>>1VQ4:HELIX   17  17 ARG C   27  ARG C   42  1                                  16    
RSDLIGKAVRAAQANR
Search OCA for entries with sequence similar to this one (with E=10)

HELIX 17 17 ARG C 27 ARG C 42 1 16 ATOM 66331 N ARG C 27 16.863 96.432 40.588 1.00 54.22 N ATOM 66332 CA ARG C 27 17.806 96.262 41.679 1.00 53.61 C ATOM 66333 C ARG C 27 18.366 97.619 42.112 1.00 52.72 C ATOM 66334 O ARG C 27 19.492 97.963 41.769 1.00 53.14 O ATOM 66335 CB ARG C 27 18.935 95.364 41.193 1.00 54.42 C ATOM 66336 CG ARG C 27 19.751 94.783 42.291 1.00 58.63 C ATOM 66337 CD ARG C 27 19.039 93.626 42.962 1.00 58.70 C ATOM 66338 NE ARG C 27 19.856 92.434 42.809 1.00 58.84 N ATOM 66339 CZ ARG C 27 21.056 92.283 43.357 1.00 59.13 C ATOM 66340 NH1 ARG C 27 21.580 93.243 44.111 1.00 60.26 N ATOM 66341 NH2 ARG C 27 21.753 91.190 43.116 1.00 56.83 N ATOM 66342 N SER C 28 17.593 98.385 42.872 1.00 51.01 N ATOM 66343 CA SER C 28 18.048 99.703 43.282 1.00 51.54 C ATOM 66344 C SER C 28 19.369 99.725 44.039 1.00 52.01 C ATOM 66345 O SER C 28 20.089 100.720 43.998 1.00 52.35 O ATOM 66346 CB SER C 28 16.972 100.415 44.102 1.00 51.04 C ATOM 66347 OG SER C 28 16.582 99.635 45.206 1.00 53.78 O ATOM 66348 N ASP C 29 19.706 98.647 44.733 1.00 52.04 N ATOM 66349 CA ASP C 29 20.965 98.661 45.453 1.00 51.48 C ATOM 66350 C ASP C 29 22.088 98.778 44.441 1.00 49.73 C ATOM 66351 O ASP C 29 22.971 99.612 44.585 1.00 50.26 O ATOM 66352 CB ASP C 29 21.140 97.403 46.317 1.00 54.14 C ATOM 66353 CG ASP C 29 21.233 96.132 45.501 1.00 57.52 C ATOM 66354 OD1 ASP C 29 20.273 95.832 44.764 1.00 59.83 O ATOM 66355 OD2 ASP C 29 22.263 95.427 45.603 1.00 58.62 O ATOM 66356 N LEU C 30 22.040 97.955 43.403 1.00 48.99 N ATOM 66357 CA LEU C 30 23.065 97.986 42.370 1.00 48.73 C ATOM 66358 C LEU C 30 23.082 99.302 41.610 1.00 49.00 C ATOM 66359 O LEU C 30 24.144 99.804 41.241 1.00 49.07 O ATOM 66360 CB LEU C 30 22.860 96.843 41.383 1.00 47.73 C ATOM 66361 CG LEU C 30 23.068 95.472 42.009 1.00 49.01 C ATOM 66362 CD1 LEU C 30 22.980 94.405 40.933 1.00 50.54 C ATOM 66363 CD2 LEU C 30 24.426 95.434 42.694 1.00 49.60 C ATOM 66364 N ILE C 31 21.903 99.858 41.365 1.00 48.03 N ATOM 66365 CA ILE C 31 21.832 101.112 40.649 1.00 48.43 C ATOM 66366 C ILE C 31 22.506 102.170 41.508 1.00 49.33 C ATOM 66367 O ILE C 31 23.406 102.882 41.046 1.00 48.91 O ATOM 66368 CB ILE C 31 20.377 101.493 40.364 1.00 48.14 C ATOM 66369 CG1 ILE C 31 19.738 100.424 39.471 1.00 48.16 C ATOM 66370 CG2 ILE C 31 20.318 102.838 39.685 1.00 46.96 C ATOM 66371 CD1 ILE C 31 18.272 100.643 39.198 1.00 46.66 C ATOM 66372 N GLY C 32 22.079 102.253 42.767 1.00 50.05 N ATOM 66373 CA GLY C 32 22.662 103.214 43.691 1.00 49.39 C ATOM 66374 C GLY C 32 24.185 103.172 43.656 1.00 49.16 C ATOM 66375 O GLY C 32 24.852 104.208 43.621 1.00 46.62 O ATOM 66376 N LYS C 33 24.735 101.964 43.650 1.00 48.26 N ATOM 66377 CA LYS C 33 26.174 101.797 43.621 1.00 49.18 C ATOM 66378 C LYS C 33 26.750 102.397 42.338 1.00 49.18 C ATOM 66379 O LYS C 33 27.762 103.097 42.374 1.00 49.46 O ATOM 66380 CB LYS C 33 26.532 100.307 43.729 1.00 49.90 C ATOM 66381 CG LYS C 33 28.018 100.041 43.788 1.00 53.87 C ATOM 66382 CD LYS C 33 28.354 98.590 44.125 1.00 57.97 C ATOM 66383 CE LYS C 33 29.829 98.479 44.571 1.00 59.64 C ATOM 66384 NZ LYS C 33 30.303 97.113 44.982 1.00 61.51 N ATOM 66385 N ALA C 34 26.094 102.139 41.209 1.00 48.79 N ATOM 66386 CA ALA C 34 26.559 102.650 39.920 1.00 48.89 C ATOM 66387 C ALA C 34 26.495 104.169 39.841 1.00 49.23 C ATOM 66388 O ALA C 34 27.382 104.802 39.272 1.00 49.40 O ATOM 66389 CB ALA C 34 25.750 102.037 38.787 1.00 49.29 C ATOM 66390 N VAL C 35 25.446 104.756 40.408 1.00 49.84 N ATOM 66391 CA VAL C 35 25.297 106.211 40.397 1.00 50.02 C ATOM 66392 C VAL C 35 26.285 106.872 41.364 1.00 51.32 C ATOM 66393 O VAL C 35 26.784 107.974 41.121 1.00 52.78 O ATOM 66394 CB VAL C 35 23.868 106.618 40.785 1.00 49.02 C ATOM 66395 CG1 VAL C 35 23.757 108.126 40.846 1.00 48.11 C ATOM 66396 CG2 VAL C 35 22.877 106.056 39.777 1.00 48.94 C ATOM 66397 N ARG C 36 26.565 106.186 42.464 1.00 51.31 N ATOM 66398 CA ARG C 36 27.492 106.682 43.470 1.00 49.35 C ATOM 66399 C ARG C 36 28.877 106.764 42.839 1.00 48.19 C ATOM 66400 O ARG C 36 29.609 107.731 43.037 1.00 47.76 O ATOM 66401 CB ARG C 36 27.510 105.716 44.654 1.00 50.92 C ATOM 66402 CG ARG C 36 27.875 106.324 45.982 1.00 51.77 C ATOM 66403 CD ARG C 36 27.694 105.313 47.095 1.00 51.71 C ATOM 66404 NE ARG C 36 26.289 104.939 47.236 1.00 54.75 N ATOM 66405 CZ ARG C 36 25.852 103.684 47.296 1.00 53.49 C ATOM 66406 NH1 ARG C 36 26.711 102.672 47.225 1.00 53.10 N ATOM 66407 NH2 ARG C 36 24.556 103.442 47.425 1.00 51.15 N ATOM 66408 N ALA C 37 29.226 105.746 42.065 1.00 45.85 N ATOM 66409 CA ALA C 37 30.523 105.715 41.418 1.00 45.04 C ATOM 66410 C ALA C 37 30.633 106.804 40.362 1.00 45.82 C ATOM 66411 O ALA C 37 31.625 107.526 40.298 1.00 45.07 O ATOM 66412 CB ALA C 37 30.760 104.349 40.797 1.00 43.38 C ATOM 66413 N ALA C 38 29.605 106.933 39.535 1.00 47.88 N ATOM 66414 CA ALA C 38 29.621 107.941 38.475 1.00 49.00 C ATOM 66415 C ALA C 38 29.845 109.335 39.052 1.00 48.70 C ATOM 66416 O ALA C 38 30.622 110.128 38.518 1.00 48.65 O ATOM 66417 CB ALA C 38 28.311 107.908 37.707 1.00 49.40 C ATOM 66418 N GLN C 39 29.151 109.619 40.149 1.00 47.79 N ATOM 66419 CA GLN C 39 29.251 110.905 40.807 1.00 46.40 C ATOM 66420 C GLN C 39 30.587 111.128 41.499 1.00 45.65 C ATOM 66421 O GLN C 39 31.084 112.250 41.559 1.00 45.18 O ATOM 66422 CB GLN C 39 28.129 111.050 41.816 1.00 45.57 C ATOM 66423 CG GLN C 39 26.789 111.252 41.192 1.00 47.52 C ATOM 66424 CD GLN C 39 25.703 111.276 42.227 1.00 49.93 C ATOM 66425 OE1 GLN C 39 24.658 111.909 42.044 1.00 52.95 O ATOM 66426 NE2 GLN C 39 25.934 110.576 43.329 1.00 50.64 N ATOM 66427 N ALA C 40 31.170 110.064 42.024 1.00 44.52 N ATOM 66428 CA ALA C 40 32.442 110.205 42.704 1.00 45.55 C ATOM 66429 C ALA C 40 33.561 110.412 41.703 1.00 45.84 C ATOM 66430 O ALA C 40 34.425 111.265 41.888 1.00 47.43 O ATOM 66431 CB ALA C 40 32.728 108.975 43.556 1.00 44.41 C ATOM 66432 N ASN C 41 33.532 109.638 40.631 1.00 47.00 N ATOM 66433 CA ASN C 41 34.565 109.715 39.616 1.00 47.88 C ATOM 66434 C ASN C 41 34.725 111.070 38.923 1.00 47.51 C ATOM 66435 O ASN C 41 35.747 111.326 38.287 1.00 49.47 O ATOM 66436 CB ASN C 41 34.350 108.599 38.592 1.00 50.28 C ATOM 66437 CG ASN C 41 34.409 107.219 39.227 1.00 52.19 C ATOM 66438 OD1 ASN C 41 35.344 106.911 39.962 1.00 53.98 O ATOM 66439 ND2 ASN C 41 33.413 106.384 38.949 1.00 53.04 N ATOM 66440 N ARG C 42 33.745 111.952 39.031 1.00 46.19 N ATOM 66441 CA ARG C 42 33.928 113.249 38.398 1.00 46.25 C ATOM 66442 C ARG C 42 34.344 114.342 39.391 1.00 46.78 C ATOM 66443 O ARG C 42 34.478 115.512 39.018 1.00 47.12 O ATOM 66444 CB ARG C 42 32.674 113.673 37.634 1.00 45.72 C ATOM 66445 CG ARG C 42 31.395 113.760 38.430 1.00 43.44 C ATOM 66446 CD ARG C 42 30.416 114.604 37.629 1.00 43.75 C ATOM 66447 NE ARG C 42 29.047 114.568 38.126 1.00 43.59 N ATOM 66448 CZ ARG C 42 28.222 113.542 37.955 1.00 45.25 C ATOM 66449 NH1 ARG C 42 28.630 112.458 37.295 1.00 44.48 N ATOM 66450 NH2 ARG C 42 26.988 113.603 38.440 1.00 43.59 N