OCA:1Y5V

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=1Y5V"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

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FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1y5v)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1y5v

The Resolver thinks MMCif

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TITLE: Crystal structures of tRNA-guanine transglycosylase (TGT) in complex with novel and potent inhibitors unravel pronounced induced-fit adaptations and suggest dimer formation upon substrate binding

TITLE: Synthesis, Biological Evaluation and Crystallographic Studies of Extended Guanine-based (lin-Benzoguanine) Inhibitors for tRNA-Guanine Transglycosylase (TGT)

Setting space group name to HM:C 1 2 1

GOL = GLYCEROL

HOH = WATER

NE8 = 6-AMINO-4-(2-PHENYLETHYL)-1,7-DIHYDRO-8H-IMIDAZO[4,5-G]QUINAZOLIN-8-ONE

ZN = ZINC ION

1Y5V

biomolecule 1 operators 1,2 ASYM_IDs A,B,C,D,E,F

found biomolecule 1: A,B,C,D,E,F

assembly operator 1 x,y,z

assembly operator 2 -x,y,-z

188 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=1y5v): 2147 ms

reading 3214 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Jmol

3214 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 112 ms

TITLE: Synthesis, Biological Evaluation and Crystallographic Studies of Extended Guanine-based (lin-Benzoguanine) Inhibitors for tRNA-Guanine Transglycosylase (TGT)

GOL = GLYCEROL

HOH = WATER

NE8 = 6-AMINO-4-(2-PHENYLETHYL)-1,7-DIHYDRO-8H-IMIDAZO[4,5-G]QUINAZOLIN-8-ONE

ZN = ZINC ION

1Y5V

found biomolecule 1: A,B,C,D,E,F

188 bonds added

Precision set to 4; packing set to 0.02

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