OCA:5V5B

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Jmol Version: 16.2.17 2024-06-07 15:31

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FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5v5b)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5v5b

The Resolver thinks MMCif

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TITLE: Structure-based inhibitors of tau aggregation.

HOH = WATER

Setting space group name to HM:P 1 21 1

biomolecule 1 operators 1 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 2 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 3 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 4 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 5 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 6 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 7 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 8 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 9 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 10 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 11 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 12 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 13 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 14 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 15 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 16 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 17 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 1 operators 18 ASYM_IDs A,B

found biomolecule 1: A,B

biomolecule 2 operators 1 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 2 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 3 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 4 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 5 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 6 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 7 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 8 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 9 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 19 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 20 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 21 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 22 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 23 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 24 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 25 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 26 ASYM_IDs A,B

found biomolecule 2: A,B

biomolecule 2 operators 27 ASYM_IDs A,B

found biomolecule 2: A,B

assembly operator 1 x,y,z

assembly operator 2 x,y-4,z

assembly operator 3 x,y-3,z

assembly operator 4 x,y-2,z

assembly operator 5 x,y-1,z

assembly operator 6 x,y+1,z

assembly operator 7 x,y+2,z

assembly operator 8 x,y+3,z

assembly operator 9 x,y+4,z

assembly operator 10 -x,y-7/2,-z

assembly operator 11 -x,y-5/2,-z

assembly operator 12 -x,y-3/2,-z

assembly operator 13 -x,y-1/2,-z

assembly operator 14 -x,y+1/2,-z

assembly operator 15 -x,y+3/2,-z

assembly operator 16 -x,y+5/2,-z

assembly operator 17 -x,y+7/2,-z

assembly operator 18 -x,y+9/2,-z

assembly operator 19 -x+1,y-7/2,-z+1

assembly operator 20 -x+1,y-5/2,-z+1

assembly operator 21 -x+1,y-3/2,-z+1

assembly operator 22 -x+1,y-1/2,-z+1

assembly operator 23 -x+1,y+1/2,-z+1

assembly operator 24 -x+1,y+3/2,-z+1

assembly operator 25 -x+1,y+5/2,-z+1

assembly operator 26 -x+1,y+7/2,-z+1

assembly operator 27 -x+1,y+9/2,-z+1

5V5B

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5v5b): 3008 ms

reading 199 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Babel

199 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Jmol 16.2.17 2024-06-07 15:31 DSSP analysis for model 1.1 - 5V5B

W. Kabsch and C. Sander, Biopolymers, vol 22, 1983, pp 2577-2637

We thank Wolfgang Kabsch and Chris Sander for writing the DSSP software,

and we thank the CMBI for maintaining it to the extent that it was easy to

re-engineer in Java for our purposes.

Second generation DSSP 2.0 is used in this analysis. See Int. J. Mol. Sci. 2014, 15, 7841-7864; doi:10.3390/ijms15057841.

All bioshapes have been deleted and must be regenerated.

Note: This model contains alternative locations. Use 'CONFIGURATION 1' to be consistent with CMBI DSSP.

Time for creating model: 22 ms

TITLE: Structure-based inhibitors of tau aggregation.

HOH = WATER

found biomolecule 1: A,B

found biomolecule 2: A,B

5V5B

Precision set to 4; packing set to 0.02

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