OCA:5VCD

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Jmol JavaScript applet jmolApplet0__234019045849124__ initializing

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AppletRegistry.checkIn(jmolApplet0__234019045849124__)

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=5VCD"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5vcd)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5vcd

The Resolver thinks MMCif

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TITLE: High-Level Production and Properties of the Cysteine-Depleted Cytochrome P450 3A4.

Setting space group name to HM:I 2 2 2

GOL = GLYCEROL

HEM = PROTOPORPHYRIN IX CONTAINING FE

HOH = WATER

5VCD

biomolecule 1 operators 1,2 ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N,O

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O

biomolecule 2 operators 1,2,3,4 ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N,O

found biomolecule 2: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O

assembly operator 1 x,y,z

assembly operator 2 -x-1,-y,z

assembly operator 3 -x-1,y,-z

assembly operator 4 x,-y,-z

210 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5vcd): 3427 ms

reading 3936 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Jmol

3936 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 132 ms

TITLE: High-Level Production and Properties of the Cysteine-Depleted Cytochrome P450 3A4.

GOL = GLYCEROL

HEM = PROTOPORPHYRIN IX CONTAINING FE

HOH = WATER

5VCD

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O

found biomolecule 2: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O

210 bonds added

Precision set to 4; packing set to 0.02

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Script completed

Jmol script terminated