5TPY: FirstGlance in Jmol

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loadScript jsmol/j2s/J/translation/PO.js

loadScript jsmol/j2s/core/corescript.z.js

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Jmol JavaScript applet jmolApplet0__20912350647127598__ initializing

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Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__20912350647127598__)

vwrOptions:

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setting document base to "https://proteopedia.org/wiki/fgij/fg.htm?mol=5tpy"

Jmol Version: 16.2.5 2024-04-16 21:43

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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Jmol getValue bgcolor #ffd0d0

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback jmolLoadStructCallback

LOADSTRUCTCallback = "jmolLoadStructCallback"

StatusManager LOADSTRUCTcallback set f=jmolLoadStructCallback

Jmol getValue MEASURECallback fgMeasureCallback

MEASURECallback = "fgMeasureCallback"

StatusManager MEASUREcallback set f=fgMeasureCallback

Jmol getValue MESSAGECallback jmolMessageCallback

MESSAGECallback = "jmolMessageCallback"

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Jmol getValue MINIMIZATIONCallback null

Jmol getValue MODELKITCallback null

Jmol getValue PICKCallback jmolPickCallback

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Jmol getValue RESIZECallback jmolResizeCallback

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StatusManager RESIZEcallback set f=jmolResizeCallback

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Jmol getValue SELECTCallback null

Jmol getValue SERVICECallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue SYNCCallback null

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Note -- language translation disabled

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Jmol getValue load null

Jmol applet jmolApplet0__20912350647127598__ ready

script 1 started

FileManager.getAtomSetCollectionFromFile(https://proteopedia.org/wiki/fgij/localPDBFiles/1atom.pdb)

FileManager opening url https://proteopedia.org/wiki/fgij/localPDBFiles/1atom.pdb

The Resolver thinks Pdb

loadScript jsmol/j2s/core/corebio.z.js

Time for openFile(https://proteopedia.org/wiki/fgij/localPDBFiles/1atom.pdb): 205 ms

reading 1 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Babel

1 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 7 ms

zoomLarge = false

perspectiveDepth = false

loadScript jsmol/j2s/core/coretext.z.js

JSmol loading completed.

Now loading and|characterizing the structure ...