OCA:1LQB

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Jmol JavaScript applet jmolApplet0__028009364584293__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__028009364584293__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=1LQB"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor #FFFFFF

backgroundColor = "#FFFFFF"

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

StatusManager APPLETREADYcallback set f=Jmol._readyCallback

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue MODELKITCallback null

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1lqb)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1lqb

The Resolver thinks MMCif

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TITLE: Structural basis for the recognition of hydroxyproline in HIF-1 alpha by pVHL.

Setting space group name to HM:P 43 21 2

HOH = WATER

HYP = 4-HYDROXYPROLINE

SO4 = SULFATE ION

1LQB

biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G,H,I

found biomolecule 1: A,B,C,D,E,F,G,H,I

biomolecule 2 operators 1,2 ASYM_IDs A,B,C,D,E,F,G,H,I

found biomolecule 2: A,B,C,D,E,F,G,H,I

assembly operator 1 x,y,z

assembly operator 2 -y+2,-x+2,-z+1/2

188 bonds added

loadScript /oca-docs/jsmol/j2s/core/coresym.z.js

SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1lqb): 1200 ms

reading 2994 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

2994 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 102 ms

TITLE: Structural basis for the recognition of hydroxyproline in HIF-1 alpha by pVHL.

HOH = WATER

HYP = 4-HYDROXYPROLINE

SO4 = SULFATE ION

1LQB

found biomolecule 1: A,B,C,D,E,F,G,H,I

found biomolecule 2: A,B,C,D,E,F,G,H,I

188 bonds added

Precision set to 4; packing set to 0.02

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Script completed

Jmol script terminated