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loadScript /oca-docs/jsmol/j2s/core/corejmol.z.js
loadScript /oca-docs/jsmol/j2s/J/translation/PO.js
loadScript /oca-docs/jsmol/j2s/core/corescript.z.js
JSmol exec jmolApplet0 start applet null
Jmol JavaScript applet jmolApplet0__779225003814069__ initializing
Jmol getValue debug null
Jmol getValue logLevel null
Jmol getValue allowjavascript null
AppletRegistry.checkIn(jmolApplet0__779225003814069__)
vwrOptions:
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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=6S1U"
(C) 2015 Jmol Development
Jmol Version: 16.2.17 2024-06-07 15:31
java.vendor: Java2Script (HTML5)
java.version: 2022-06-24 05:54:49 (JSmol/j2s)
os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
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appletId:jmolApplet0 (signed)
Jmol getValue emulate null
defaults = "Jmol"
Jmol getValue boxbgcolor null
Jmol getValue bgcolor #FFFFFF
backgroundColor = "#FFFFFF"
Jmol getValue ANIMFRAMECallback null
Jmol getValue APPLETREADYCallback Jmol._readyCallback
APPLETREADYCallback = "Jmol._readyCallback"
StatusManager APPLETREADYcallback set f=Jmol._readyCallback
Jmol getValue ATOMMOVEDCallback null
Jmol getValue AUDIOCallback null
Jmol getValue CLICKCallback null
Jmol getValue DRAGDROPCallback null
Jmol getValue ECHOCallback null
Jmol getValue ERRORCallback null
Jmol getValue EVALCallback null
Jmol getValue HOVERCallback null
Jmol getValue IMAGECallback null
Jmol getValue LOADSTRUCTCallback null
Jmol getValue MEASURECallback null
Jmol getValue MESSAGECallback null
Jmol getValue MINIMIZATIONCallback null
Jmol getValue MODELKITCallback null
Jmol getValue PICKCallback null
Jmol getValue RESIZECallback null
Jmol getValue SCRIPTCallback null
Jmol getValue SELECTCallback null
Jmol getValue SERVICECallback null
Jmol getValue STRUCTUREMODIFIEDCallback null
Jmol getValue SYNCCallback null
Jmol getValue doTranslate null
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Jmol getValue script null
Jmol getValue loadInline null
Jmol getValue load null
Jmol applet jmolApplet0__779225003814069__ ready
script 1 started
loadScript /oca-docs/jsmol/j2s/core/coretext.z.js
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FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=6s1u)
FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=6s1u
The Resolver thinks MMCif
loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/MMCifReader.js
loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/CifReader.js
loadScript /oca-docs/jsmol/j2s/JU/CifDataParser.js
loadScript /oca-docs/jsmol/j2s/core/corebio.z.js
TITLE: Comparison of a retroviral protease in monomeric and dimeric states.
TITLE: Crystal structure of a monomeric retroviral protease solved by protein folding game players.
TITLE: High-resolution structure of a retroviral protease folded as a monomer.
TITLE: Crystal structure of a retroviral protease proves relationship to aspartic protease family.
TITLE: Conserved folding in retroviral proteases: crystal structure of a synthetic HIV-1 protease.
0A1 = O-methyl-L-tyrosine
HOH = WATER
PSA = 3-HYDROXY-4-AMINO-5-PHENYLPENTANOIC ACID
Setting space group name to HM:P 1 21 1
biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F
found biomolecule 1: A,B,C,D,E,F
6S1U
4 bonds added
loadScript /oca-docs/jsmol/j2s/core/coresym.z.js
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Precision set to 4; packing set to 0.02
Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=6s1u): 4747 ms
reading 1882 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
model 1.1 alternative locations: AB
Default Van der Waals type for model set to Jmol
1882 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 70 ms
TITLE: Comparison of a retroviral protease in monomeric and dimeric states.
TITLE: Crystal structure of a monomeric retroviral protease solved by protein folding game players.
TITLE: High-resolution structure of a retroviral protease folded as a monomer.
TITLE: Crystal structure of a retroviral protease proves relationship to aspartic protease family.
TITLE: Conserved folding in retroviral proteases: crystal structure of a synthetic HIV-1 protease.
0A1 = O-methyl-L-tyrosine
HOH = WATER
PSA = 3-HYDROXY-4-AMINO-5-PHENYLPENTANOIC ACID
found biomolecule 1: A,B,C,D,E,F
6S1U
4 bonds added
Precision set to 4; packing set to 0.02
loadScript /oca-docs/jsmol/j2s/J/thread/SpinThread.js
Script completed
Jmol script terminated