OCA:5C12

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=5C12"

Jmol Version: 16.2.17 2024-06-07 15:31

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java.version: 2022-06-24 05:54:49 (JSmol/j2s)

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FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5c12)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5c12

The Resolver thinks MMCif

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TITLE: Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.

HOH = WATER

MG = MAGNESIUM ION

Setting space group name to HM:C 1 2 1

biomolecule 1 operators 1 ASYM_IDs A,B,C,D

found biomolecule 1: A,B,C,D

5C12

9 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5c12): 1943 ms

reading 3894 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Babel

3894 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 109 ms

TITLE: Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.

HOH = WATER

MG = MAGNESIUM ION

found biomolecule 1: A,B,C,D

5C12

9 bonds added

Precision set to 4; packing set to 0.02

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