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loadScript /oca-docs/jsmol/j2s/core/corejmol.z.js
loadScript /oca-docs/jsmol/j2s/J/translation/PO.js
loadScript /oca-docs/jsmol/j2s/core/corescript.z.js
JSmol exec jmolApplet0 start applet null
Jmol JavaScript applet jmolApplet0__931582758264573__ initializing
Jmol getValue debug null
Jmol getValue logLevel null
Jmol getValue allowjavascript null
AppletRegistry.checkIn(jmolApplet0__931582758264573__)
vwrOptions:
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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=3RTJ"
(C) 2015 Jmol Development
Jmol Version: 16.2.17 2024-06-07 15:31
java.vendor: Java2Script (HTML5)
java.version: 2022-06-24 05:54:49 (JSmol/j2s)
os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
Access: ALL
memory: 0.0/0.0
processors available: 1
useCommandThread: false
appletId:jmolApplet0 (signed)
Jmol getValue emulate null
defaults = "Jmol"
Jmol getValue boxbgcolor null
Jmol getValue bgcolor #FFFFFF
backgroundColor = "#FFFFFF"
Jmol getValue ANIMFRAMECallback null
Jmol getValue APPLETREADYCallback Jmol._readyCallback
APPLETREADYCallback = "Jmol._readyCallback"
StatusManager APPLETREADYcallback set f=Jmol._readyCallback
Jmol getValue ATOMMOVEDCallback null
Jmol getValue AUDIOCallback null
Jmol getValue CLICKCallback null
Jmol getValue DRAGDROPCallback null
Jmol getValue ECHOCallback null
Jmol getValue ERRORCallback null
Jmol getValue EVALCallback null
Jmol getValue HOVERCallback null
Jmol getValue IMAGECallback null
Jmol getValue LOADSTRUCTCallback null
Jmol getValue MEASURECallback null
Jmol getValue MESSAGECallback null
Jmol getValue MINIMIZATIONCallback null
Jmol getValue MODELKITCallback null
Jmol getValue PICKCallback null
Jmol getValue RESIZECallback null
Jmol getValue SCRIPTCallback null
Jmol getValue SELECTCallback null
Jmol getValue SERVICECallback null
Jmol getValue STRUCTUREMODIFIEDCallback null
Jmol getValue SYNCCallback null
Jmol getValue doTranslate null
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Jmol getValue popupMenu null
Jmol getValue script null
Jmol getValue loadInline null
Jmol getValue load null
Jmol applet jmolApplet0__931582758264573__ ready
script 1 started
loadScript /oca-docs/jsmol/j2s/core/coretext.z.js
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antialiasDisplay = false
FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=3rtj)
FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=3rtj
The Resolver thinks MMCif
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loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/CifReader.js
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loadScript /oca-docs/jsmol/j2s/core/corebio.z.js
TITLE: X-ray analysis of substrate analogs in the ricin A-chain active site.
BGC = beta-D-glucopyranose
GAL = beta-D-galactopyranose
NAG = 2-acetamido-2-deoxy-beta-D-glucopyranose
Setting space group name to HM:P 21 21 21
biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G
found biomolecule 1: A,B,C,D,E,F,G
3RTJ
11 bonds added
loadScript /oca-docs/jsmol/j2s/core/coresym.z.js
SpaceGroup - 0 settings generated
Precision set to 4; packing set to 0.02
Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=3rtj): 5825 ms
reading 4189 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
4189 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 123 ms
TITLE: X-ray analysis of substrate analogs in the ricin A-chain active site.
BGC = beta-D-glucopyranose
GAL = beta-D-galactopyranose
NAG = 2-acetamido-2-deoxy-beta-D-glucopyranose
found biomolecule 1: A,B,C,D,E,F,G
3RTJ
11 bonds added
Precision set to 4; packing set to 0.02
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Script completed
Jmol script terminated