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loadScript /oca-docs/jsmol/j2s/core/corejmol.z.js
loadScript /oca-docs/jsmol/j2s/J/translation/PO.js
loadScript /oca-docs/jsmol/j2s/core/corescript.z.js
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Jmol JavaScript applet jmolApplet0__134935363889125__ initializing
Jmol getValue debug null
Jmol getValue logLevel null
Jmol getValue allowjavascript null
AppletRegistry.checkIn(jmolApplet0__134935363889125__)
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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=1CXP"
(C) 2015 Jmol Development
Jmol Version: 16.2.17 2024-06-07 15:31
java.vendor: Java2Script (HTML5)
java.version: 2022-06-24 05:54:49 (JSmol/j2s)
os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
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Jmol getValue emulate null
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Jmol getValue boxbgcolor null
Jmol getValue bgcolor #FFFFFF
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Jmol getValue ANIMFRAMECallback null
Jmol getValue APPLETREADYCallback Jmol._readyCallback
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Jmol getValue ATOMMOVEDCallback null
Jmol getValue AUDIOCallback null
Jmol getValue CLICKCallback null
Jmol getValue DRAGDROPCallback null
Jmol getValue ECHOCallback null
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Jmol getValue EVALCallback null
Jmol getValue HOVERCallback null
Jmol getValue IMAGECallback null
Jmol getValue LOADSTRUCTCallback null
Jmol getValue MEASURECallback null
Jmol getValue MESSAGECallback null
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loadScript /oca-docs/jsmol/j2s/core/coretext.z.js
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antialiasDisplay = false
FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1cxp)
FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1cxp
The Resolver thinks MMCif
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loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/CifReader.js
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loadScript /oca-docs/jsmol/j2s/core/corebio.z.js
TITLE: X-ray crystal structure and characterization of halide-binding sites of human myeloperoxidase at 1.8 A resolution.
TITLE: Structure of the Green Heme in Myeloperoxidase
TITLE: 2.3 Angstrom Resolution X-Ray Crystal Structure of the Bisubstrate Analogue Inhibitor Salicylhydroxamic Acid Bound to Human Myeloperoxidase: A Model for a Prereaction Complex with Hydrogen Peroxide
TITLE: X-Ray Crystal Structure of Canine Myeloperoxidase at 3 Angstrom Resolution
TITLE: Site-Directed Mutagenesis of Human Myeloperoxidase: Further Identification of Residues Involved in Catalytic Activity and Heme Interaction
ACT = ACETATE ION
BMA = beta-D-mannopyranose
CA = CALCIUM ION
CL = CHLORIDE ION
CSO = S-HYDROXYCYSTEINE
FUC = alpha-L-fucopyranose
HEM = PROTOPORPHYRIN IX CONTAINING FE
HOH = WATER
MAN = alpha-D-mannopyranose
NAG = 2-acetamido-2-deoxy-beta-D-glucopyranose
SO4 = SULFATE ION
Setting space group name to HM:P 1 21 1
biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA
found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA
biomolecule 2 operators 1 ASYM_IDs A,B,E,G,H,I,J,K,L,M,N,O,P,Z,AA
found biomolecule 2: A,B,E,G,H,I,J,K,L,M,N,O,P,Z,AA
biomolecule 3 operators 1 ASYM_IDs C,D,F,Q,R,S,T,U,V,W,X,Y,BA,CA
found biomolecule 3: C,D,F,Q,R,S,T,U,V,W,X,Y,BA,CA
1CXP
55 bonds added
loadScript /oca-docs/jsmol/j2s/core/coresym.z.js
SpaceGroup - 0 settings generated
Precision set to 4; packing set to 0.02
Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1cxp): 4245 ms
reading 10307 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
10307 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 240 ms
TITLE: X-ray crystal structure and characterization of halide-binding sites of human myeloperoxidase at 1.8 A resolution.
TITLE: Structure of the Green Heme in Myeloperoxidase
TITLE: 2.3 Angstrom Resolution X-Ray Crystal Structure of the Bisubstrate Analogue Inhibitor Salicylhydroxamic Acid Bound to Human Myeloperoxidase: A Model for a Prereaction Complex with Hydrogen Peroxide
TITLE: X-Ray Crystal Structure of Canine Myeloperoxidase at 3 Angstrom Resolution
TITLE: Site-Directed Mutagenesis of Human Myeloperoxidase: Further Identification of Residues Involved in Catalytic Activity and Heme Interaction
ACT = ACETATE ION
BMA = beta-D-mannopyranose
CA = CALCIUM ION
CL = CHLORIDE ION
CSO = S-HYDROXYCYSTEINE
FUC = alpha-L-fucopyranose
HEM = PROTOPORPHYRIN IX CONTAINING FE
HOH = WATER
MAN = alpha-D-mannopyranose
NAG = 2-acetamido-2-deoxy-beta-D-glucopyranose
SO4 = SULFATE ION
found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA
found biomolecule 2: A,B,E,G,H,I,J,K,L,M,N,O,P,Z,AA
found biomolecule 3: C,D,F,Q,R,S,T,U,V,W,X,Y,BA,CA
1CXP
55 bonds added
Precision set to 4; packing set to 0.02
loadScript /oca-docs/jsmol/j2s/J/thread/SpinThread.js
Script completed
Jmol script terminated
spinFPS is set too fast (30) -- can't keep up!