>>1VQM:HELIX   18  18 ARG C   27  ARG C   42  1                                  16    
RSDLIGKAVRAAQANR
Search OCA for entries with sequence similar to this one (with E=10)

HELIX 18 18 ARG C 27 ARG C 42 1 16 ATOM 66339 N ARG C 27 16.468 95.190 40.306 1.00 55.13 N ATOM 66340 CA ARG C 27 17.424 95.094 41.401 1.00 55.11 C ATOM 66341 C ARG C 27 17.898 96.473 41.875 1.00 53.47 C ATOM 66342 O ARG C 27 18.957 96.952 41.470 1.00 52.52 O ATOM 66343 CB ARG C 27 18.618 94.274 40.941 1.00 56.01 C ATOM 66344 CG ARG C 27 19.414 93.754 42.092 1.00 61.37 C ATOM 66345 CD ARG C 27 18.702 92.589 42.732 1.00 59.43 C ATOM 66346 NE ARG C 27 19.348 91.365 42.305 1.00 59.89 N ATOM 66347 CZ ARG C 27 20.520 90.948 42.769 1.00 59.35 C ATOM 66348 NH1 ARG C 27 21.170 91.654 43.688 1.00 59.35 N ATOM 66349 NH2 ARG C 27 21.052 89.837 42.292 1.00 58.57 N ATOM 66350 N SER C 28 17.120 97.100 42.745 1.00 52.27 N ATOM 66351 CA SER C 28 17.450 98.430 43.236 1.00 53.64 C ATOM 66352 C SER C 28 18.808 98.555 43.930 1.00 54.03 C ATOM 66353 O SER C 28 19.388 99.641 43.973 1.00 54.22 O ATOM 66354 CB SER C 28 16.354 98.918 44.173 1.00 52.08 C ATOM 66355 OG SER C 28 16.257 98.048 45.281 1.00 58.65 O ATOM 66356 N ASP C 29 19.315 97.457 44.481 1.00 54.01 N ATOM 66357 CA ASP C 29 20.603 97.501 45.153 1.00 51.89 C ATOM 66358 C ASP C 29 21.713 97.555 44.116 1.00 51.18 C ATOM 66359 O ASP C 29 22.656 98.326 44.256 1.00 51.10 O ATOM 66360 CB ASP C 29 20.786 96.280 46.066 1.00 52.38 C ATOM 66361 CG ASP C 29 20.655 94.965 45.320 1.00 54.20 C ATOM 66362 OD1 ASP C 29 19.634 94.787 44.625 1.00 54.62 O ATOM 66363 OD2 ASP C 29 21.562 94.108 45.431 1.00 53.90 O ATOM 66364 N LEU C 30 21.602 96.739 43.073 1.00 49.97 N ATOM 66365 CA LEU C 30 22.620 96.726 42.036 1.00 49.21 C ATOM 66366 C LEU C 30 22.634 98.040 41.274 1.00 48.44 C ATOM 66367 O LEU C 30 23.695 98.528 40.890 1.00 47.08 O ATOM 66368 CB LEU C 30 22.397 95.563 41.068 1.00 49.84 C ATOM 66369 CG LEU C 30 22.822 94.202 41.623 1.00 51.72 C ATOM 66370 CD1 LEU C 30 22.645 93.116 40.570 1.00 51.15 C ATOM 66371 CD2 LEU C 30 24.284 94.282 42.060 1.00 53.34 C ATOM 66372 N ILE C 31 21.452 98.611 41.066 1.00 47.41 N ATOM 66373 CA ILE C 31 21.338 99.869 40.354 1.00 47.91 C ATOM 66374 C ILE C 31 22.001 100.951 41.202 1.00 48.68 C ATOM 66375 O ILE C 31 22.818 101.736 40.708 1.00 48.47 O ATOM 66376 CB ILE C 31 19.855 100.221 40.089 1.00 46.88 C ATOM 66377 CG1 ILE C 31 19.223 99.146 39.196 1.00 48.38 C ATOM 66378 CG2 ILE C 31 19.754 101.582 39.429 1.00 46.07 C ATOM 66379 CD1 ILE C 31 17.730 99.323 38.949 1.00 47.55 C ATOM 66380 N GLY C 32 21.657 100.977 42.484 1.00 48.09 N ATOM 66381 CA GLY C 32 22.247 101.948 43.387 1.00 48.26 C ATOM 66382 C GLY C 32 23.767 101.892 43.339 1.00 48.27 C ATOM 66383 O GLY C 32 24.433 102.929 43.287 1.00 49.36 O ATOM 66384 N LYS C 33 24.322 100.685 43.346 1.00 45.48 N ATOM 66385 CA LYS C 33 25.767 100.532 43.307 1.00 46.07 C ATOM 66386 C LYS C 33 26.323 101.181 42.038 1.00 46.25 C ATOM 66387 O LYS C 33 27.299 101.938 42.084 1.00 45.72 O ATOM 66388 CB LYS C 33 26.151 99.047 43.351 1.00 46.62 C ATOM 66389 CG LYS C 33 27.633 98.808 43.553 1.00 51.11 C ATOM 66390 CD LYS C 33 27.966 97.343 43.852 1.00 56.77 C ATOM 66391 CE LYS C 33 29.458 97.174 44.223 1.00 58.67 C ATOM 66392 NZ LYS C 33 29.873 95.750 44.509 1.00 60.26 N ATOM 66393 N ALA C 34 25.691 100.891 40.907 1.00 44.35 N ATOM 66394 CA ALA C 34 26.130 101.447 39.638 1.00 42.86 C ATOM 66395 C ALA C 34 26.079 102.969 39.639 1.00 41.15 C ATOM 66396 O ALA C 34 27.008 103.616 39.191 1.00 44.18 O ATOM 66397 CB ALA C 34 25.276 100.898 38.497 1.00 41.53 C ATOM 66398 N VAL C 35 24.993 103.547 40.131 1.00 41.22 N ATOM 66399 CA VAL C 35 24.877 104.999 40.150 1.00 42.37 C ATOM 66400 C VAL C 35 25.927 105.611 41.087 1.00 44.08 C ATOM 66401 O VAL C 35 26.639 106.559 40.730 1.00 44.08 O ATOM 66402 CB VAL C 35 23.453 105.413 40.565 1.00 41.48 C ATOM 66403 CG1 VAL C 35 23.388 106.902 40.833 1.00 40.19 C ATOM 66404 CG2 VAL C 35 22.472 105.032 39.452 1.00 41.13 C ATOM 66405 N ARG C 36 26.029 105.047 42.279 1.00 43.67 N ATOM 66406 CA ARG C 36 26.998 105.492 43.266 1.00 45.31 C ATOM 66407 C ARG C 36 28.398 105.554 42.624 1.00 43.85 C ATOM 66408 O ARG C 36 29.153 106.493 42.858 1.00 42.63 O ATOM 66409 CB ARG C 36 26.975 104.506 44.440 1.00 47.76 C ATOM 66410 CG ARG C 36 27.797 104.863 45.653 1.00 51.45 C ATOM 66411 CD ARG C 36 27.460 103.902 46.791 1.00 55.61 C ATOM 66412 NE ARG C 36 26.010 103.828 46.975 1.00 57.27 N ATOM 66413 CZ ARG C 36 25.315 102.694 47.038 1.00 56.70 C ATOM 66414 NH1 ARG C 36 25.928 101.520 46.943 1.00 54.31 N ATOM 66415 NH2 ARG C 36 23.996 102.739 47.157 1.00 55.39 N ATOM 66416 N ALA C 37 28.731 104.562 41.804 1.00 42.43 N ATOM 66417 CA ALA C 37 30.036 104.524 41.152 1.00 43.39 C ATOM 66418 C ALA C 37 30.227 105.586 40.056 1.00 45.43 C ATOM 66419 O ALA C 37 31.299 106.191 39.941 1.00 45.00 O ATOM 66420 CB ALA C 37 30.282 103.153 40.573 1.00 41.53 C ATOM 66421 N ALA C 38 29.202 105.804 39.240 1.00 44.70 N ATOM 66422 CA ALA C 38 29.310 106.793 38.175 1.00 45.36 C ATOM 66423 C ALA C 38 29.462 108.162 38.812 1.00 45.37 C ATOM 66424 O ALA C 38 30.221 109.007 38.335 1.00 45.21 O ATOM 66425 CB ALA C 38 28.072 106.766 37.300 1.00 43.19 C ATOM 66426 N GLN C 39 28.734 108.370 39.902 1.00 45.63 N ATOM 66427 CA GLN C 39 28.775 109.641 40.606 1.00 45.40 C ATOM 66428 C GLN C 39 30.107 109.903 41.288 1.00 45.03 C ATOM 66429 O GLN C 39 30.572 111.043 41.325 1.00 45.83 O ATOM 66430 CB GLN C 39 27.637 109.713 41.619 1.00 44.44 C ATOM 66431 CG GLN C 39 26.299 110.049 40.990 1.00 45.15 C ATOM 66432 CD GLN C 39 25.180 110.068 42.002 1.00 47.80 C ATOM 66433 OE1 GLN C 39 24.192 110.793 41.848 1.00 50.38 O ATOM 66434 NE2 GLN C 39 25.319 109.260 43.045 1.00 49.26 N ATOM 66435 N ALA C 40 30.732 108.858 41.812 1.00 42.77 N ATOM 66436 CA ALA C 40 32.014 109.031 42.479 1.00 43.08 C ATOM 66437 C ALA C 40 33.135 109.237 41.472 1.00 42.90 C ATOM 66438 O ALA C 40 34.090 109.972 41.722 1.00 45.58 O ATOM 66439 CB ALA C 40 32.331 107.816 43.351 1.00 41.20 C ATOM 66440 N ASN C 41 33.014 108.592 40.325 1.00 41.93 N ATOM 66441 CA ASN C 41 34.047 108.684 39.322 1.00 42.21 C ATOM 66442 C ASN C 41 34.246 110.029 38.627 1.00 41.16 C ATOM 66443 O ASN C 41 35.289 110.243 38.011 1.00 41.80 O ATOM 66444 CB ASN C 41 33.882 107.536 38.325 1.00 41.01 C ATOM 66445 CG ASN C 41 34.178 106.200 38.967 1.00 42.95 C ATOM 66446 OD1 ASN C 41 34.986 106.138 39.897 1.00 44.54 O ATOM 66447 ND2 ASN C 41 33.539 105.129 38.491 1.00 39.99 N ATOM 66448 N ARG C 42 33.281 110.939 38.733 1.00 39.74 N ATOM 66449 CA ARG C 42 33.459 112.260 38.135 1.00 40.58 C ATOM 66450 C ARG C 42 33.878 113.324 39.183 1.00 41.54 C ATOM 66451 O ARG C 42 34.049 114.500 38.862 1.00 40.60 O ATOM 66452 CB ARG C 42 32.194 112.710 37.399 1.00 37.67 C ATOM 66453 CG ARG C 42 30.922 112.710 38.223 1.00 37.72 C ATOM 66454 CD ARG C 42 29.880 113.565 37.528 1.00 38.46 C ATOM 66455 NE ARG C 42 28.524 113.409 38.043 1.00 39.44 N ATOM 66456 CZ ARG C 42 27.748 112.352 37.802 1.00 41.53 C ATOM 66457 NH1 ARG C 42 28.197 111.344 37.053 1.00 39.84 N ATOM 66458 NH2 ARG C 42 26.517 112.312 38.295 1.00 35.98 N