OCA:4J8R

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Jmol JavaScript applet jmolApplet0__8603541438324416__ initializing

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Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__8603541438324416__)

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=4J8R"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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Jmol getValue bgcolor #FFFFFF

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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script 1 started

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FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=4j8r)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=4j8r

The Resolver thinks MMCif

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TITLE: The crystal structure of an octapeptide repeat of the Prion protein in complex with a Fab fragment of the POM2 antibody.

HOH = WATER

Setting space group name to HM:P 21 2 21

biomolecule 1 operators 1 ASYM_IDs A,B,C,G,H,I

found biomolecule 1: A,B,C,G,H,I

biomolecule 2 operators 1 ASYM_IDs D,E,F,J,K

found biomolecule 2: D,E,F,J,K

4J8R

8 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=4j8r): 7972 ms

reading 6791 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

6791 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 153 ms

TITLE: The crystal structure of an octapeptide repeat of the Prion protein in complex with a Fab fragment of the POM2 antibody.

HOH = WATER

found biomolecule 1: A,B,C,G,H,I

found biomolecule 2: D,E,F,J,K

4J8R

8 bonds added

Precision set to 4; packing set to 0.02

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Script completed

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