OCA:1IGY

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=1IGY"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1igy)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1igy

The Resolver thinks MMCif

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TITLE: Crystallographic structure of an intact IgG1 monoclonal antibody.

TITLE: Crystallization of Intact Monoclonal Antibodies

BMA = beta-D-mannopyranose

FUC = alpha-L-fucopyranose

FUL = beta-L-fucopyranose

GAL = beta-D-galactopyranose

MAN = alpha-D-mannopyranose

NAG = 2-acetamido-2-deoxy-beta-D-glucopyranose

NDG = 2-acetamido-2-deoxy-alpha-D-glucopyranose

Setting space group name to HM:P 1 21 1

biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F

found biomolecule 1: A,B,C,D,E,F

1IGY

36 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1igy): 3874 ms

reading 12750 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Babel

12750 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 290 ms