OCA:4G7E

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Jmol JavaScript applet jmolApplet0__936461305448109__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__936461305448109__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=4G7E"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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memory: 0.0/0.0

processors available: 1

useCommandThread: false

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Jmol getValue emulate null

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Jmol getValue bgcolor #FFFFFF

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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StatusManager APPLETREADYcallback set f=Jmol._readyCallback

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Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

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Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=4g7e)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=4g7e

The Resolver thinks MMCif

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TITLE: Structural and functional studies on urease from pigeon pea (Cajanus cajan)

CME = S,S-(2-HYDROXYETHYL)THIOCYSTEINE

HOH = WATER

KCX = LYSINE NZ-CARBOXYLIC ACID

MG = MAGNESIUM ION

NI = NICKEL (II) ION

Setting space group name to HM:H 3 2

biomolecule 1 operators 1,2,3 ASYM_IDs A,B,C,D,E,F,G,H,I

found biomolecule 1: A,B,C,D,E,F,G,H,I

assembly operator 1 x,y,z

assembly operator 2 -y,x-y,z

assembly operator 3 -x+y,-x,z

4G7E

32 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=4g7e): 6163 ms

reading 13171 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

13171 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 531 ms

TITLE: Structural and functional studies on urease from pigeon pea (Cajanus cajan)

CME = S,S-(2-HYDROXYETHYL)THIOCYSTEINE

HOH = WATER

KCX = LYSINE NZ-CARBOXYLIC ACID

MG = MAGNESIUM ION

NI = NICKEL (II) ION

found biomolecule 1: A,B,C,D,E,F,G,H,I

4G7E

32 bonds added

Precision set to 4; packing set to 0.02

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Script completed

Jmol script terminated

spinFPS is set too fast (30) -- can't keep up!