PDB Short entry for 7JSL HEADER DNA BINDING PROTEIN/DNA 14-AUG-20 7JSL TITLE CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TRANSCRIPTION TITLE 2 FACTOR ERF IN THE OXIDIZED FORM, IN COMPLEX WITH DOUBLE-STRANDED DNA TITLE 3 ACCGGAAGTG COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3'); COMPND 3 CHAIN: B, A, F, I; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: SYNTHETIC DNA; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3'); COMPND 8 CHAIN: C, D, G, K; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: SYNTHETIC DNA; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: ETS DOMAIN-CONTAINING TRANSCRIPTION FACTOR ERF; COMPND 13 CHAIN: J, E, H, L; COMPND 14 SYNONYM: ETS2 REPRESSOR FACTOR,PE-2; COMPND 15 ENGINEERED: YES; COMPND 16 OTHER_DETAILS: THE N-TERMINAL REGION GPHM IS A LEFTOVER AFTER COMPND 17 AFFINITY TAG CLEAVAGE. THE C-TERMINAL REGION KLVL...SGSS IS COMPND 18 DISORDERED. SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: ERF; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TRANSCRIPTION, TUMOR SUPPRESSOR, ETS FAMILY, REPRESSOR, DNA BINDING KEYWDS 2 PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.HOU,O.V.TSODIKOV REVDAT 2 18-OCT-23 7JSL 1 REMARK REVDAT 1 25-NOV-20 7JSL 0 JRNL AUTH C.HOU,C.MCCOWN,D.N.IVANOV,O.V.TSODIKOV JRNL TITL STRUCTURAL INSIGHT INTO THE DNA BINDING FUNCTION OF JRNL TITL 2 TRANSCRIPTION FACTOR ERF. JRNL REF BIOCHEMISTRY 2020 JRNL REFN ISSN 0006-2960 JRNL PMID 33175491 JRNL DOI 10.1021/ACS.BIOCHEM.0C00774 REMARK 2 REMARK 2 RESOLUTION. 4.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 8243 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 434 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.51 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.63 REMARK 3 REFLECTION IN BIN (WORKING SET) : 563 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.3670 REMARK 3 BIN FREE R VALUE SET COUNT : 19 REMARK 3 BIN FREE R VALUE : 0.4480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2888 REMARK 3 NUCLEIC ACID ATOMS : 1612 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 212.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.08000 REMARK 3 B22 (A**2) : 1.20000 REMARK 3 B33 (A**2) : 1.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.899 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.784 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 71.617 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4778 ; 0.003 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3679 ; 0.002 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6763 ; 1.087 ; 1.453 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8533 ; 1.213 ; 1.942 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 325 ; 6.448 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 192 ;34.688 ;20.625 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 558 ;18.025 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;15.548 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 574 ; 0.050 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4223 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1173 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7JSL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1000251311. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8678 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.58 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7JSA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 4000, 0.1M HEPES PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 63.76850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.23200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 87.45700 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 63.76850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.23200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 87.45700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 63.76850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 64.23200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 87.45700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 63.76850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 64.23200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 87.45700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY J 18 REMARK 465 PRO J 19 REMARK 465 HIS J 20 REMARK 465 MET J 21 REMARK 465 PRO J 22 REMARK 465 GLY J 23 REMARK 465 SER J 24 REMARK 465 ARG J 25 REMARK 465 GLN J 26 REMARK 465 ILE J 27 REMARK 465 LYS J 110 REMARK 465 LEU J 111 REMARK 465 VAL J 112 REMARK 465 LEU J 113 REMARK 465 VAL J 114 REMARK 465 ASN J 115 REMARK 465 TYR J 116 REMARK 465 PRO J 117 REMARK 465 PHE J 118 REMARK 465 ILE J 119 REMARK 465 ASP J 120 REMARK 465 VAL J 121 REMARK 465 GLY J 122 REMARK 465 LEU J 123 REMARK 465 ALA J 124 REMARK 465 GLY J 125 REMARK 465 GLY J 126 REMARK 465 ALA J 127 REMARK 465 VAL J 128 REMARK 465 PRO J 129 REMARK 465 GLN J 130 REMARK 465 SER J 131 REMARK 465 ALA J 132 REMARK 465 PRO J 133 REMARK 465 PRO J 134 REMARK 465 VAL J 135 REMARK 465 PRO J 136 REMARK 465 SER J 137 REMARK 465 GLY J 138 REMARK 465 GLY J 139 REMARK 465 SER J 140 REMARK 465 GLY E 18 REMARK 465 PRO E 19 REMARK 465 HIS E 20 REMARK 465 MET E 21 REMARK 465 PRO E 22 REMARK 465 GLY E 23 REMARK 465 SER E 24 REMARK 465 ARG E 25 REMARK 465 GLN E 26 REMARK 465 ILE E 27 REMARK 465 LYS E 110 REMARK 465 LEU E 111 REMARK 465 VAL E 112 REMARK 465 LEU E 113 REMARK 465 VAL E 114 REMARK 465 ASN E 115 REMARK 465 TYR E 116 REMARK 465 PRO E 117 REMARK 465 PHE E 118 REMARK 465 ILE E 119 REMARK 465 ASP E 120 REMARK 465 VAL E 121 REMARK 465 GLY E 122 REMARK 465 LEU E 123 REMARK 465 ALA E 124 REMARK 465 GLY E 125 REMARK 465 GLY E 126 REMARK 465 ALA E 127 REMARK 465 VAL E 128 REMARK 465 PRO E 129 REMARK 465 GLN E 130 REMARK 465 SER E 131 REMARK 465 ALA E 132 REMARK 465 PRO E 133 REMARK 465 PRO E 134 REMARK 465 VAL E 135 REMARK 465 PRO E 136 REMARK 465 SER E 137 REMARK 465 GLY E 138 REMARK 465 GLY E 139 REMARK 465 SER E 140 REMARK 465 GLY H 18 REMARK 465 PRO H 19 REMARK 465 HIS H 20 REMARK 465 MET H 21 REMARK 465 PRO H 22 REMARK 465 GLY H 23 REMARK 465 SER H 24 REMARK 465 ARG H 25 REMARK 465 GLN H 26 REMARK 465 LYS H 110 REMARK 465 LEU H 111 REMARK 465 VAL H 112 REMARK 465 LEU H 113 REMARK 465 VAL H 114 REMARK 465 ASN H 115 REMARK 465 TYR H 116 REMARK 465 PRO H 117 REMARK 465 PHE H 118 REMARK 465 ILE H 119 REMARK 465 ASP H 120 REMARK 465 VAL H 121 REMARK 465 GLY H 122 REMARK 465 LEU H 123 REMARK 465 ALA H 124 REMARK 465 GLY H 125 REMARK 465 GLY H 126 REMARK 465 ALA H 127 REMARK 465 VAL H 128 REMARK 465 PRO H 129 REMARK 465 GLN H 130 REMARK 465 SER H 131 REMARK 465 ALA H 132 REMARK 465 PRO H 133 REMARK 465 PRO H 134 REMARK 465 VAL H 135 REMARK 465 PRO H 136 REMARK 465 SER H 137 REMARK 465 GLY H 138 REMARK 465 GLY H 139 REMARK 465 SER H 140 REMARK 465 GLY L 18 REMARK 465 PRO L 19 REMARK 465 HIS L 20 REMARK 465 MET L 21 REMARK 465 PRO L 22 REMARK 465 GLY L 23 REMARK 465 SER L 24 REMARK 465 ARG L 25 REMARK 465 GLN L 26 REMARK 465 ILE L 27 REMARK 465 LYS L 110 REMARK 465 LEU L 111 REMARK 465 VAL L 112 REMARK 465 LEU L 113 REMARK 465 VAL L 114 REMARK 465 ASN L 115 REMARK 465 TYR L 116 REMARK 465 PRO L 117 REMARK 465 PHE L 118 REMARK 465 ILE L 119 REMARK 465 ASP L 120 REMARK 465 VAL L 121 REMARK 465 GLY L 122 REMARK 465 LEU L 123 REMARK 465 ALA L 124 REMARK 465 GLY L 125 REMARK 465 GLY L 126 REMARK 465 ALA L 127 REMARK 465 VAL L 128 REMARK 465 PRO L 129 REMARK 465 GLN L 130 REMARK 465 SER L 131 REMARK 465 ALA L 132 REMARK 465 PRO L 133 REMARK 465 PRO L 134 REMARK 465 VAL L 135 REMARK 465 PRO L 136 REMARK 465 SER L 137 REMARK 465 GLY L 138 REMARK 465 GLY L 139 REMARK 465 SER L 140 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DC C 14 O5' REMARK 470 DC D 14 O5' REMARK 470 DC G 14 O5' REMARK 470 DC K 14 O5' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU J 41 3.31 -63.36 REMARK 500 ASP J 51 -176.87 -69.56 REMARK 500 ASN J 107 73.96 -101.34 REMARK 500 ASP E 51 -167.95 -70.54 REMARK 500 ASP H 51 -167.27 -73.52 REMARK 500 ASP L 51 -171.55 -64.55 REMARK 500 CYS L 72 25.46 46.96 REMARK 500 REMARK 500 REMARK: NULL DBREF 7JSL B 2 11 PDB 7JSL 7JSL 2 11 DBREF 7JSL C 14 23 PDB 7JSL 7JSL 14 23 DBREF 7JSL J 22 140 UNP P50548 ERF_HUMAN 22 140 DBREF 7JSL A 2 11 PDB 7JSL 7JSL 2 11 DBREF 7JSL D 14 23 PDB 7JSL 7JSL 14 23 DBREF 7JSL E 22 140 UNP P50548 ERF_HUMAN 22 140 DBREF 7JSL F 2 11 PDB 7JSL 7JSL 2 11 DBREF 7JSL G 14 23 PDB 7JSL 7JSL 14 23 DBREF 7JSL H 22 140 UNP P50548 ERF_HUMAN 22 140 DBREF 7JSL I 2 11 PDB 7JSL 7JSL 2 11 DBREF 7JSL K 14 23 PDB 7JSL 7JSL 14 23 DBREF 7JSL L 22 140 UNP P50548 ERF_HUMAN 22 140 SEQADV 7JSL GLY J 18 UNP P50548 EXPRESSION TAG SEQADV 7JSL PRO J 19 UNP P50548 EXPRESSION TAG SEQADV 7JSL HIS J 20 UNP P50548 EXPRESSION TAG SEQADV 7JSL MET J 21 UNP P50548 EXPRESSION TAG SEQADV 7JSL GLY E 18 UNP P50548 EXPRESSION TAG SEQADV 7JSL PRO E 19 UNP P50548 EXPRESSION TAG SEQADV 7JSL HIS E 20 UNP P50548 EXPRESSION TAG SEQADV 7JSL MET E 21 UNP P50548 EXPRESSION TAG SEQADV 7JSL GLY H 18 UNP P50548 EXPRESSION TAG SEQADV 7JSL PRO H 19 UNP P50548 EXPRESSION TAG SEQADV 7JSL HIS H 20 UNP P50548 EXPRESSION TAG SEQADV 7JSL MET H 21 UNP P50548 EXPRESSION TAG SEQADV 7JSL GLY L 18 UNP P50548 EXPRESSION TAG SEQADV 7JSL PRO L 19 UNP P50548 EXPRESSION TAG SEQADV 7JSL HIS L 20 UNP P50548 EXPRESSION TAG SEQADV 7JSL MET L 21 UNP P50548 EXPRESSION TAG SEQRES 1 B 10 DA DC DC DG DG DA DA DG DT DG SEQRES 1 C 10 DC DA DC DT DT DC DC DG DG DT SEQRES 1 J 123 GLY PRO HIS MET PRO GLY SER ARG GLN ILE GLN LEU TRP SEQRES 2 J 123 HIS PHE ILE LEU GLU LEU LEU ARG LYS GLU GLU TYR GLN SEQRES 3 J 123 GLY VAL ILE ALA TRP GLN GLY ASP TYR GLY GLU PHE VAL SEQRES 4 J 123 ILE LYS ASP PRO ASP GLU VAL ALA ARG LEU TRP GLY VAL SEQRES 5 J 123 ARG LYS CYS LYS PRO GLN MET ASN TYR ASP LYS LEU SER SEQRES 6 J 123 ARG ALA LEU ARG TYR TYR TYR ASN LYS ARG ILE LEU HIS SEQRES 7 J 123 LYS THR LYS GLY LYS ARG PHE THR TYR LYS PHE ASN PHE SEQRES 8 J 123 ASN LYS LEU VAL LEU VAL ASN TYR PRO PHE ILE ASP VAL SEQRES 9 J 123 GLY LEU ALA GLY GLY ALA VAL PRO GLN SER ALA PRO PRO SEQRES 10 J 123 VAL PRO SER GLY GLY SER SEQRES 1 A 10 DA DC DC DG DG DA DA DG DT DG SEQRES 1 D 10 DC DA DC DT DT DC DC DG DG DT SEQRES 1 E 123 GLY PRO HIS MET PRO GLY SER ARG GLN ILE GLN LEU TRP SEQRES 2 E 123 HIS PHE ILE LEU GLU LEU LEU ARG LYS GLU GLU TYR GLN SEQRES 3 E 123 GLY VAL ILE ALA TRP GLN GLY ASP TYR GLY GLU PHE VAL SEQRES 4 E 123 ILE LYS ASP PRO ASP GLU VAL ALA ARG LEU TRP GLY VAL SEQRES 5 E 123 ARG LYS CYS LYS PRO GLN MET ASN TYR ASP LYS LEU SER SEQRES 6 E 123 ARG ALA LEU ARG TYR TYR TYR ASN LYS ARG ILE LEU HIS SEQRES 7 E 123 LYS THR LYS GLY LYS ARG PHE THR TYR LYS PHE ASN PHE SEQRES 8 E 123 ASN LYS LEU VAL LEU VAL ASN TYR PRO PHE ILE ASP VAL SEQRES 9 E 123 GLY LEU ALA GLY GLY ALA VAL PRO GLN SER ALA PRO PRO SEQRES 10 E 123 VAL PRO SER GLY GLY SER SEQRES 1 F 10 DA DC DC DG DG DA DA DG DT DG SEQRES 1 G 10 DC DA DC DT DT DC DC DG DG DT SEQRES 1 H 123 GLY PRO HIS MET PRO GLY SER ARG GLN ILE GLN LEU TRP SEQRES 2 H 123 HIS PHE ILE LEU GLU LEU LEU ARG LYS GLU GLU TYR GLN SEQRES 3 H 123 GLY VAL ILE ALA TRP GLN GLY ASP TYR GLY GLU PHE VAL SEQRES 4 H 123 ILE LYS ASP PRO ASP GLU VAL ALA ARG LEU TRP GLY VAL SEQRES 5 H 123 ARG LYS CYS LYS PRO GLN MET ASN TYR ASP LYS LEU SER SEQRES 6 H 123 ARG ALA LEU ARG TYR TYR TYR ASN LYS ARG ILE LEU HIS SEQRES 7 H 123 LYS THR LYS GLY LYS ARG PHE THR TYR LYS PHE ASN PHE SEQRES 8 H 123 ASN LYS LEU VAL LEU VAL ASN TYR PRO PHE ILE ASP VAL SEQRES 9 H 123 GLY LEU ALA GLY GLY ALA VAL PRO GLN SER ALA PRO PRO SEQRES 10 H 123 VAL PRO SER GLY GLY SER SEQRES 1 I 10 DA DC DC DG DG DA DA DG DT DG SEQRES 1 K 10 DC DA DC DT DT DC DC DG DG DT SEQRES 1 L 123 GLY PRO HIS MET PRO GLY SER ARG GLN ILE GLN LEU TRP SEQRES 2 L 123 HIS PHE ILE LEU GLU LEU LEU ARG LYS GLU GLU TYR GLN SEQRES 3 L 123 GLY VAL ILE ALA TRP GLN GLY ASP TYR GLY GLU PHE VAL SEQRES 4 L 123 ILE LYS ASP PRO ASP GLU VAL ALA ARG LEU TRP GLY VAL SEQRES 5 L 123 ARG LYS CYS LYS PRO GLN MET ASN TYR ASP LYS LEU SER SEQRES 6 L 123 ARG ALA LEU ARG TYR TYR TYR ASN LYS ARG ILE LEU HIS SEQRES 7 L 123 LYS THR LYS GLY LYS ARG PHE THR TYR LYS PHE ASN PHE SEQRES 8 L 123 ASN LYS LEU VAL LEU VAL ASN TYR PRO PHE ILE ASP VAL SEQRES 9 L 123 GLY LEU ALA GLY GLY ALA VAL PRO GLN SER ALA PRO PRO SEQRES 10 L 123 VAL PRO SER GLY GLY SER HELIX 1 AA1 GLN J 28 ARG J 38 1 11 HELIX 2 AA2 LYS J 39 GLN J 43 5 5 HELIX 3 AA3 ASP J 59 LYS J 71 1 13 HELIX 4 AA4 ASN J 77 LYS J 91 1 15 HELIX 5 AA5 LEU E 29 ARG E 38 1 10 HELIX 6 AA6 LYS E 39 GLN E 43 5 5 HELIX 7 AA7 ASP E 59 LYS E 71 1 13 HELIX 8 AA8 ASN E 77 TYR E 87 1 11 HELIX 9 AA9 GLN H 28 ARG H 38 1 11 HELIX 10 AB1 LYS H 39 GLN H 43 5 5 HELIX 11 AB2 ASP H 59 LYS H 71 1 13 HELIX 12 AB3 ASN H 77 ARG H 92 1 16 HELIX 13 AB4 LEU L 29 LEU L 37 1 9 HELIX 14 AB5 ARG L 38 GLN L 43 5 6 HELIX 15 AB6 ASP L 59 LYS L 71 1 13 HELIX 16 AB7 ASN L 77 ARG L 92 1 16 SHEET 1 AA1 4 ILE J 46 TRP J 48 0 SHEET 2 AA1 4 GLU J 54 ILE J 57 -1 O VAL J 56 N ALA J 47 SHEET 3 AA1 4 THR J 103 PHE J 106 -1 O TYR J 104 N PHE J 55 SHEET 4 AA1 4 LEU J 94 LYS J 96 -1 N HIS J 95 O LYS J 105 SHEET 1 AA2 4 ILE E 46 TRP E 48 0 SHEET 2 AA2 4 GLU E 54 ILE E 57 -1 O VAL E 56 N ALA E 47 SHEET 3 AA2 4 THR E 103 PHE E 106 -1 O TYR E 104 N PHE E 55 SHEET 4 AA2 4 LEU E 94 LYS E 96 -1 N HIS E 95 O LYS E 105 SHEET 1 AA3 4 ILE H 46 TRP H 48 0 SHEET 2 AA3 4 GLU H 54 ILE H 57 -1 O VAL H 56 N ALA H 47 SHEET 3 AA3 4 THR H 103 PHE H 106 -1 O TYR H 104 N PHE H 55 SHEET 4 AA3 4 LEU H 94 LYS H 96 -1 N HIS H 95 O LYS H 105 SHEET 1 AA4 4 ILE L 46 TRP L 48 0 SHEET 2 AA4 4 GLU L 54 ILE L 57 -1 O VAL L 56 N ALA L 47 SHEET 3 AA4 4 THR L 103 PHE L 106 -1 O TYR L 104 N PHE L 55 SHEET 4 AA4 4 LEU L 94 LYS L 96 -1 N HIS L 95 O LYS L 105 SSBOND 1 CYS J 72 CYS L 72 1555 1555 2.03 SSBOND 2 CYS E 72 CYS H 72 1555 1555 2.02 CRYST1 127.537 128.464 174.914 90.00 90.00 90.00 I 2 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007841 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007784 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005717 0.00000