OCA:1CIR

loadScript /oca-docs/jsmol/j2s/core/package.js

loadScript /oca-docs/jsmol/j2s/core/corejmol.z.js

loadScript /oca-docs/jsmol/j2s/J/translation/PO.js

loadScript /oca-docs/jsmol/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__61968896360544__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__61968896360544__)

vwrOptions:

{ "appletReadyCallback":"Jmol._readyCallback","applet":true,"name":"jmolApplet0","syncId":"61968896360544","bgcolor":"#FFFFFF","signedApplet":"true","platform":"J.awtjs2d.Platform","display":"jmolApplet0_canvas2d","documentBase":"https://oca.weizmann.ac.il/oca-bin/ccpeek?id=1CIR","codePath":"https:/oca-docs/jsmol/j2s/","fullName":"jmolApplet0__61968896360544__","statusListener":"[J.appletjs.Jmol object]" }

setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=1CIR"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor #FFFFFF

backgroundColor = "#FFFFFF"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

StatusManager APPLETREADYcallback set f=Jmol._readyCallback

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue MODELKITCallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SELECTCallback null

Jmol getValue SERVICECallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue SYNCCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__61968896360544__ ready

script 1 started

loadScript /oca-docs/jsmol/j2s/core/coretext.z.js

Loading, please wait ...

antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1cir)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1cir

The Resolver thinks MMCif

loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/MMCifReader.js

loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/CifReader.js

loadScript /oca-docs/jsmol/j2s/JU/CifDataParser.js

loadScript /oca-docs/jsmol/j2s/core/corebio.z.js

TITLE: Towards the complete structural characterization of a protein folding pathway: the structures of the denatured, transition and native states for the association/folding of two complementary fragments of cleaved chymotrypsin inhibitor 2. Direct evidence for a nucleation-condensation mechanism

TITLE: The Structure of the Transition State for the Association of Two Fragments of the Barley Chymotrypsin Inhibitor-2 to Generate Native-Like Protein: Implications for Mechanisms of Protein Folding

TITLE: Generation of a Family of Protein Fragments for Structure-Folding Studies. 1. Folding Complementation of Two Fragments of Chymotrypsin Inhibitor-2 Formed by Cleavage at its Unique Methionine Residue

HSE = L-HOMOSERINE

Setting space group name to HM:P 1

biomolecule 1 operators 1 ASYM_IDs A,B

found biomolecule 1: A,B

1CIR

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1cir): 6225 ms

reading 20959 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

20 models in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Babel

20959 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 383 ms

HSE = L-HOMOSERINE

found biomolecule 1: A,B

1CIR

20 models

loadScript /oca-docs/jsmol/j2s/J/thread/SpinThread.js

Script completed

Jmol script terminated