HEADSC 2yrq COMMNT S2C correlation file created: Fri Feb 15 19:53:33 EST 2008 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT dunbrack.fccc.edu/Guoli/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD A G GLY GLY 1 1 C C - SEQCRD A S SER SER 2 2 C C - SEQCRD A S SER SER 3 3 C C - SEQCRD A G GLY GLY 4 4 C C - SEQCRD A S SER SER 5 5 C C - SEQCRD A S SER SER 6 6 C C - SEQCRD A G GLY GLY 7 7 C C - SEQCRD A M MET MET 8 8 C C - SEQCRD A G GLY GLY 9 9 C C - SEQCRD A K LYS LYS 10 10 C C - SEQCRD A G GLY GLY 11 11 C C - SEQCRD A D ASP ASP 12 12 C T 5 SEQCRD A P PRO PRO 13 13 C T 5 SEQCRD A K LYS LYS 14 14 C T 5 SEQCRD A K LYS LYS 15 15 C T 5 SEQCRD A P PRO PRO 16 16 C T 5 SEQCRD A R ARG ARG 17 17 C C - SEQCRD A G GLY GLY 18 18 C C - SEQCRD A K LYS LYS 19 19 C C - SEQCRD A M MET MET 20 20 C C - SEQCRD A S SER SER 21 21 H C 5 SEQCRD A S SER SER 22 22 H H - SEQCRD A Y TYR TYR 23 23 H H - SEQCRD A A ALA ALA 24 24 H H - SEQCRD A F PHE PHE 25 25 H H - SEQCRD A F PHE PHE 26 26 H H - SEQCRD A V VAL VAL 27 27 H H - SEQCRD A Q GLN GLN 28 28 H H - SEQCRD A T THR THR 29 29 H H - SEQCRD A C CYS CYS 30 30 H H - SEQCRD A R ARG ARG 31 31 H H - SEQCRD A E GLU GLU 32 32 H H - SEQCRD A E GLU GLU 33 33 H H - SEQCRD A H HIS HIS 34 34 H H - SEQCRD A K LYS LYS 35 35 H H - SEQCRD A K LYS LYS 36 36 H H - SEQCRD A K LYS LYS 37 37 H H - SEQCRD A H HIS HIS 38 38 H T 5 SEQCRD A P PRO PRO 39 39 C T 5 SEQCRD A D ASP ASP 40 40 C T 5 SEQCRD A A ALA ALA 41 41 C T 5 SEQCRD A S SER SER 42 42 C C - SEQCRD A V VAL VAL 43 43 C C - SEQCRD A N ASN ASN 44 44 H C 5 SEQCRD A F PHE PHE 45 45 H H - SEQCRD A S SER SER 46 46 H H - SEQCRD A E GLU GLU 47 47 H H - SEQCRD A F PHE PHE 48 48 H H - SEQCRD A S SER SER 49 49 H H - SEQCRD A K LYS LYS 50 50 H H - SEQCRD A K LYS LYS 51 51 H H - SEQCRD A C CYS CYS 52 52 H H - SEQCRD A S SER SER 53 53 H H - SEQCRD A E GLU GLU 54 54 H H - SEQCRD A R ARG ARG 55 55 H H - SEQCRD A W TRP TRP 56 56 H H - SEQCRD A K LYS LYS 57 57 H H - SEQCRD A T THR THR 58 58 H H - SEQCRD A M MET MET 59 59 H C 5 SEQCRD A S SER SER 60 60 H C 5 SEQCRD A A ALA ALA 61 61 H H - SEQCRD A K LYS LYS 62 62 H H - SEQCRD A E GLU GLU 63 63 H H - SEQCRD A K LYS LYS 64 64 H H - SEQCRD A G GLY GLY 65 65 H H - SEQCRD A K LYS LYS 66 66 H H - SEQCRD A F PHE PHE 67 67 H H - SEQCRD A E GLU GLU 68 68 H H - SEQCRD A D ASP ASP 69 69 H H - SEQCRD A M MET MET 70 70 H H - SEQCRD A A ALA ALA 71 71 H H - SEQCRD A K LYS LYS 72 72 H H - SEQCRD A A ALA ALA 73 73 H H - SEQCRD A D ASP ASP 74 74 H H - SEQCRD A K LYS LYS 75 75 H H - SEQCRD A A ALA ALA 76 76 H H - SEQCRD A R ARG ARG 77 77 H H - SEQCRD A Y TYR TYR 78 78 H H - SEQCRD A E GLU GLU 79 79 H H - SEQCRD A R ARG ARG 80 80 H H - SEQCRD A E GLU GLU 81 81 H H - SEQCRD A M MET MET 82 82 H H - SEQCRD A K LYS LYS 83 83 H H - SEQCRD A T THR THR 84 84 H H - SEQCRD A Y TYR TYR 85 85 H C 5 SEQCRD A I ILE ILE 86 86 C C - SEQCRD A P PRO PRO 87 87 C C - SEQCRD A P PRO PRO 88 88 C C - SEQCRD A K LYS LYS 89 89 C C - SEQCRD A G GLY GLY 90 90 C C - SEQCRD A E GLU GLU 91 91 C T 5 SEQCRD A T THR THR 92 92 C T 5 SEQCRD A K LYS LYS 93 93 C T 5 SEQCRD A K LYS LYS 94 94 C T 5 SEQCRD A K LYS LYS 95 95 C T 5 SEQCRD A F PHE PHE 96 96 C T 5 SEQCRD A K LYS LYS 97 97 C C - SEQCRD A D ASP ASP 98 98 C T 5 SEQCRD A P PRO PRO 99 99 C T 5 SEQCRD A N ASN ASN 100 100 C T 5 SEQCRD A A ALA ALA 101 101 C T 5 SEQCRD A P PRO PRO 102 102 C C - SEQCRD A K LYS LYS 103 103 C C - SEQCRD A R ARG ARG 104 104 C C - SEQCRD A P PRO PRO 105 105 C C - SEQCRD A P PRO PRO 106 106 C C - SEQCRD A S SER SER 107 107 H C 5 SEQCRD A A ALA ALA 108 108 H H - SEQCRD A F PHE PHE 109 109 H H - SEQCRD A F PHE PHE 110 110 H H - SEQCRD A L LEU LEU 111 111 H H - SEQCRD A F PHE PHE 112 112 H H - SEQCRD A C CYS CYS 113 113 H H - SEQCRD A S SER SER 114 114 H H - SEQCRD A E GLU GLU 115 115 H H - SEQCRD A Y TYR TYR 116 116 H H - SEQCRD A R ARG ARG 117 117 H H - SEQCRD A P PRO PRO 118 118 H H - SEQCRD A K LYS LYS 119 119 H H - SEQCRD A I ILE ILE 120 120 H H - SEQCRD A K LYS LYS 121 121 H H - SEQCRD A G GLY GLY 122 122 H H - SEQCRD A E GLU GLU 123 123 H H - SEQCRD A H HIS HIS 124 124 H T 5 SEQCRD A P PRO PRO 125 125 C T 5 SEQCRD A G GLY GLY 126 126 C T 5 SEQCRD A L LEU LEU 127 127 C T 5 SEQCRD A S SER SER 128 128 H C 5 SEQCRD A I ILE ILE 129 129 H H - SEQCRD A G GLY GLY 130 130 H H - SEQCRD A D ASP ASP 131 131 H H - SEQCRD A V VAL VAL 132 132 H H - SEQCRD A A ALA ALA 133 133 H H - SEQCRD A K LYS LYS 134 134 H H - SEQCRD A K LYS LYS 135 135 H H - SEQCRD A L LEU LEU 136 136 H H - SEQCRD A G GLY GLY 137 137 H H - SEQCRD A E GLU GLU 138 138 H H - SEQCRD A M MET MET 139 139 H H - SEQCRD A W TRP TRP 140 140 H H - SEQCRD A N ASN ASN 141 141 H H - SEQCRD A N ASN ASN 142 142 H H - SEQCRD A T THR THR 143 143 H C 5 SEQCRD A A ALA ALA 144 144 H C 5 SEQCRD A A ALA ALA 145 145 H G 5 SEQCRD A D ASP ASP 146 146 H G 5 SEQCRD A D ASP ASP 147 147 H G 5 SEQCRD A K LYS LYS 148 148 H G 5 SEQCRD A Q GLN GLN 149 149 H H - SEQCRD A P PRO PRO 150 150 H H - SEQCRD A Y TYR TYR 151 151 H H - SEQCRD A E GLU GLU 152 152 H H - SEQCRD A K LYS LYS 153 153 H H - SEQCRD A K LYS LYS 154 154 H H - SEQCRD A A ALA ALA 155 155 H H - SEQCRD A A ALA ALA 156 156 H H - SEQCRD A K LYS LYS 157 157 H H - SEQCRD A L LEU LEU 158 158 H H - SEQCRD A K LYS LYS 159 159 H H - SEQCRD A E GLU GLU 160 160 H H - SEQCRD A K LYS LYS 161 161 H H - SEQCRD A Y TYR TYR 162 162 H H - SEQCRD A E GLU GLU 163 163 H H - SEQCRD A K LYS LYS 164 164 H H - SEQCRD A D ASP ASP 165 165 H H - SEQCRD A I ILE ILE 166 166 H H - SEQCRD A A ALA ALA 167 167 H H - SEQCRD A A ALA ALA 168 168 H H - SEQCRD A Y TYR TYR 169 169 H H - SEQCRD A R ARG ARG 170 170 H H - SEQCRD A A ALA ALA 171 171 H C 5 SEQCRD A K LYS LYS 172 172 C C - SEQCRD A G GLY GLY 173 173 C C - COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 0 No ATOM record S2CERR 4 0 SEQRES and ATOM residue numbers differ S2CERR 5 37 PDB and STRIDE secondary structures differ S2CERR 6 0 PDB secondary structure is absent S2CERR 7 0 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'NMR, 20 STRUCTURES' PARAME resolution - PARAME R-factor - PARAME B-factor - COMMNT COMMNT Reference database information: DATABA source: DATABA UNP: HMGB1_HUMAN (P09429) COMMNT DATABA mutation: DATABA SER A 6 --> ? ? 'EXPRESSION TAG' DATABA SER A 3 --> ? ? 'EXPRESSION TAG' DATABA GLY A 1 --> ? ? 'EXPRESSION TAG' DATABA SER A 5 --> ? ? 'EXPRESSION TAG' DATABA GLY A 4 --> ? ? 'EXPRESSION TAG' DATABA GLY A 7 --> ? ? 'EXPRESSION TAG' DATABA SER A 2 --> ? ? 'EXPRESSION TAG'