OCA:2D0V

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Jmol JavaScript applet jmolApplet0__317311809560647__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__317311809560647__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=2D0V"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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Jmol getValue emulate null

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Jmol getValue bgcolor #FFFFFF

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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StatusManager APPLETREADYcallback set f=Jmol._readyCallback

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Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

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Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=2d0v)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=2d0v

The Resolver thinks MMCif

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TITLE: Crystal structures of cytochrome c(L) and methanol dehydrogenase from Hyphomicrobium denitrificans: structural and mechanistic insights into interactions between the two proteins

CA = CALCIUM ION

HOH = WATER

PQQ = PYRROLOQUINOLINE QUINONE

Setting space group name to HM:C 1 2 1

biomolecule 1 operators 1,2 ASYM_IDs A,B,G,H,M,N

found biomolecule 1: A,B,G,H,M,N

biomolecule 2 operators 1 ASYM_IDs C,D,E,F,I,J,K,L,O,P,Q,R

found biomolecule 2: C,D,E,F,I,J,K,L,O,P,Q,R

assembly operator 1 x,y,z

assembly operator 2 -x,y,-z-1

2D0V

27 bonds added

loadScript /oca-docs/jsmol/j2s/core/coresym.z.js

SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=2d0v): 5179 ms

reading 16491 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

16491 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 542 ms

TITLE: Crystal structures of cytochrome c(L) and methanol dehydrogenase from Hyphomicrobium denitrificans: structural and mechanistic insights into interactions between the two proteins

CA = CALCIUM ION

HOH = WATER

PQQ = PYRROLOQUINOLINE QUINONE

found biomolecule 1: A,B,G,H,M,N

found biomolecule 2: C,D,E,F,I,J,K,L,O,P,Q,R

2D0V

27 bonds added

Precision set to 4; packing set to 0.02

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Script completed

Jmol script terminated

spinFPS is set too fast (30) -- can't keep up!