OCA:2A38

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Jmol JavaScript applet jmolApplet0__496707977242454__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__496707977242454__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=2A38"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

StatusManager APPLETREADYcallback set f=Jmol._readyCallback

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=2a38)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=2a38

The Resolver thinks MMCif

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TITLE: The Ig doublet Z1Z2: a model system for the hybrid analysis of conformational dynamics in Ig tandems from titin

TITLE: Secondary and tertiary structure elasticity of titin Z1Z2 and a titin chain model

Setting space group name to HM:P 1

CD = CADMIUM ION

HOH = WATER

2A38

biomolecule 1 operators 1 ASYM_IDs A,D,G

found biomolecule 1: A,D,G

biomolecule 2 operators 1 ASYM_IDs B,E,H

found biomolecule 2: B,E,H

biomolecule 3 operators 1 ASYM_IDs C,F,I

found biomolecule 3: C,F,I

182 bonds added

loadScript /oca-docs/jsmol/j2s/core/coresym.z.js

SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=2a38): 3165 ms

reading 4845 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

4845 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 143 ms