OCA:5VL0

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Jmol JavaScript applet jmolApplet0__5422963431179695__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__5422963431179695__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=5VL0"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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processors available: 1

useCommandThread: false

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

StatusManager APPLETREADYcallback set f=Jmol._readyCallback

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Jmol getValue DRAGDROPCallback null

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script 1 started

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5vl0)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5vl0

The Resolver thinks MMCif

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TITLE: Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis.

TITLE: Atomic-resolution structures of horse liver alcohol dehydrogenase with NAD(+) and fluoroalcohols define strained Michaelis complexes.

Setting space group name to HM:P 1 21 1

BNF = N-BENZYLFORMAMIDE

HOH = WATER

MRD = (4R)-2-METHYLPENTANE-2,4-DIOL

NAI = 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE

ZN = ZINC ION

5VL0

biomolecule 1 operators 1 ASYM_IDs A,B,E,F,G,H,I,J,K,L,M,W,X

found biomolecule 1: A,B,E,F,G,H,I,J,K,L,M,W,X

biomolecule 2 operators 1 ASYM_IDs C,D,N,O,P,Q,R,S,T,U,V,Y,Z

found biomolecule 2: C,D,N,O,P,Q,R,S,T,U,V,Y,Z

270 bonds added

loadScript /oca-docs/jsmol/j2s/core/coresym.z.js

SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=5vl0): 4060 ms

reading 12940 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Jmol

12940 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 302 ms