loadScript /oca-docs/jsmol/j2s/core/package.js
loadScript /oca-docs/jsmol/j2s/core/corejmol.z.js
loadScript /oca-docs/jsmol/j2s/J/translation/PO.js
loadScript /oca-docs/jsmol/j2s/core/corescript.z.js
JSmol exec jmolApplet0 start applet null
Jmol JavaScript applet jmolApplet0__958544369867731__ initializing
Jmol getValue debug null
Jmol getValue logLevel null
Jmol getValue allowjavascript null
AppletRegistry.checkIn(jmolApplet0__958544369867731__)
vwrOptions:
{ "appletReadyCallback":"Jmol._readyCallback","applet":true,"name":"jmolApplet0","syncId":"958544369867731","bgcolor":"#FFFFFF","signedApplet":"true","platform":"J.awtjs2d.Platform","display":"jmolApplet0_canvas2d","documentBase":"https://oca.weizmann.ac.il/oca-bin/ccpeek?id=5IIB","codePath":"https:/oca-docs/jsmol/j2s/","fullName":"jmolApplet0__958544369867731__","statusListener":"[J.appletjs.Jmol object]" }
setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=5IIB"
(C) 2015 Jmol Development
Jmol Version: 16.2.17 2024-06-07 15:31
java.vendor: Java2Script (HTML5)
java.version: 2022-06-24 05:54:49 (JSmol/j2s)
os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
Access: ALL
memory: 0.0/0.0
processors available: 1
useCommandThread: false
appletId:jmolApplet0 (signed)
Jmol getValue emulate null
defaults = "Jmol"
Jmol getValue boxbgcolor null
Jmol getValue bgcolor #FFFFFF
backgroundColor = "#FFFFFF"
Jmol getValue ANIMFRAMECallback null
Jmol getValue APPLETREADYCallback Jmol._readyCallback
APPLETREADYCallback = "Jmol._readyCallback"
StatusManager APPLETREADYcallback set f=Jmol._readyCallback
Jmol getValue ATOMMOVEDCallback null
Jmol getValue AUDIOCallback null
Jmol getValue CLICKCallback null
Jmol getValue DRAGDROPCallback null
Jmol getValue ECHOCallback null
Jmol getValue ERRORCallback null
Jmol getValue EVALCallback null
Jmol getValue HOVERCallback null
Jmol getValue IMAGECallback null
Jmol getValue LOADSTRUCTCallback null
Jmol getValue MEASURECallback null
Jmol getValue MESSAGECallback null
Jmol getValue MINIMIZATIONCallback null
Jmol getValue MODELKITCallback null
Jmol getValue PICKCallback null
Jmol getValue RESIZECallback null
Jmol getValue SCRIPTCallback null
Jmol getValue SELECTCallback null
Jmol getValue SERVICECallback null
Jmol getValue STRUCTUREMODIFIEDCallback null
Jmol getValue SYNCCallback null
Jmol getValue doTranslate null
language=en_US
Jmol getValue popupMenu null
Jmol getValue script null
Jmol getValue loadInline null
Jmol getValue load null
Jmol applet jmolApplet0__958544369867731__ ready
script 1 started
loadScript /oca-docs/jsmol/j2s/core/coretext.z.js
Loading, please wait ...
antialiasDisplay = false
FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5iib)
FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5iib
The Resolver thinks MMCif
loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/MMCifReader.js
loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/CifReader.js
loadScript /oca-docs/jsmol/j2s/JU/CifDataParser.js
loadScript /oca-docs/jsmol/j2s/core/corebio.z.js
TITLE: Structural Basis of Egg Coat-Sperm Recognition at Fertilization.
TITLE: The molecular basis of sex: linking yeast to human.
TITLE: Rapidly evolving zona pellucida domain proteins are a major component of the vitelline envelope of abalone eggs.
TITLE: Full-length sequence of VERL, the egg vitelline envelope receptor for abalone sperm lysin.
TITLE: 1.35 and 2.07 A resolution structures of the red abalone sperm lysin monomer and dimer reveal features involved in receptor binding.
TITLE: The abalone egg vitelline envelope receptor for sperm lysin is a giant multivalent molecule.
TITLE: Crystal structure and subunit dynamics of the abalone sperm lysin dimer: egg envelopes dissociate dimers, the monomer is the active species.
TITLE: The crystal structure of lysin, a fertilization protein.
EPE = 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
FRU = beta-D-fructofuranose
GLC = alpha-D-glucopyranose
HOH = WATER
NAG = 2-acetamido-2-deoxy-beta-D-glucopyranose
Setting space group name to HM:P 31 2 1
biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G,H
found biomolecule 1: A,B,C,D,E,F,G,H
5IIB
5 bonds added
loadScript /oca-docs/jsmol/j2s/core/coresym.z.js
SpaceGroup - 0 settings generated
Precision set to 4; packing set to 0.02
Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5iib): 4264 ms
reading 4065 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
model 1.1 alternative locations: AB
Default Van der Waals type for model set to Babel
4065 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 133 ms
TITLE: Structural Basis of Egg Coat-Sperm Recognition at Fertilization.
TITLE: The molecular basis of sex: linking yeast to human.
TITLE: Rapidly evolving zona pellucida domain proteins are a major component of the vitelline envelope of abalone eggs.
TITLE: Full-length sequence of VERL, the egg vitelline envelope receptor for abalone sperm lysin.
TITLE: 1.35 and 2.07 A resolution structures of the red abalone sperm lysin monomer and dimer reveal features involved in receptor binding.
TITLE: The abalone egg vitelline envelope receptor for sperm lysin is a giant multivalent molecule.
TITLE: Crystal structure and subunit dynamics of the abalone sperm lysin dimer: egg envelopes dissociate dimers, the monomer is the active species.
TITLE: The crystal structure of lysin, a fertilization protein.
EPE = 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
FRU = beta-D-fructofuranose
GLC = alpha-D-glucopyranose
HOH = WATER
NAG = 2-acetamido-2-deoxy-beta-D-glucopyranose
found biomolecule 1: A,B,C,D,E,F,G,H
5IIB
5 bonds added
Precision set to 4; packing set to 0.02
loadScript /oca-docs/jsmol/j2s/J/thread/SpinThread.js
Script completed
Jmol script terminated