2009 HOH G2201 SITE 2 AD2 6 HOH G2204 HOH G2208 CRYST1 92.592 92.592 405.464 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010800 0.006235 0.000000 0.00000 SCALE2 0.000000 0.012471 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002466 0.00000