OCA:5IK7

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JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__9752906892855195__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__9752906892855195__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=5IK7"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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processors available: 1

useCommandThread: false

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Jmol getValue emulate null

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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StatusManager APPLETREADYcallback set f=Jmol._readyCallback

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Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

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Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5ik7)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5ik7

The Resolver thinks MMCif

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TITLE: Structural basis of laminin binding to the LARGE glycans on dystroglycan.

CA = CALCIUM ION

EDO = 1,2-ETHANEDIOL

FLC = CITRATE ANION

HOH = WATER

NAG = 2-acetamido-2-deoxy-beta-D-glucopyranose

Setting space group name to HM:I 21 21 21

biomolecule 1 operators 1 ASYM_IDs A,C,D,E,F,G,H,I,Q

found biomolecule 1: A,C,D,E,F,G,H,I,Q

biomolecule 2 operators 1 ASYM_IDs B,J,K,L,M,N,O,P,R

found biomolecule 2: B,J,K,L,M,N,O,P,R

5IK7

33 bonds added

loadScript /oca-docs/jsmol/j2s/core/coresym.z.js

SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5ik7): 5491 ms

reading 12145 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Babel

12145 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 262 ms