PDB Short entry for 7B4X HEADER HYDROLASE 02-DEC-20 7B4X TITLE NOTUM COMPLEX WITH ARUK3002697 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PALMITOLEOYL-PROTEIN CARBOXYLESTERASE NOTUM; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HNOTUM; COMPND 5 EC: 3.1.1.98; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NOTUM, OK/SW-CL.30; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS NOTUM INHIBITOR COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.Y.JONES,P.FISH REVDAT 3 31-JAN-24 7B4X 1 REMARK REVDAT 2 27-JUL-22 7B4X 1 JRNL REVDAT 1 12-JAN-22 7B4X 0 JRNL AUTH Y.ZHAO,W.MAHY,N.J.WILLIS,H.L.WOODWARD,D.STEADMAN,E.D.BAYLE, JRNL AUTH 2 B.N.ATKINSON,J.SIPTHORP,L.VECCHIA,R.R.RUZA,K.HARLOS, JRNL AUTH 3 F.JEGANATHAN,S.CONSTANTINOU,A.COSTA,S.KJAER,M.BICTASH, JRNL AUTH 4 P.C.SALINAS,P.WHITING,J.P.VINCENT,P.V.FISH,E.Y.JONES JRNL TITL STRUCTURAL ANALYSIS AND DEVELOPMENT OF NOTUM FRAGMENT JRNL TITL 2 SCREENING HITS. JRNL REF ACS CHEM NEUROSCI V. 13 2060 2022 JRNL REFN ESSN 1948-7193 JRNL PMID 35731924 JRNL DOI 10.1021/ACSCHEMNEURO.2C00325 REMARK 2 REMARK 2 RESOLUTION. 1.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 93929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 4576 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.2100 - 3.8500 1.00 3277 169 0.1802 0.2177 REMARK 3 2 3.8500 - 3.0600 1.00 3128 163 0.1820 0.1928 REMARK 3 3 3.0600 - 2.6700 1.00 3093 162 0.1952 0.2079 REMARK 3 4 2.6700 - 2.4300 1.00 3081 164 0.1962 0.1942 REMARK 3 5 2.4300 - 2.2500 1.00 3067 162 0.1936 0.2011 REMARK 3 6 2.2500 - 2.1200 1.00 3052 164 0.1853 0.2022 REMARK 3 7 2.1200 - 2.0100 1.00 3047 162 0.1899 0.2370 REMARK 3 8 2.0100 - 1.9300 1.00 3055 152 0.1889 0.2066 REMARK 3 9 1.9300 - 1.8500 1.00 3008 167 0.1976 0.2329 REMARK 3 10 1.8500 - 1.7900 1.00 3042 156 0.2020 0.1828 REMARK 3 11 1.7900 - 1.7300 1.00 3053 140 0.1918 0.2265 REMARK 3 12 1.7300 - 1.6800 1.00 3040 144 0.1949 0.2270 REMARK 3 13 1.6800 - 1.6400 1.00 3024 151 0.1939 0.2077 REMARK 3 14 1.6400 - 1.6000 1.00 3020 149 0.2003 0.2120 REMARK 3 15 1.6000 - 1.5600 1.00 3020 153 0.2013 0.1969 REMARK 3 16 1.5600 - 1.5300 1.00 3020 165 0.2116 0.2345 REMARK 3 17 1.5300 - 1.5000 1.00 3012 155 0.2193 0.2808 REMARK 3 18 1.5000 - 1.4700 1.00 3027 157 0.2402 0.2294 REMARK 3 19 1.4700 - 1.4400 1.00 2962 174 0.2589 0.2681 REMARK 3 20 1.4400 - 1.4200 1.00 3003 171 0.2810 0.2905 REMARK 3 21 1.4200 - 1.4000 1.00 3032 155 0.2947 0.3074 REMARK 3 22 1.4000 - 1.3800 1.00 3006 144 0.3036 0.3058 REMARK 3 23 1.3800 - 1.3600 1.00 3001 146 0.3020 0.2877 REMARK 3 24 1.3600 - 1.3400 0.99 2984 150 0.3275 0.3266 REMARK 3 25 1.3400 - 1.3200 0.99 2953 162 0.3293 0.3223 REMARK 3 26 1.3200 - 1.3000 0.97 2942 128 0.3574 0.3439 REMARK 3 27 1.3000 - 1.2800 0.96 2886 135 0.3543 0.3466 REMARK 3 28 1.2800 - 1.2700 0.90 2722 143 0.3655 0.3330 REMARK 3 29 1.2700 - 1.2500 0.88 2631 129 0.3667 0.3648 REMARK 3 30 1.2500 - 1.2400 0.71 2165 104 0.3701 0.4062 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -4.7760 1.5689 -3.0428 REMARK 3 T TENSOR REMARK 3 T11: 0.1307 T22: 0.1391 REMARK 3 T33: 0.1327 T12: -0.0056 REMARK 3 T13: 0.0065 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.6826 L22: 1.0304 REMARK 3 L33: 0.7160 L12: 0.0442 REMARK 3 L13: 0.1421 L23: 0.0926 REMARK 3 S TENSOR REMARK 3 S11: -0.0181 S12: -0.0100 S13: -0.0309 REMARK 3 S21: 0.0268 S22: 0.0097 S23: -0.0052 REMARK 3 S31: 0.0839 S32: -0.0084 S33: 0.0095 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7B4X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1292112616. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 95744 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.240 REMARK 200 RESOLUTION RANGE LOW (A) : 77.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.26 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 7ARG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULPHATE 0.1 M SODIUM REMARK 280 CITRATE, PH 4.2, EVAPORATION, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.59650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.86500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.49750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.86500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.59650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.49750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMER REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMER REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 78 REMARK 465 THR A 79 REMARK 465 GLY A 80 REMARK 465 SER A 81 REMARK 465 ALA A 82 REMARK 465 GLN A 83 REMARK 465 GLN A 84 REMARK 465 LEU A 85 REMARK 465 ASN A 86 REMARK 465 GLU A 87 REMARK 465 THR A 277 REMARK 465 ASP A 278 REMARK 465 CYS A 279 REMARK 465 VAL A 280 REMARK 465 ASP A 281 REMARK 465 THR A 282 REMARK 465 ILE A 283 REMARK 465 THR A 284 REMARK 465 CYS A 285 REMARK 465 ALA A 286 REMARK 465 PRO A 287 REMARK 465 THR A 352 REMARK 465 GLY A 353 REMARK 465 GLN A 354 REMARK 465 ASP A 420 REMARK 465 SER A 421 REMARK 465 HIS A 422 REMARK 465 LYS A 423 REMARK 465 ALA A 424 REMARK 465 SER A 425 REMARK 465 LYS A 426 REMARK 465 GLY A 452 REMARK 465 THR A 453 REMARK 465 LYS A 454 REMARK 465 HIS A 455 REMARK 465 HIS A 456 REMARK 465 HIS A 457 REMARK 465 HIS A 458 REMARK 465 HIS A 459 REMARK 465 HIS A 460 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 134 CG CD OE1 OE2 REMARK 470 ARG A 150 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 196 CG CD OE1 OE2 REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 ARG A 213 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 247 CG CD OE1 OE2 REMARK 470 GLU A 250 CG CD OE1 OE2 REMARK 470 ARG A 292 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 296 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 369 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 376 CG CD CE NZ REMARK 470 LYS A 430 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 90 O1 SO4 A 505 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 115 CD - NE - CZ ANGL. DEV. = 16.4 DEGREES REMARK 500 ARG A 115 NE - CZ - NH1 ANGL. DEV. = -4.4 DEGREES REMARK 500 ASP A 141 CB - CG - OD1 ANGL. DEV. = 13.7 DEGREES REMARK 500 ASP A 141 CB - CG - OD2 ANGL. DEV. = -15.1 DEGREES REMARK 500 ARG A 154 CD - NE - CZ ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG A 154 NE - CZ - NH1 ANGL. DEV. = -19.5 DEGREES REMARK 500 ARG A 154 NE - CZ - NH2 ANGL. DEV. = 4.7 DEGREES REMARK 500 LEU A 371 CB - CG - CD1 ANGL. DEV. = 12.0 DEGREES REMARK 500 LEU A 371 CB - CG - CD2 ANGL. DEV. = -23.0 DEGREES REMARK 500 CYS A 445 CA - CB - SG ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 101 -178.42 -69.11 REMARK 500 TRP A 128 -136.25 53.14 REMARK 500 MET A 143 40.93 -141.87 REMARK 500 TYR A 171 -74.38 -81.03 REMARK 500 ALA A 191 52.76 -148.44 REMARK 500 SER A 232 -114.41 52.71 REMARK 500 GLN A 311 -172.16 67.72 REMARK 500 LEU A 371 -64.34 -24.24 REMARK 500 HIS A 444 17.98 80.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 115 0.14 SIDE CHAIN REMARK 500 ASP A 141 0.10 SIDE CHAIN REMARK 500 ARG A 154 0.16 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 7B4X A 81 451 UNP Q6P988 NOTUM_HUMAN 81 451 SEQADV 7B4X GLU A 78 UNP Q6P988 CLONING ARTIFACT SEQADV 7B4X THR A 79 UNP Q6P988 CLONING ARTIFACT SEQADV 7B4X GLY A 80 UNP Q6P988 CLONING ARTIFACT SEQADV 7B4X SER A 330 UNP Q6P988 CYS 330 ENGINEERED MUTATION SEQADV 7B4X GLY A 452 UNP Q6P988 EXPRESSION TAG SEQADV 7B4X THR A 453 UNP Q6P988 EXPRESSION TAG SEQADV 7B4X LYS A 454 UNP Q6P988 EXPRESSION TAG SEQADV 7B4X HIS A 455 UNP Q6P988 EXPRESSION TAG SEQADV 7B4X HIS A 456 UNP Q6P988 EXPRESSION TAG SEQADV 7B4X HIS A 457 UNP Q6P988 EXPRESSION TAG SEQADV 7B4X HIS A 458 UNP Q6P988 EXPRESSION TAG SEQADV 7B4X HIS A 459 UNP Q6P988 EXPRESSION TAG SEQADV 7B4X HIS A 460 UNP Q6P988 EXPRESSION TAG SEQRES 1 A 383 GLU THR GLY SER ALA GLN GLN LEU ASN GLU ASP LEU ARG SEQRES 2 A 383 LEU HIS LEU LEU LEU ASN THR SER VAL THR CYS ASN ASP SEQRES 3 A 383 GLY SER PRO ALA GLY TYR TYR LEU LYS GLU SER ARG GLY SEQRES 4 A 383 SER ARG ARG TRP LEU LEU PHE LEU GLU GLY GLY TRP TYR SEQRES 5 A 383 CYS PHE ASN ARG GLU ASN CYS ASP SER ARG TYR ASP THR SEQRES 6 A 383 MET ARG ARG LEU MET SER SER ARG ASP TRP PRO ARG THR SEQRES 7 A 383 ARG THR GLY THR GLY ILE LEU SER SER GLN PRO GLU GLU SEQRES 8 A 383 ASN PRO TYR TRP TRP ASN ALA ASN MET VAL PHE ILE PRO SEQRES 9 A 383 TYR CYS SER SER ASP VAL TRP SER GLY ALA SER SER LYS SEQRES 10 A 383 SER GLU LYS ASN GLU TYR ALA PHE MET GLY ALA LEU ILE SEQRES 11 A 383 ILE GLN GLU VAL VAL ARG GLU LEU LEU GLY ARG GLY LEU SEQRES 12 A 383 SER GLY ALA LYS VAL LEU LEU LEU ALA GLY SER SER ALA SEQRES 13 A 383 GLY GLY THR GLY VAL LEU LEU ASN VAL ASP ARG VAL ALA SEQRES 14 A 383 GLU GLN LEU GLU LYS LEU GLY TYR PRO ALA ILE GLN VAL SEQRES 15 A 383 ARG GLY LEU ALA ASP SER GLY TRP PHE LEU ASP ASN LYS SEQRES 16 A 383 GLN TYR ARG HIS THR ASP CYS VAL ASP THR ILE THR CYS SEQRES 17 A 383 ALA PRO THR GLU ALA ILE ARG ARG GLY ILE ARG TYR TRP SEQRES 18 A 383 ASN GLY VAL VAL PRO GLU ARG CYS ARG ARG GLN PHE GLN SEQRES 19 A 383 GLU GLY GLU GLU TRP ASN CYS PHE PHE GLY TYR LYS VAL SEQRES 20 A 383 TYR PRO THR LEU ARG SER PRO VAL PHE VAL VAL GLN TRP SEQRES 21 A 383 LEU PHE ASP GLU ALA GLN LEU THR VAL ASP ASN VAL HIS SEQRES 22 A 383 LEU THR GLY GLN PRO VAL GLN GLU GLY LEU ARG LEU TYR SEQRES 23 A 383 ILE GLN ASN LEU GLY ARG GLU LEU ARG HIS THR LEU LYS SEQRES 24 A 383 ASP VAL PRO ALA SER PHE ALA PRO ALA CYS LEU SER HIS SEQRES 25 A 383 GLU ILE ILE ILE ARG SER HIS TRP THR ASP VAL GLN VAL SEQRES 26 A 383 LYS GLY THR SER LEU PRO ARG ALA LEU HIS CYS TRP ASP SEQRES 27 A 383 ARG SER LEU HIS ASP SER HIS LYS ALA SER LYS THR PRO SEQRES 28 A 383 LEU LYS GLY CYS PRO VAL HIS LEU VAL ASP SER CYS PRO SEQRES 29 A 383 TRP PRO HIS CYS ASN PRO SER CYS PRO THR GLY THR LYS SEQRES 30 A 383 HIS HIS HIS HIS HIS HIS HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET DMS A 506 4 HET DMS A 507 4 HET DMS A 508 4 HET EDO A 509 4 HET EDO A 510 4 HET EDO A 511 4 HET SWT A 512 18 HET EDO A 513 4 HET SO4 A 514 5 HET SO4 A 515 5 HETNAM SO4 SULFATE ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM SWT 6-(4-METHYLPHENYL)SULFANYL-2~{H}-[1,2,4]TRIAZOLO[4,3- HETNAM 2 SWT B]PYRIDAZIN-3-ONE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 SO4 7(O4 S 2-) FORMUL 7 DMS 3(C2 H6 O S) FORMUL 10 EDO 4(C2 H6 O2) FORMUL 13 SWT C12 H10 N4 O S FORMUL 17 HOH *128(H2 O) HELIX 1 AA1 ASN A 132 MET A 143 1 12 HELIX 2 AA2 ARG A 144 MET A 147 5 4 HELIX 3 AA3 THR A 159 SER A 163 5 5 HELIX 4 AA4 MET A 203 GLY A 217 1 15 HELIX 5 AA5 ARG A 218 ALA A 223 5 6 HELIX 6 AA6 SER A 232 LEU A 252 1 21 HELIX 7 AA7 GLU A 289 ASN A 299 1 11 HELIX 8 AA8 PRO A 303 GLN A 311 1 9 HELIX 9 AA9 GLU A 314 PHE A 319 5 6 HELIX 10 AB1 PHE A 320 TYR A 325 1 6 HELIX 11 AB2 PRO A 326 LEU A 328 5 3 HELIX 12 AB3 GLU A 341 ASP A 347 1 7 HELIX 13 AB4 GLN A 357 LEU A 375 1 19 HELIX 14 AB5 LEU A 407 LEU A 418 1 12 SHEET 1 AA110 THR A 155 ARG A 156 0 SHEET 2 AA110 LEU A 89 LEU A 93 -1 N LEU A 89 O ARG A 156 SHEET 3 AA110 GLY A 108 LYS A 112 -1 O TYR A 109 N HIS A 92 SHEET 4 AA110 ASN A 176 ILE A 180 -1 O PHE A 179 N TYR A 110 SHEET 5 AA110 ARG A 119 LEU A 124 1 N PHE A 123 O ILE A 180 SHEET 6 AA110 VAL A 225 SER A 231 1 O LEU A 227 N TRP A 120 SHEET 7 AA110 GLN A 258 ASP A 264 1 O ARG A 260 N LEU A 228 SHEET 8 AA110 VAL A 332 VAL A 335 1 O VAL A 335 N ALA A 263 SHEET 9 AA110 SER A 381 ALA A 383 1 O PHE A 382 N VAL A 334 SHEET 10 AA110 HIS A 435 VAL A 437 1 O LEU A 436 N ALA A 383 SHEET 1 AA2 2 PHE A 339 ASP A 340 0 SHEET 2 AA2 2 LEU A 387 SER A 388 1 O SER A 388 N PHE A 339 SHEET 1 AA3 2 GLN A 401 VAL A 402 0 SHEET 2 AA3 2 THR A 405 SER A 406 -1 O THR A 405 N VAL A 402 SSBOND 1 CYS A 101 CYS A 183 1555 1555 2.03 SSBOND 2 CYS A 130 CYS A 136 1555 1555 2.03 SSBOND 3 CYS A 306 CYS A 318 1555 1555 2.04 SSBOND 4 CYS A 386 CYS A 449 1555 1555 2.03 SSBOND 5 CYS A 413 CYS A 432 1555 1555 2.03 SSBOND 6 CYS A 440 CYS A 445 1555 1555 2.05 CRYST1 59.193 72.995 77.730 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016894 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013700 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012865 0.00000