Jmol._Canvas2D (Jmol) "jmolApplet0"[x]
loadScript /oca-docs/jsmol/j2s/core/package.js
loadScript /oca-docs/jsmol/j2s/core/corejmol.z.js
loadScript /oca-docs/jsmol/j2s/J/translation/PO.js
loadScript /oca-docs/jsmol/j2s/core/corescript.z.js
JSmol exec jmolApplet0 start applet null
Jmol JavaScript applet jmolApplet0__7428693386793497__ initializing
Jmol getValue debug null
Jmol getValue logLevel null
Jmol getValue allowjavascript null
AppletRegistry.checkIn(jmolApplet0__7428693386793497__)
vwrOptions:
{ "appletReadyCallback":"Jmol._readyCallback","applet":true,"name":"jmolApplet0","syncId":"7428693386793497","bgcolor":"#FFFFFF","signedApplet":"true","platform":"J.awtjs2d.Platform","display":"jmolApplet0_canvas2d","documentBase":"https://oca.weizmann.ac.il/oca-bin/ccpeek?id=6BT3","codePath":"https:/oca-docs/jsmol/j2s/","fullName":"jmolApplet0__7428693386793497__","statusListener":"[J.appletjs.Jmol object]" }
setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=6BT3"
(C) 2015 Jmol Development
Jmol Version: 16.2.17 2024-06-07 15:31
java.vendor: Java2Script (HTML5)
java.version: 2022-06-24 05:54:49 (JSmol/j2s)
os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
Access: ALL
memory: 0.0/0.0
processors available: 1
useCommandThread: false
appletId:jmolApplet0 (signed)
Jmol getValue emulate null
defaults = "Jmol"
Jmol getValue boxbgcolor null
Jmol getValue bgcolor #FFFFFF
backgroundColor = "#FFFFFF"
Jmol getValue ANIMFRAMECallback null
Jmol getValue APPLETREADYCallback Jmol._readyCallback
APPLETREADYCallback = "Jmol._readyCallback"
StatusManager APPLETREADYcallback set f=Jmol._readyCallback
Jmol getValue ATOMMOVEDCallback null
Jmol getValue AUDIOCallback null
Jmol getValue CLICKCallback null
Jmol getValue DRAGDROPCallback null
Jmol getValue ECHOCallback null
Jmol getValue ERRORCallback null
Jmol getValue EVALCallback null
Jmol getValue HOVERCallback null
Jmol getValue IMAGECallback null
Jmol getValue LOADSTRUCTCallback null
Jmol getValue MEASURECallback null
Jmol getValue MESSAGECallback null
Jmol getValue MINIMIZATIONCallback null
Jmol getValue MODELKITCallback null
Jmol getValue PICKCallback null
Jmol getValue RESIZECallback null
Jmol getValue SCRIPTCallback null
Jmol getValue SELECTCallback null
Jmol getValue SERVICECallback null
Jmol getValue STRUCTUREMODIFIEDCallback null
Jmol getValue SYNCCallback null
Jmol getValue doTranslate null
language=en_US
Jmol getValue popupMenu null
Jmol getValue script null
Jmol getValue loadInline null
Jmol getValue load null
Jmol applet jmolApplet0__7428693386793497__ ready
script 1 started
loadScript /oca-docs/jsmol/j2s/core/coretext.z.js
Loading, please wait ...
antialiasDisplay = false
FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=6bt3)
FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=6bt3
The Resolver thinks MMCif
loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/MMCifReader.js
loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/CifReader.js
loadScript /oca-docs/jsmol/j2s/JU/CifDataParser.js
loadScript /oca-docs/jsmol/j2s/core/corebio.z.js
TITLE: High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitopes on Human Papillomavirus 16.
biomolecule 1 operators (1-60) ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N
found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N
biomolecule 2 operators 1 ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N
found biomolecule 2: A,B,C,D,E,F,G,H,I,J,K,L,M,N
biomolecule 3 operators (1-5) ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N
found biomolecule 3: A,B,C,D,E,F,G,H,I,J,K,L,M,N
biomolecule 4 operators (1,2,6,10,23,24) ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N
found biomolecule 4: A,B,C,D,E,F,G,H,I,J,K,L,M,N
biomolecule 5 operators P ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N
found biomolecule 5: A,B,C,D,E,F,G,H,I,J,K,L,M,N
assembly operator P null
assembly operator 1 x,y,z
assembly operator 2 null
assembly operator 3 null
assembly operator 4 null
assembly operator 5 null
assembly operator 6 null
assembly operator 7 null
assembly operator 8 null
assembly operator 9 null
assembly operator 10 null
assembly operator 11 null
assembly operator 12 null
assembly operator 13 null
assembly operator 14 null
assembly operator 15 null
assembly operator 16 null
assembly operator 17 null
assembly operator 18 null
assembly operator 19 null
assembly operator 20 null
assembly operator 21 null
assembly operator 22 null
assembly operator 23 null
assembly operator 24 null
assembly operator 25 null
assembly operator 26 null
assembly operator 27 null
assembly operator 28 null
assembly operator 29 null
assembly operator 30 null
assembly operator 31 null
assembly operator 32 null
assembly operator 33 null
assembly operator 34 null
assembly operator 35 null
assembly operator 36 null
assembly operator 37 null
assembly operator 38 null
assembly operator 39 null
assembly operator 40 null
assembly operator 41 null
assembly operator 42 null
assembly operator 43 null
assembly operator 44 null
assembly operator 45 null
assembly operator 46 null
assembly operator 47 null
assembly operator 48 null
assembly operator 49 null
assembly operator 50 null
assembly operator 51 null
assembly operator 52 null
assembly operator 53 null
assembly operator 54 null
assembly operator 55 null
assembly operator 56 null
assembly operator 57 null
assembly operator 58 null
assembly operator 59 null
assembly operator 60 null
6BT3
1 bonds added
Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=6bt3): 5713 ms
reading 35383 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
35383 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 760 ms
TITLE: High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitopes on Human Papillomavirus 16.
found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N
found biomolecule 2: A,B,C,D,E,F,G,H,I,J,K,L,M,N
found biomolecule 3: A,B,C,D,E,F,G,H,I,J,K,L,M,N
found biomolecule 4: A,B,C,D,E,F,G,H,I,J,K,L,M,N
found biomolecule 5: A,B,C,D,E,F,G,H,I,J,K,L,M,N
6BT3
1 bonds added
loadScript /oca-docs/jsmol/j2s/J/thread/SpinThread.js
Script completed
Jmol script terminated
spinFPS is set too fast (30) -- can't keep up!
| 6BT3: reference: High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitopes on Human Papillomavirus 16., Guan J, Bywaters SM, Brendle SA, Ashley RE, Makhov AM, Conway JF, Christensen ND, Hafenstein S, Viruses. 2017 Dec 6;9(12). pii: v9120374. doi: 10.3390/v9120374. PMID: 29211035 |
This OCA 
Structure page
uses Jmol,
developed by the Jmol Development Team
(documentation).