OCA:1ML1

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JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__455365850868548__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__455365850868548__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=1ML1"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor #FFFFFF

backgroundColor = "#FFFFFF"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

StatusManager APPLETREADYcallback set f=Jmol._readyCallback

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue MODELKITCallback null

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Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1ml1)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1ml1

The Resolver thinks MMCif

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TITLE: Protein engineering with monomeric triosephosphate isomerase (monoTIM): the modelling and structure verification of a seven-residue loop.

TITLE: Active Site Properties of Monomeric Triosephosphate Isomerase (Monotim) as Deduced from Mutational and Structural Studies

TITLE: Three New Crystal Structures of Point Mutation Variants of Monotim: Conformational Flexibility of Loop-1, Loop-4 and Loop-8

TITLE: The Crystal Structure of an Engineered Monomeric Triosephosphate Isomerase, Monotim: The Correct Modelling of an Eight-Residue Loop

HOH = WATER

PGA = 2-PHOSPHOGLYCOLIC ACID

Setting space group name to HM:P 3

noncrystallographic symmetry operator 1 null

noncrystallographic symmetry operator 2 null

noncrystallographic symmetry operator 3 null

noncrystallographic symmetry operator 4 null

noncrystallographic symmetry operator 5 null

biomolecule 1 operators 1 ASYM_IDs A,B,G,H,M,N

found biomolecule 1: A,B,G,H,M,N

biomolecule 2 operators 1 ASYM_IDs C,D,I,J,O,P

found biomolecule 2: C,D,I,J,O,P

biomolecule 3 operators 1 ASYM_IDs E,F,K,L,Q,R

found biomolecule 3: E,F,K,L,Q,R

1ML1

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1ml1): 3814 ms

reading 11063 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

11063 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 275 ms

TITLE: Protein engineering with monomeric triosephosphate isomerase (monoTIM): the modelling and structure verification of a seven-residue loop.

TITLE: Active Site Properties of Monomeric Triosephosphate Isomerase (Monotim) as Deduced from Mutational and Structural Studies

TITLE: Three New Crystal Structures of Point Mutation Variants of Monotim: Conformational Flexibility of Loop-1, Loop-4 and Loop-8

TITLE: The Crystal Structure of an Engineered Monomeric Triosephosphate Isomerase, Monotim: The Correct Modelling of an Eight-Residue Loop

HOH = WATER

PGA = 2-PHOSPHOGLYCOLIC ACID

found biomolecule 1: A,B,G,H,M,N

found biomolecule 2: C,D,I,J,O,P

found biomolecule 3: E,F,K,L,Q,R

1ML1

Precision set to 4; packing set to 0.02

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Script completed

Jmol script terminated

spinFPS is set too fast (30) -- can't keep up!