OCA:2X4Q

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Jmol JavaScript applet jmolApplet0__54912205003783__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__54912205003783__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=2X4Q"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

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Jmol getValue boxbgcolor null

Jmol getValue bgcolor #FFFFFF

backgroundColor = "#FFFFFF"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

StatusManager APPLETREADYcallback set f=Jmol._readyCallback

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue MODELKITCallback null

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=2x4q)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=2x4q

The Resolver thinks MMCif

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TITLE: Class I Major Histocompatibility Complexes Loaded by a Periodate Trigger.

TITLE: Uv-Induced Ligand Exchange in Mhc Class I Protein Crystals.

Setting space group name to HM:P 1 21 1

GOL = GLYCEROL

HOH = WATER

MES = 2-(N-MORPHOLINO)-ETHANESULFONIC ACID

MSE = SELENOMETHIONINE

PRQ = (3S)-3-amino-3-(2-nitrophenyl)propanoic acid

PRV = (2R)-amino(2-nitrophenyl)ethanoic acid

2X4Q

biomolecule 1 operators 1 ASYM_IDs D,E,F,I,J,N,O,P

found biomolecule 1: D,E,F,I,J,N,O,P

biomolecule 2 operators 1 ASYM_IDs A,B,C,G,H,K,L,M

found biomolecule 2: A,B,C,G,H,K,L,M

248 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=2x4q): 4267 ms

reading 6736 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Jmol

6736 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 203 ms