OCA:3O3G

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JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__796292324105176__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__796292324105176__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=3O3G"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor #FFFFFF

backgroundColor = "#FFFFFF"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

StatusManager APPLETREADYcallback set f=Jmol._readyCallback

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Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue MODELKITCallback null

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Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SELECTCallback null

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Jmol getValue SYNCCallback null

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Jmol applet jmolApplet0__796292324105176__ ready

script 1 started

loadScript /oca-docs/jsmol/j2s/core/coretext.z.js

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=3o3g)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=3o3g

The Resolver thinks MMCif

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loadScript /oca-docs/jsmol/j2s/core/corebio.z.js

TITLE: Crystal Structures of RNase H2 in Complex with Nucleic Acid Reveal the Mechanism of RNA-DNA Junction Recognition and Cleavage.

Setting space group name to HM:C 1 2 1

CA = CALCIUM ION

HOH = WATER

3O3G

biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G,H,I,J,K

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K

271 bonds added

loadScript /oca-docs/jsmol/j2s/core/coresym.z.js

SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=3o3g): 3514 ms

reading 2471 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Jmol

2471 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 81 ms

TITLE: Crystal Structures of RNase H2 in Complex with Nucleic Acid Reveal the Mechanism of RNA-DNA Junction Recognition and Cleavage.

CA = CALCIUM ION

HOH = WATER

3O3G

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K

271 bonds added

Precision set to 4; packing set to 0.02

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Script completed

Jmol script terminated