OCA:6DOX

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=6DOX"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

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FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=6dox)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=6dox

The Resolver thinks MMCif

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TITLE: Cation trafficking propels RNA hydrolysis.

Setting space group name to HM:C 1 2 1

CL = CHLORIDE ION

EDO = 1,2-ETHANEDIOL

GOL = GLYCEROL

HOH = WATER

MG = MAGNESIUM ION

PEG = DI(HYDROXYETHYL)ETHER

RB = RUBIDIUM ION

6DOX

biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA

552 bonds added

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SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=6dox): 2225 ms

reading 2509 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: ABC

Default Van der Waals type for model set to Babel

2509 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 101 ms