Jmol._Canvas2D (Jmol) "jmolApplet0"[x]
loadScript /oca-docs/jsmol/j2s/core/package.js
loadScript /oca-docs/jsmol/j2s/core/corejmol.z.js
loadScript /oca-docs/jsmol/j2s/J/translation/PO.js
loadScript /oca-docs/jsmol/j2s/core/corescript.z.js
JSmol exec jmolApplet0 start applet null
Jmol JavaScript applet jmolApplet0__4488205975153394__ initializing
Jmol getValue debug null
Jmol getValue logLevel null
Jmol getValue allowjavascript null
AppletRegistry.checkIn(jmolApplet0__4488205975153394__)
vwrOptions:
{ "appletReadyCallback":"Jmol._readyCallback","applet":true,"name":"jmolApplet0","syncId":"4488205975153394","bgcolor":"#FFFFFF","signedApplet":"true","platform":"J.awtjs2d.Platform","display":"jmolApplet0_canvas2d","documentBase":"https://oca.weizmann.ac.il/oca-bin/ccpeek?id=7BVF","codePath":"https:/oca-docs/jsmol/j2s/","fullName":"jmolApplet0__4488205975153394__","statusListener":"[J.appletjs.Jmol object]" }
setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=7BVF"
(C) 2015 Jmol Development
Jmol Version: 16.2.17 2024-06-07 15:31
java.vendor: Java2Script (HTML5)
java.version: 2022-06-24 05:54:49 (JSmol/j2s)
os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
Access: ALL
memory: 0.0/0.0
processors available: 1
useCommandThread: false
appletId:jmolApplet0 (signed)
Jmol getValue emulate null
defaults = "Jmol"
Jmol getValue boxbgcolor null
Jmol getValue bgcolor #FFFFFF
backgroundColor = "#FFFFFF"
Jmol getValue ANIMFRAMECallback null
Jmol getValue APPLETREADYCallback Jmol._readyCallback
APPLETREADYCallback = "Jmol._readyCallback"
StatusManager APPLETREADYcallback set f=Jmol._readyCallback
Jmol getValue ATOMMOVEDCallback null
Jmol getValue AUDIOCallback null
Jmol getValue CLICKCallback null
Jmol getValue DRAGDROPCallback null
Jmol getValue ECHOCallback null
Jmol getValue ERRORCallback null
Jmol getValue EVALCallback null
Jmol getValue HOVERCallback null
Jmol getValue IMAGECallback null
Jmol getValue LOADSTRUCTCallback null
Jmol getValue MEASURECallback null
Jmol getValue MESSAGECallback null
Jmol getValue MINIMIZATIONCallback null
Jmol getValue MODELKITCallback null
Jmol getValue PICKCallback null
Jmol getValue RESIZECallback null
Jmol getValue SCRIPTCallback null
Jmol getValue SELECTCallback null
Jmol getValue SERVICECallback null
Jmol getValue STRUCTUREMODIFIEDCallback null
Jmol getValue SYNCCallback null
Jmol getValue doTranslate null
language=en_US
Jmol getValue popupMenu null
Jmol getValue script null
Jmol getValue loadInline null
Jmol getValue load null
Jmol applet jmolApplet0__4488205975153394__ ready
script 1 started
loadScript /oca-docs/jsmol/j2s/core/coretext.z.js
Loading, please wait ...
antialiasDisplay = false
FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=7bvf)
FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=7bvf
The Resolver thinks MMCif
loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/MMCifReader.js
loadScript /oca-docs/jsmol/j2s/J/adapter/readers/cif/CifReader.js
loadScript /oca-docs/jsmol/j2s/JU/CifDataParser.js
loadScript /oca-docs/jsmol/j2s/core/corebio.z.js
TITLE: Structures of cell wall arabinosyltransferases with the anti-tuberculosis drug ethambutol.
95E = Ethambutol
CA = CALCIUM ION
CDL = CARDIOLIPIN
DSL = MONO-TRANS, OCTA-CIS DECAPRENYL-PHOSPHATE
Setting space group name to HM:P 1
biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G,H
found biomolecule 1: A,B,C,D,E,F,G,H
Setting space group name to 1
Setting space group name to Hall:P 1
7BVF
4 bonds added
Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=7bvf): 4426 ms
reading 16933 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
16933 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 345 ms
TITLE: Structures of cell wall arabinosyltransferases with the anti-tuberculosis drug ethambutol.
95E = Ethambutol
CA = CALCIUM ION
CDL = CARDIOLIPIN
DSL = MONO-TRANS, OCTA-CIS DECAPRENYL-PHOSPHATE
found biomolecule 1: A,B,C,D,E,F,G,H
7BVF
4 bonds added
loadScript /oca-docs/jsmol/j2s/core/corescriptmath.z.js
loadScript /oca-docs/jsmol/j2s/J/thread/SpinThread.js
Script completed
Jmol script terminated
spinFPS is set too fast (30) -- can't keep up!
| 7BVF: reference: Structures of cell wall arabinosyltransferases with the anti-tuberculosis drug ethambutol., Zhang L, Zhao Y, Gao Y, Wu L, Gao R, Zhang Q, Wang Y, Wu C, Wu F, Gurcha SS, Veerapen N, Batt SM, Zhao W, Qin L, Yang X, Wang M, Zhu Y, Zhang B, Bi L, Zhang X, Yang H, Guddat LW, Xu W, Wang Q, Li J, Besra GS, Rao Z, Science. 2020 Apr 23. pii: science.aba9102. doi: 10.1126/science.aba9102. PMID: 32327601 |
This OCA 
Structure page
uses Jmol,
developed by the Jmol Development Team
(documentation).