OCA:1PPB

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Jmol Version: 16.2.17 2024-06-07 15:31

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FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1ppb)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1ppb

The Resolver thinks MMCif

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TITLE: The refined 1.9 A crystal structure of human alpha-thrombin: interaction with D-Phe-Pro-Arg chloromethylketone and significance of the Tyr-Pro-Pro-Trp insertion segment.

TITLE: The Refined 1.9-Angstroms Crystal Structure of D-Phe-Pro-Arg Chloromethylketone-Inhibited Human Alpha-Thrombin. Structure Analysis, Overall Structure, Electrostatic Properties, Detailed Active-Site Geometry, and Structure-Function Properties

TITLE: Electrostatic Interactions in the Association of Proteins: An Analysis of the Thrombin-Hirudin Complex

TITLE: Refined 2.3 Angstroms X-Ray Crystal Structure of Bovine Thrombin Complexes Formed with the Benzamidine and Arginine-Based Thrombin Inhibitors Napap, 4-Tapap and Mqpa. A Starting Point for Improving Anti-Thrombotics

TITLE: The Interaction of Thrombin with Fibrinogen. A Structural Basis for its Specificity

TITLE: X-Ray Crystal Structures of Human Alpha-Thrombin and of the Human Thrombin-Hirudin Complex

TITLE: The Spatial Structure of Thrombin as a Guide to its Multiple Sites of Interaction

TITLE: The Electrostatic Properties of Thrombin: Importance for Structural Stabilization and Ligand Binding

TITLE: Refined Structure of the Hirudin-Thrombin Complex

TITLE: Geometry of Binding of the Benzamidine-and Arginine-Based Inhibitors N Alpha-(2-Naphthyl-Sulphonyl-Glycyl)-Dl-P-Amidinophe

TITLE: The Structure of a Complex of Recombinant Hirudin and Human Alpha-Thrombin

TITLE: Crystal Structure of the Thrombin-Hirudin Complex: A Novel Mode of Serine Protease Inhibition

TITLE: Human D-Phe-Pro-Arg-Ch2-Alpha-Thrombin Crystallization and Diffraction Data

0G6 = D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide

HOH = WATER

Setting space group name to HM:P 21 21 21

biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E

found biomolecule 1: A,B,C,D,E

1PPB

5 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1ppb): 3346 ms

reading 2819 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

2819 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 87 ms