OCA:5ISZ

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JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__7583598695827867__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__7583598695827867__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=5ISZ"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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Jmol getValue emulate null

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Jmol getValue boxbgcolor null

Jmol getValue bgcolor #FFFFFF

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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Jmol getValue AUDIOCallback null

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script 1 started

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FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5isz)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5isz

The Resolver thinks MMCif

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TITLE: Broad TCR repertoire and diverse structural solutions for recognition of an immunodominant CD8(+) T cell epitope.

GOL = GLYCEROL

HOH = WATER

Setting space group name to HM:P 1 21 1

biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M

5ISZ

8 bonds added

loadScript /oca-docs/jsmol/j2s/core/coresym.z.js

SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5isz): 6612 ms

reading 13509 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Babel

13509 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 286 ms

TITLE: Broad TCR repertoire and diverse structural solutions for recognition of an immunodominant CD8(+) T cell epitope.

GOL = GLYCEROL

HOH = WATER

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M

5ISZ

8 bonds added

Precision set to 4; packing set to 0.02

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