OCA:3EK7

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Jmol JavaScript applet jmolApplet0__639938969315973__ initializing

Jmol getValue debug null

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Jmol getValue allowjavascript null

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vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=3EK7"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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Jmol getValue emulate null

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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StatusManager APPLETREADYcallback set f=Jmol._readyCallback

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Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

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Jmol getValue IMAGECallback null

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=3ek7)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=3ek7

The Resolver thinks MMCif

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TITLE: Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design

TITLE: Crystallization and preliminary X-ray characterization of the genetically encoded fluorescent calcium indicator protein GCaMP2

CA = CALCIUM ION

CRO = {2-[(1R,2R)-1-amino-2-hydroxypropyl]-4-(4-hydroxybenzylidene)-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid

HOH = WATER

Setting space group name to HM:C 1 2 1

biomolecule 1 operators 1,2 ASYM_IDs A,B,C,D,E,F

found biomolecule 1: A,B,C,D,E,F

assembly operator 1 x,y,z

assembly operator 2 -x,y,-z

3EK7

30 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=3ek7): 3253 ms

reading 3333 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Jmol

3333 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 91 ms

TITLE: Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design

TITLE: Crystallization and preliminary X-ray characterization of the genetically encoded fluorescent calcium indicator protein GCaMP2

CA = CALCIUM ION

CRO = {2-[(1R,2R)-1-amino-2-hydroxypropyl]-4-(4-hydroxybenzylidene)-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid

HOH = WATER

found biomolecule 1: A,B,C,D,E,F

3EK7

30 bonds added

Precision set to 4; packing set to 0.02

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