HEADSC 1bnd COMMNT S2C correlation file created: Sat Oct 30 02:46:29 EDT 2004 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT www.fccc.edu/research/labs/dubrack/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD A H HIS --- 1 - - - 367 SEQCRD A S SER --- 2 - - - 367 SEQCRD A D ASP --- 3 - - - 367 SEQCRD A P PRO --- 4 - - - 367 SEQCRD A A ALA --- 5 - - - 367 SEQCRD A R ARG --- 6 - - - 367 SEQCRD A R ARG --- 7 - - - 367 SEQCRD A G GLY GLY 8 8 C C - SEQCRD A Q GLN GLN 9 9 C C - SEQCRD A L LEU LEU 10 10 C C - SEQCRD A S SER SER 11 11 C B 5 SEQCRD A V VAL VAL 12 12 C T 5 SEQCRD A C CYS CYS 13 13 C T 5 SEQCRD A D ASP ASP 14 14 C T 5 SEQCRD A S SER SER 15 15 E E - SEQCRD A I ILE ILE 16 16 E E - SEQCRD A S SER SER 17 17 E E - SEQCRD A E GLU GLU 18 18 E E - SEQCRD A W TRP TRP 19 19 E E - SEQCRD A V VAL VAL 20 20 E E - SEQCRD A T THR THR 21 21 E E - SEQCRD A A ALA ALA 22 22 H H - SEQCRD A A ALA ALA 23 23 H H - SEQCRD A D ASP ASP 24 24 H H - SEQCRD A K LYS LYS 25 25 H H - SEQCRD A K LYS LYS 26 26 C T 5 SEQCRD A T THR THR 27 27 E E - SEQCRD A A ALA ALA 28 28 E E - SEQCRD A V VAL VAL 29 29 E E - SEQCRD A D ASP ASP 30 30 C E 5 SEQCRD A M MET MET 31 31 C T 5 SEQCRD A S SER SER 32 32 C T 5 SEQCRD A G GLY GLY 33 33 C T 5 SEQCRD A G GLY GLY 34 34 C C - SEQCRD A T THR THR 35 35 E E - SEQCRD A V VAL VAL 36 36 E E - SEQCRD A T THR THR 37 37 E E - SEQCRD A V VAL VAL 38 38 C E 5 SEQCRD A L LEU LEU 39 39 C C - SEQCRD A E GLU GLU 40 40 C C - SEQCRD A K LYS LYS 41 41 E E - SEQCRD A V VAL VAL 42 42 E E - SEQCRD A P PRO PRO 43 43 E E - SEQCRD A V VAL VAL 44 44 C T 5 SEQCRD A S SER SER 45 45 C T 5 SEQCRD A K LYS LYS 46 46 C T 5 SEQCRD A G GLY GLY 47 47 C T 5 SEQCRD A Q GLN GLN 48 48 E E - SEQCRD A L LEU LEU 49 49 E E - SEQCRD A K LYS LYS 50 50 E E - SEQCRD A Q GLN GLN 51 51 C C - SEQCRD A Y TYR TYR 52 52 E E - SEQCRD A F PHE PHE 53 53 E E - SEQCRD A Y TYR TYR 54 54 E E - SEQCRD A E GLU GLU 55 55 E E - SEQCRD A T THR THR 56 56 E E - SEQCRD A K LYS LYS 57 57 E E - SEQCRD A C CYS CYS 58 58 E E - SEQCRD A N ASN ASN 59 59 C T 5 SEQCRD A P PRO PRO 60 60 C T 5 SEQCRD A M MET MET 61 61 C T 5 SEQCRD A G GLY GLY 62 62 C T 5 SEQCRD A Y TYR TYR 63 63 H T 5 SEQCRD A T THR THR 64 64 H T 5 SEQCRD A K LYS LYS 65 65 H T 5 SEQCRD A E GLU GLU 66 66 C T 5 SEQCRD A G GLY GLY 67 67 C T 5 SEQCRD A C CYS CYS 68 68 C T 5 SEQCRD A R ARG ARG 69 69 C T 5 SEQCRD A G GLY GLY 70 70 C T 5 SEQCRD A I ILE ILE 71 71 C B 5 SEQCRD A D ASP ASP 72 72 C T 5 SEQCRD A K LYS LYS 73 73 C T 5 SEQCRD A R ARG ARG 74 74 C T 5 SEQCRD A H HIS HIS 75 75 C T 5 SEQCRD A W TRP TRP 76 76 E E - SEQCRD A N ASN ASN 77 77 E E - SEQCRD A S SER SER 78 78 E E - SEQCRD A Q GLN GLN 79 79 E E - SEQCRD A C CYS CYS 80 80 E E - SEQCRD A R ARG ARG 81 81 E E - SEQCRD A T THR THR 82 82 E E - SEQCRD A T THR THR 83 83 E E - SEQCRD A Q GLN GLN 84 84 E E - SEQCRD A S SER SER 85 85 E E - SEQCRD A Y TYR TYR 86 86 E E - SEQCRD A V VAL VAL 87 87 E E - SEQCRD A R ARG ARG 88 88 E E - SEQCRD A A ALA ALA 89 89 E E - SEQCRD A L LEU LEU 90 90 E E - SEQCRD A T THR THR 91 91 E E - SEQCRD A M MET MET 92 92 E E - SEQCRD A D ASP ASP 93 93 C T 5 SEQCRD A S SER SER 94 94 C T 5 SEQCRD A K LYS LYS 95 95 C T 5 SEQCRD A K LYS LYS 96 96 C T 5 SEQCRD A R ARG ARG 97 97 C C - SEQCRD A I ILE ILE 98 98 E E - SEQCRD A G GLY GLY 99 99 E E - SEQCRD A W TRP TRP 100 100 E E - SEQCRD A R ARG ARG 101 101 E E - SEQCRD A F PHE PHE 102 102 E E - SEQCRD A I ILE ILE 103 103 E E - SEQCRD A R ARG ARG 104 104 E E - SEQCRD A I ILE ILE 105 105 E E - SEQCRD A D ASP ASP 106 106 E E - SEQCRD A T THR THR 107 107 E E - SEQCRD A S SER SER 108 108 E E - SEQCRD A C CYS CYS 109 109 E E - SEQCRD A V VAL VAL 110 110 E E - SEQCRD A C CYS CYS 111 111 E E - SEQCRD A T THR THR 112 112 E E - SEQCRD A L LEU LEU 113 113 E E - SEQCRD A T THR THR 114 114 E E - SEQCRD A I ILE ILE 115 115 E E - SEQCRD A K LYS LYS 116 116 C C - SEQCRD A R ARG --- 117 - - - 367 SEQCRD A G GLY --- 118 - - - 367 SEQCRD A R ARG --- 119 - - - 367 SEQCRD B Y TYR --- 1 - - - 367 SEQCRD B A ALA --- 2 - - - 367 SEQCRD B E GLU --- 3 - - - 367 SEQCRD B H HIS --- 4 - - - 367 SEQCRD B K LYS --- 5 - - - 367 SEQCRD B S SER --- 6 - - - 367 SEQCRD B H HIS --- 7 - - - 367 SEQCRD B R ARG ARG 8 8 C C - SEQCRD B G GLY GLY 9 9 C C - SEQCRD B E GLU GLU 10 10 E E - SEQCRD B V VAL VAL 11 11 E E - SEQCRD B S SER SER 12 12 E E - SEQCRD B V VAL VAL 13 13 C T 5 SEQCRD B C CYS CYS 14 14 C T 5 SEQCRD B D ASP ASP 15 15 C T 5 SEQCRD B S SER SER 16 16 E E - SEQCRD B E GLU GLU 17 17 E E - SEQCRD B S SER SER 18 18 E E - SEQCRD B L LEU LEU 19 19 E E - SEQCRD B W TRP TRP 20 20 E E - SEQCRD B V VAL VAL 21 21 E E - SEQCRD B T THR THR 22 22 C T 5 SEQCRD B D ASP ASP 23 23 C T 5 SEQCRD B K LYS LYS 24 24 C T 5 SEQCRD B S SER SER 25 25 C C - SEQCRD B S SER SER 26 26 E E - SEQCRD B A ALA ALA 27 27 E E - SEQCRD B I ILE ILE 28 28 E E - SEQCRD B D ASP ASP 29 29 C E 5 SEQCRD B I ILE ILE 30 30 C T 5 SEQCRD B R ARG ARG 31 31 C T 5 SEQCRD B G GLY GLY 32 32 C T 5 SEQCRD B H HIS HIS 33 33 C C - SEQCRD B Q GLN GLN 34 34 E E - SEQCRD B V VAL VAL 35 35 E E - SEQCRD B T THR THR 36 36 E E - SEQCRD B V VAL VAL 37 37 C E 5 SEQCRD B L LEU LEU 38 38 C C - SEQCRD B G GLY GLY 39 39 C C - SEQCRD B E GLU GLU 40 40 C E 5 SEQCRD B I ILE ILE 41 41 C E 5 SEQCRD B K LYS LYS 42 42 C T 5 SEQCRD B T THR THR 43 43 C T 5 SEQCRD B Q GLN GLN 44 44 C T 5 SEQCRD B N ASN ASN 45 45 C T 5 SEQCRD B S SER SER 46 46 C T 5 SEQCRD B P PRO PRO 47 47 C C - SEQCRD B V VAL VAL 48 48 C E 5 SEQCRD B K LYS LYS 49 49 C E 5 SEQCRD B Q GLN GLN 50 50 C C - SEQCRD B Y TYR TYR 51 51 C C - SEQCRD B F PHE PHE 52 52 E E - SEQCRD B Y TYR TYR 53 53 E E - SEQCRD B E GLU GLU 54 54 E E - SEQCRD B T THR THR 55 55 E E - SEQCRD B R ARG ARG 56 56 E E - SEQCRD B C CYS CYS 57 57 E E - SEQCRD B K LYS LYS 58 58 C T 5 SEQCRD B E GLU GLU 59 59 C T 5 SEQCRD B A ALA ALA 60 60 C T 5 SEQCRD B R ARG ARG 61 61 C T 5 SEQCRD B P PRO PRO 62 62 C T 5 SEQCRD B V VAL VAL 63 63 C B 5 SEQCRD B K LYS LYS 64 64 C T 5 SEQCRD B N ASN ASN 65 65 C T 5 SEQCRD B G GLY GLY 66 66 C B 5 SEQCRD B C CYS CYS 67 67 C T 5 SEQCRD B R ARG ARG 68 68 C T 5 SEQCRD B G GLY GLY 69 69 C T 5 SEQCRD B I ILE ILE 70 70 C B 5 SEQCRD B D ASP ASP 71 71 C T 5 SEQCRD B D ASP ASP 72 72 C T 5 SEQCRD B K LYS LYS 73 73 C T 5 SEQCRD B H HIS HIS 74 74 C T 5 SEQCRD B W TRP TRP 75 75 C T 5 SEQCRD B N ASN ASN 76 76 E E - SEQCRD B S SER SER 77 77 E E - SEQCRD B Q GLN GLN 78 78 E E - SEQCRD B C CYS CYS 79 79 E E - SEQCRD B K LYS LYS 80 80 E E - SEQCRD B T THR THR 81 81 E E - SEQCRD B S SER SER 82 82 E E - SEQCRD B Q GLN GLN 83 83 E E - SEQCRD B T THR THR 84 84 E E - SEQCRD B Y TYR TYR 85 85 E E - SEQCRD B V VAL VAL 86 86 E E - SEQCRD B R ARG ARG 87 87 E E - SEQCRD B A ALA ALA 88 88 E E - SEQCRD B L LEU LEU 89 89 E E - SEQCRD B T THR THR 90 90 E E - SEQCRD B S SER SER 91 91 C E 5 SEQCRD B E GLU GLU 92 92 C E 5 SEQCRD B N ASN ASN 93 93 C T 5 SEQCRD B N ASN ASN 94 94 C T 5 SEQCRD B K LYS LYS 95 95 C E 5 SEQCRD B L LEU LEU 96 96 C E 5 SEQCRD B V VAL VAL 97 97 C E 5 SEQCRD B G GLY GLY 98 98 E E - SEQCRD B W TRP TRP 99 99 E E - SEQCRD B R ARG ARG 100 100 E E - SEQCRD B W TRP TRP 101 101 E E - SEQCRD B I ILE ILE 102 102 E E - SEQCRD B R ARG ARG 103 103 E E - SEQCRD B I ILE ILE 104 104 E E - SEQCRD B D ASP ASP 105 105 E E - SEQCRD B T THR THR 106 106 E E - SEQCRD B S SER SER 107 107 E E - SEQCRD B C CYS CYS 108 108 E E - SEQCRD B V VAL VAL 109 109 E E - SEQCRD B C CYS CYS 110 110 E E - SEQCRD B A ALA ALA 111 111 E E - SEQCRD B L LEU LEU 112 112 E E - SEQCRD B S SER SER 113 113 E E - SEQCRD B R ARG ARG 114 114 C C - SEQCRD B K LYS LYS 115 116 C C 4 SEQCRD B I ILE --- 116 - - - 367 SEQCRD B G GLY --- 117 - - - 367 SEQCRD B R ARG --- 118 - - - 367 SEQCRD B T THR --- 119 - - - 367 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 21 No ATOM record S2CERR 4 1 SEQRES and ATOM residue numbers differ S2CERR 5 80 PDB and STRIDE secondary structures differ S2CERR 6 21 PDB secondary structure is absent S2CERR 7 21 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 2.3 PARAME R-factor 0.182 PARAME B-factor 45.8 COMMNT COMMNT Reference database information: DATABA source: DATABA SWS: BDNF_HUMAN (P23560) DATABA SWS: NT3_HUMAN (P20783) COMMNT DATABA mutation: DATABA GLN B 44 --> GLY 182 CONFLICT DATABA VAL B 11 --> TYR 149 CONFLICT DATABA GLN A 9 --> GLU 137 CONFLICT