OCA:4OF9

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JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__27299165846267792__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__27299165846267792__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=4OF9"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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StatusManager APPLETREADYcallback set f=Jmol._readyCallback

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=4of9)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=4of9

The Resolver thinks MMCif

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loadScript /oca-docs/jsmol/j2s/core/corebio.z.js

TITLE: Structures of K42N and K42Y sperm whale myoglobins point to an inhibitory role of distal water in peroxidase activity.

Setting space group name to HM:P 6

EDO = 1,2-ETHANEDIOL

HEM = PROTOPORPHYRIN IX CONTAINING FE

HOH = WATER

SO4 = SULFATE ION

4OF9

biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G,H,I,J

found biomolecule 1: A,B,C,D,E,F,G,H,I,J

226 bonds added

loadScript /oca-docs/jsmol/j2s/core/coresym.z.js

SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=4of9): 3371 ms

reading 1649 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: ABC

Default Van der Waals type for model set to Jmol

1649 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 197 ms

TITLE: Structures of K42N and K42Y sperm whale myoglobins point to an inhibitory role of distal water in peroxidase activity.

EDO = 1,2-ETHANEDIOL

HEM = PROTOPORPHYRIN IX CONTAINING FE

HOH = WATER

SO4 = SULFATE ION

4OF9

found biomolecule 1: A,B,C,D,E,F,G,H,I,J

226 bonds added

Precision set to 4; packing set to 0.02

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Script completed

Jmol script terminated

spinFPS is set too fast (30) -- can't keep up!