OCA:1Q1P

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JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__7063585155476644__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__7063585155476644__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=1Q1P"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor #FFFFFF

backgroundColor = "#FFFFFF"

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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StatusManager APPLETREADYcallback set f=Jmol._readyCallback

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Jmol getValue EVALCallback null

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Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1q1p)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1q1p

The Resolver thinks MMCif

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TITLE: Proteolytic E-cadherin activation followed by solution NMR and X-ray crystallography.

Setting space group name to HM:C 1 2 1

CA = CALCIUM ION

HOH = WATER

1Q1P

biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E

found biomolecule 1: A,B,C,D,E

biomolecule 2 operators 1,2 ASYM_IDs A,B,C,D,E

found biomolecule 2: A,B,C,D,E

assembly operator 1 x,y,z

assembly operator 2 -x,y,-z

196 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1q1p): 2001 ms

reading 1864 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

1864 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 64 ms

TITLE: Proteolytic E-cadherin activation followed by solution NMR and X-ray crystallography.

CA = CALCIUM ION

HOH = WATER

1Q1P

found biomolecule 1: A,B,C,D,E

found biomolecule 2: A,B,C,D,E

196 bonds added

Precision set to 4; packing set to 0.02

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Script completed

Jmol script terminated